Experiment: L-Glutamine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_02270 and MPMX20_02271 are separated by 62 nucleotides MPMX20_02271 and MPMX20_02272 overlap by 1 nucleotides MPMX20_02272 and MPMX20_02273 are separated by 113 nucleotides
MPMX20_02270: MPMX20_02270 - Methyl-accepting chemotaxis protein I, at 2,380,722 to 2,382,446
_02270
MPMX20_02271: MPMX20_02271 - Glutaminase 2, at 2,382,509 to 2,383,435
_02271
MPMX20_02272: MPMX20_02272 - hypothetical protein, at 2,383,435 to 2,383,791
_02272
MPMX20_02273: MPMX20_02273 - hypothetical protein, at 2,383,905 to 2,385,350
_02273
Position (kb)
2382
2383
2384 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2381.520 kb on - strand, within MPMX20_02270 at 2381.599 kb on - strand, within MPMX20_02270 at 2381.609 kb on - strand, within MPMX20_02270 at 2381.646 kb on - strand, within MPMX20_02270 at 2381.660 kb on - strand, within MPMX20_02270 at 2381.688 kb on + strand, within MPMX20_02270 at 2381.746 kb on - strand, within MPMX20_02270 at 2381.749 kb on + strand, within MPMX20_02270 at 2381.837 kb on + strand, within MPMX20_02270 at 2381.840 kb on + strand, within MPMX20_02270 at 2381.840 kb on + strand, within MPMX20_02270 at 2381.866 kb on + strand, within MPMX20_02270 at 2381.866 kb on + strand, within MPMX20_02270 at 2381.920 kb on - strand, within MPMX20_02270 at 2381.923 kb on - strand, within MPMX20_02270 at 2381.995 kb on + strand, within MPMX20_02270 at 2382.016 kb on - strand, within MPMX20_02270 at 2382.172 kb on - strand, within MPMX20_02270 at 2382.187 kb on + strand, within MPMX20_02270 at 2382.195 kb on - strand, within MPMX20_02270 at 2382.280 kb on + strand at 2382.356 kb on + strand at 2382.358 kb on + strand at 2382.358 kb on + strand at 2382.376 kb on + strand at 2382.376 kb on + strand at 2382.376 kb on + strand at 2382.384 kb on - strand at 2382.451 kb on + strand at 2382.453 kb on + strand at 2382.459 kb on + strand at 2382.460 kb on - strand at 2382.461 kb on - strand at 2382.465 kb on + strand at 2382.471 kb on - strand at 2382.471 kb on - strand at 2382.489 kb on - strand at 2382.505 kb on + strand at 2382.515 kb on - strand at 2382.596 kb on + strand at 2382.608 kb on + strand, within MPMX20_02271 at 2382.616 kb on - strand, within MPMX20_02271 at 2382.616 kb on - strand, within MPMX20_02271 at 2382.621 kb on + strand, within MPMX20_02271 at 2382.723 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.727 kb on + strand, within MPMX20_02271 at 2382.731 kb on - strand, within MPMX20_02271 at 2382.745 kb on + strand, within MPMX20_02271 at 2382.796 kb on + strand, within MPMX20_02271 at 2382.796 kb on + strand, within MPMX20_02271 at 2382.805 kb on - strand, within MPMX20_02271 at 2382.832 kb on + strand, within MPMX20_02271 at 2382.832 kb on + strand, within MPMX20_02271 at 2382.839 