Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04263

Experiment: L-Glutamine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04262 and MPMX20_04263 are separated by 86 nucleotidesMPMX20_04263 and MPMX20_04264 are separated by 30 nucleotidesMPMX20_04264 and MPMX20_04265 overlap by 11 nucleotidesMPMX20_04265 and MPMX20_04266 are separated by 107 nucleotides MPMX20_04262: MPMX20_04262 - Acetylornithine/succinyldiaminopimelate aminotransferase, at 4,444,777 to 4,445,997 _04262 MPMX20_04263: MPMX20_04263 - Aminodeoxychorismate synthase component 2, at 4,446,084 to 4,446,647 _04263 MPMX20_04264: MPMX20_04264 - putative protein adenylyltransferase Fic, at 4,446,678 to 4,447,280 _04264 MPMX20_04265: MPMX20_04265 - putative protein YhfG, at 4,447,270 to 4,447,437 _04265 MPMX20_04266: MPMX20_04266 - Peptidyl-prolyl cis-trans isomerase A, at 4,447,545 to 4,448,117 _04266 Position (kb) 4446 4447Strain fitness (log2 ratio) -2 -1 0 1 2at 4445.087 kb on - strand, within MPMX20_04262at 4445.098 kb on + strand, within MPMX20_04262at 4445.242 kb on + strand, within MPMX20_04262at 4445.250 kb on - strand, within MPMX20_04262at 4445.300 kb on - strand, within MPMX20_04262at 4445.511 kb on + strand, within MPMX20_04262at 4445.529 kb on + strand, within MPMX20_04262at 4445.689 kb on + strand, within MPMX20_04262at 4445.788 kb on - strand, within MPMX20_04262at 4445.811 kb on + strand, within MPMX20_04262at 4445.819 kb on - strand, within MPMX20_04262at 4445.849 kb on - strand, within MPMX20_04262at 4446.118 kb on - strandat 4446.133 kb on - strandat 4446.165 kb on - strand, within MPMX20_04263at 4446.187 kb on + strand, within MPMX20_04263at 4446.221 kb on + strand, within MPMX20_04263at 4446.247 kb on - strand, within MPMX20_04263at 4446.260 kb on + strand, within MPMX20_04263at 4446.291 kb on + strand, within MPMX20_04263at 4446.303 kb on + strand, within MPMX20_04263at 4446.325 kb on - strand, within MPMX20_04263at 4446.353 kb on + strand, within MPMX20_04263at 4446.404 kb on - strand, within MPMX20_04263at 4446.405 kb on - strand, within MPMX20_04263at 4446.413 kb on - strand, within MPMX20_04263at 4446.500 kb on + strand, within MPMX20_04263at 4446.506 kb on + strand, within MPMX20_04263at 4446.531 kb on + strand, within MPMX20_04263at 4446.572 kb on + strand, within MPMX20_04263at 4446.572 kb on + strand, within MPMX20_04263at 4446.605 kb on + strandat 4446.605 kb on + strandat 4446.606 kb on - strandat 4446.683 kb on - strandat 4446.748 kb on + strand, within MPMX20_04264at 4446.791 kb on + strand, within MPMX20_04264at 4446.848 kb on + strand, within MPMX20_04264at 4446.874 kb on + strand, within MPMX20_04264at 4446.940 kb on + strand, within MPMX20_04264at 4446.959 kb on - strand, within MPMX20_04264at 4447.029 kb on - strand, within MPMX20_04264at 4447.031 kb on + strand, within MPMX20_04264at 4447.039 kb on - strand, within MPMX20_04264at 4447.107 kb on - strand, within MPMX20_04264at 4447.130 kb on + strand, within MPMX20_04264at 4447.130 kb on + strand, within MPMX20_04264at 4447.130 kb on + strand, within MPMX20_04264at 4447.130 kb on + strand, within MPMX20_04264at 4447.130 kb on + strand, within MPMX20_04264at 4447.138 kb on - strand, within MPMX20_04264at 4447.138 kb on - strand, within MPMX20_04264at 4447.138 kb on - strand, within MPMX20_04264at 4447.138 kb on - strand, within MPMX20_04264at 4447.296 kb on + strand, within MPMX20_04265at 4447.526 kb on - strandat 4447.543 kb on + strandat 4447.543 kb on + strandat 4447.551 kb on - strandat 4447.604 kb on + strand, within MPMX20_04266at 4447.604 kb on + strand, within MPMX20_04266at 4447.642 kb on + strand, within MPMX20_04266