kb on - strand, within MPMX20_02271 at 2382.839 kb on - strand, within MPMX20_02271 at 2382.840 kb on - strand, within MPMX20_02271 at 2382.906 kb on + strand, within MPMX20_02271 at 2382.910 kb on + strand, within MPMX20_02271 at 2382.922 kb on + strand, within MPMX20_02271 at 2382.940 kb on + strand, within MPMX20_02271 at 2382.990 kb on + strand, within MPMX20_02271 at 2383.021 kb on + strand, within MPMX20_02271 at 2383.113 kb on + strand, within MPMX20_02271 at 2383.113 kb on + strand, within MPMX20_02271 at 2383.121 kb on - strand, within MPMX20_02271 at 2383.123 kb on + strand, within MPMX20_02271 at 2383.148 kb on + strand, within MPMX20_02271 at 2383.148 kb on + strand, within MPMX20_02271 at 2383.314 kb on - strand, within MPMX20_02271 at 2383.347 kb on + strand at 2383.412 kb on + strand at 2383.521 kb on - strand, within MPMX20_02272 at 2383.527 kb on + strand, within MPMX20_02272 at 2383.695 kb on + strand, within MPMX20_02272 at 2383.714 kb on + strand, within MPMX20_02272 at 2383.714 kb on + strand, within MPMX20_02272 at 2383.719 kb on + strand, within MPMX20_02272 at 2383.720 kb on - strand, within MPMX20_02272 at 2383.720 kb on - strand, within MPMX20_02272 at 2383.720 kb on - strand, within MPMX20_02272 at 2383.727 kb on - strand, within MPMX20_02272 at 2383.745 kb on - strand, within MPMX20_02272 at 2383.756 kb on + strand at 2383.809 kb on - strand at 2383.835 kb on + strand at 2383.835 kb on + strand at 2383.835 kb on + strand at 2383.843 kb on - strand at 2383.853 kb on - strand at 2383.909 kb on + strand at 2383.955 kb on + strand at 2383.963 kb on - strand at 2383.963 kb on - strand at 2383.963 kb on - strand at 2383.986 kb on + strand at 2384.004 kb on - strand at 2384.021 kb on + strand at 2384.022 kb on + strand at 2384.037 kb on - strand at 2384.056 kb on + strand, within MPMX20_02273 at 2384.056 kb on + strand, within MPMX20_02273 at 2384.064 kb on - strand, within MPMX20_02273 at 2384.148 kb on + strand, within MPMX20_02273 at 2384.156 kb on - strand, within MPMX20_02273 at 2384.179 kb on + strand, within MPMX20_02273 at 2384.187 kb on - strand, within MPMX20_02273 at 2384.187 kb on - strand, within MPMX20_02273 at 2384.360 kb on - strand, within MPMX20_02273 at 2384.434 kb on + strand, within MPMX20_02273
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (C) remove 2,381,520 - MPMX20_02270 0.46 -1.3 2,381,599 - MPMX20_02270 0.51 +0.1 2,381,609 - MPMX20_02270 0.51 +0.2 2,381,646 - MPMX20_02270 0.54 +0.4 2,381,660 - MPMX20_02270 0.54 +1.5 2,381,688 + MPMX20_02270 0.56 -0.0 2,381,746 - MPMX20_02270 0.59 -0.4 2,381,749 + MPMX20_02270 0.60 +1.2 2,381,837 + MPMX20_02270 0.65 +1.2 2,381,840 + MPMX20_02270 0.65 -1.5 2,381,840 + MPMX20_02270 0.65 -0.3 2,381,866 + MPMX20_02270 0.66 -0.9 2,381,866 + MPMX20_02270 0.66 -1.2 2,381,920 - MPMX20_02270 0.69 -0.0 2,381,923 - MPMX20_02270 0.70 +0.0 2,381,995 + MPMX20_02270 0.74 +1.9 2,382,016 - MPMX20_02270 0.75 -0.5 2,382,172 - MPMX20_02270 0.84 +0.4 2,382,187 + MPMX20_02270 0.85 -0.6 2,382,195 - MPMX20_02270 0.85 -1.9 2,382,280 + +2.7 2,382,356 + -0.3 2,382,358 + -0.3 2,382,358 + -0.6 2,382,376 + +0.1 2,382,376 + -0.6 2,382,376 + +0.2 2,382,384 - -0.0 2,382,451 + -1.1 2,382,453 + -0.9 2,382,459 + -2.0 2,382,460 - -3.4 2,382,461 - -2.0 2,382,465 + -0.4 2,382,471 - -2.4 2,382,471 - -2.3 2,382,489 - -1.7 2,382,505 + -3.7 2,382,515 - -4.1 2,382,596 + -4.9 2,382,608 + MPMX20_02271 0.11 -4.3 2,382,616 - MPMX20_02271 0.12 -1.9 2,382,616 - MPMX20_02271 0.12 -4.6 2,382,621 + MPMX20_02271 0.12 -3.6 2,382,723 + MPMX20_02271 0.23 -4.8 2,382,727 + MPMX20_02271 0.24 -0.5 2,382,727 + MPMX20_02271 0.24 -5.2 2,382,727 + MPMX20_02271 0.24 -2.1 2,382,727 + MPMX20_02271 0.24 -3.3 2,382,727 + MPMX20_02271 0.24 -5.5 2,382,731 - MPMX20_02271 0.24 -4.4 2,382,745 + MPMX20_02271 0.25 -3.3 2,382,796 + MPMX20_02271 0.31 -3.4 2,382,796 + MPMX20_02271 0.31 -1.2 2,382,805 - MPMX20_02271 0.32 -4.1 2,382,832 + MPMX20_02271 0.35 -2.5 2,382,832 + MPMX20_02271 0.35 -5.1 2,382,839 - MPMX20_02271 0.36 -3.6 2,382,839 - MPMX20_02271 0.36 -2.2 2,382,840 - MPMX20_02271 0.36 -3.1 2,382,906 + MPMX20_02271 0.43 -2.9 2,382,910 + MPMX20_02271 0.43 -2.7 2,382,922 + MPMX20_02271 0.45 -2.2 2,382,940 + MPMX20_02271 0.46 -2.5 2,382,990 + MPMX20_02271 0.52 -3.9 2,383,021 + MPMX20_02271 0.55 -1.8 2,383,113 + MPMX20_02271 0.65 -4.2 2,383,113 + MPMX20_02271 0.65 -1.6 2,383,121 - MPMX20_02271 0.66 -3.9 2,383,123 + MPMX20_02271 0.66 -3.4 2,383,148 + MPMX20_02271 0.69 -1.7 2,383,148 + MPMX20_02271 0.69 -4.0 2,383,314 - MPMX20_02271 0.87 -4.0 2,383,347 + -1.2 2,383,412 + -1.8 2,383,521 - MPMX20_02272 0.24 +1.5 2,383,527 + MPMX20_02272 0.26 +0.2 2,383,695 + MPMX20_02272 0.73 -0.2 2,383,714 + MPMX20_02272 0.78 -0.7 2,383,714 + MPMX20_02272 0.78 -0.6 2,383,719 + MPMX20_02272 0.80 -0.2 2,383,720 - MPMX20_02272 0.80 +0.2 2,383,720 - MPMX20_02272 0.80 -0.4 2,383,720 - MPMX20_02272 0.80 +0.6 2,383,727 - MPMX20_02272 0.82 -0.1 2,383,745 - MPMX20_02272 0.87 +0.1 2,383,756 + -0.0 2,383,809 - +0.4 2,383,835 + -0.5 2,383,835 + -1.0 2,383,835 + -0.5 2,383,843 - +0.4 2,383,853 - -0.7 2,383,909 + +0.3 2,383,955 + -0.3 2,383,963 - -1.3 2,383,963 - -0.2 2,383,963 - -0.6 2,383,986 + -0.8 2,384,004 - +0.4 2,384,021 + -0.2 2,384,022 + +0.8 2,384,037 - -0.2 2,384,056 + MPMX20_02273 0.10 -0.9 2,384,056 + MPMX20_02273 0.10 +0.5 2,384,064 - MPMX20_02273 0.11 -0.6 2,384,148 + MPMX20_02273 0.17 +0.1 2,384,156 - MPMX20_02273 0.17 -0.5 2,384,179 + MPMX20_02273 0.19 +0.2 2,384,187 - MPMX20_02273 0.20 -0.4 2,384,187 - MPMX20_02273 0.20 -1.8 2,384,360 - MPMX20_02273 0.31 -0.1 2,384,434 + MPMX20_02273 0.37 +0.1
Or see this region's nucleotide sequence