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (C)
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4,445,087 - MPMX20_04262 0.25 -0.2
4,445,098 + MPMX20_04262 0.26 +1.4
4,445,242 + MPMX20_04262 0.38 -0.1
4,445,250 - MPMX20_04262 0.39 +0.5
4,445,300 - MPMX20_04262 0.43 +0.4
4,445,511 + MPMX20_04262 0.60 +1.3
4,445,529 + MPMX20_04262 0.62 +0.5
4,445,689 + MPMX20_04262 0.75 -1.4
4,445,788 - MPMX20_04262 0.83 +0.1
4,445,811 + MPMX20_04262 0.85 -0.7
4,445,819 - MPMX20_04262 0.85 -0.0
4,445,849 - MPMX20_04262 0.88 +1.1
4,446,118 - -1.3
4,446,133 - +0.8
4,446,165 - MPMX20_04263 0.14 -0.1
4,446,187 + MPMX20_04263 0.18 +0.0
4,446,221 + MPMX20_04263 0.24 -1.7
4,446,247 - MPMX20_04263 0.29 -0.2
4,446,260 + MPMX20_04263 0.31 -0.0
4,446,291 + MPMX20_04263 0.37 -0.7
4,446,303 + MPMX20_04263 0.39 +0.5
4,446,325 - MPMX20_04263 0.43 -0.1
4,446,353 + MPMX20_04263 0.48 +0.5
4,446,404 - MPMX20_04263 0.57 +0.2
4,446,405 - MPMX20_04263 0.57 +0.2
4,446,413 - MPMX20_04263 0.58 -0.6
4,446,500 + MPMX20_04263 0.74 +0.7
4,446,506 + MPMX20_04263 0.75 -0.5
4,446,531 + MPMX20_04263 0.79 +1.2
4,446,572 + MPMX20_04263 0.87 +0.3
4,446,572 + MPMX20_04263 0.87 -0.4
4,446,605 + -0.4
4,446,605 + +0.1
4,446,606 - -2.6
4,446,683 - -0.7
4,446,748 + MPMX20_04264 0.12 +0.7
4,446,791 + MPMX20_04264 0.19 -0.1
4,446,848 + MPMX20_04264 0.28 +1.3
4,446,874 + MPMX20_04264 0.33 -0.8
4,446,940 + MPMX20_04264 0.43 +0.3
4,446,959 - MPMX20_04264 0.47 +2.6
4,447,029 - MPMX20_04264 0.58 -1.1
4,447,031 + MPMX20_04264 0.59 +0.5
4,447,039 - MPMX20_04264 0.60 -0.0
4,447,107 - MPMX20_04264 0.71 +0.4
4,447,130 + MPMX20_04264 0.75 +0.4
4,447,130 + MPMX20_04264 0.75 +0.2
4,447,130 + MPMX20_04264 0.75 +0.9
4,447,130 + MPMX20_04264 0.75 +0.3
4,447,130 + MPMX20_04264 0.75 +0.3
4,447,138 - MPMX20_04264 0.76 -0.7
4,447,138 - MPMX20_04264 0.76 -0.4
4,447,138 - MPMX20_04264 0.76 -0.3
4,447,138 - MPMX20_04264 0.76 -0.1
4,447,296 + MPMX20_04265 0.15 -0.4
4,447,526 - +0.1
4,447,543 + +0.1
4,447,543 + -0.7
4,447,551 - -0.3
4,447,604 + MPMX20_04266 0.10 +0.1
4,447,604 + MPMX20_04266 0.10 +0.4
4,447,642 + MPMX20_04266 0.17 +0.3

Or see this region's nucleotide sequence