Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_01469

Experiment: D-Xyl (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_01468 and MPMX20_01469 are separated by 11 nucleotidesMPMX20_01469 and MPMX20_01470 are separated by 23 nucleotides MPMX20_01468: MPMX20_01468 - Isoaspartyl peptidase, at 1,537,724 to 1,538,668 _01468 MPMX20_01469: MPMX20_01469 - Glutathione import ATP-binding protein GsiA, at 1,538,680 to 1,540,551 _01469 MPMX20_01470: MPMX20_01470 - Glutathione-binding protein GsiB, at 1,540,575 to 1,542,113 _01470 Position (kb) 1538 1539 1540 1541Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1537.721 kb on - strandat 1537.740 kb on - strandat 1537.776 kb on + strandat 1537.776 kb on + strandat 1537.776 kb on + strandat 1537.776 kb on + strandat 1537.776 kb on + strandat 1537.776 kb on + strandat 1537.776 kb on + strandat 1537.776 kb on + strandat 1537.781 kb on + strandat 1537.784 kb on - strandat 1537.784 kb on - strandat 1537.784 kb on - strandat 1537.784 kb on - strandat 1537.784 kb on - strandat 1537.784 kb on - strandat 1537.786 kb on + strandat 1537.786 kb on + strandat 1537.791 kb on + strandat 1537.794 kb on - strandat 1537.794 kb on - strandat 1537.794 kb on - strandat 1537.799 kb on - strandat 1537.940 kb on + strand, within MPMX20_01468at 1537.948 kb on - strand, within MPMX20_01468at 1537.954 kb on - strand, within MPMX20_01468at 1537.954 kb on - strand, within MPMX20_01468at 1538.009 kb on - strand, within MPMX20_01468at 1538.009 kb on - strand, within MPMX20_01468at 1538.024 kb on + strand, within MPMX20_01468at 1538.151 kb on - strand, within MPMX20_01468at 1538.158 kb on + strand, within MPMX20_01468at 1538.225 kb on - strand, within MPMX20_01468at 1538.262 kb on + strand, within MPMX20_01468at 1538.270 kb on - strand, within MPMX20_01468at 1538.360 kb on + strand, within MPMX20_01468at 1538.365 kb on + strand, within MPMX20_01468at 1538.492 kb on - strand, within MPMX20_01468at 1538.492 kb on - strand, within MPMX20_01468at 1538.503 kb on - strand, within MPMX20_01468at 1538.574 kb on - strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.606 kb on + strandat 1538.614 kb on - strandat 1538.614 kb on - strandat 1538.614 kb on - strandat 1538.614 kb on - strandat 1538.631 kb on - strandat 1538.631 kb on - strandat 1538.685 kb on + strandat 1538.690 kb on + strandat 1538.698 kb on - strandat 1538.705 kb on + strandat 1538.713 kb on - strandat 1538.901 kb on - strand, within MPMX20_01469at 1538.953 kb on + strand, within MPMX20_01469at 1538.971 kb on - strand, within MPMX20_01469at 1538.978 kb on - strand, within MPMX20_01469at 1538.978 kb on - strand, within MPMX20_01469at 1538.995 kb on - strand, within MPMX20_01469at 1539.078 kb on + strand, within MPMX20_01469at 1539.095 kb on + strand, within MPMX20_01469at 1539.151 kb on + strand, within MPMX20_01469at 1539.176 kb on + strand, within MPMX20_01469at 1539.368 kb on - strand, within MPMX20_01469at 1539.667 kb on - strand, within MPMX20_01469at 1539.672 kb on - strand, within MPMX20_01469at 1539.752 kb on - strand, within MPMX20_01469at 1539.794 kb on + strand, within MPMX20_01469at 1539.794 kb on + strand, within MPMX20_01469at 1539.802 kb on - strand, within MPMX20_01469at 1539.802 kb on - strand, within MPMX20_01469at 1539.802 kb on - strand, within MPMX20_01469at 1539.818 kb on + strand, within MPMX20_01469at 1539.850 kb on + strand, within MPMX20_01469at 1539.907 kb on + strand, within MPMX20_01469at 1539.917 kb on + strand, within MPMX20_01469at 1539.925 kb on - strand, within MPMX20_01469at 1539.942 kb on + strand, within MPMX20_01469at 1540.037 kb on + strand, within MPMX20_01469at 1540.048 kb on + strand, within MPMX20_01469at 1540.149 kb on - strand, within MPMX20_01469at 1540.165 kb on + strand, within MPMX20_01469at 1540.174 kb on - strand, within MPMX20_01469at 1540.273 kb on - strand, within MPMX20_01469at 1540.277 kb on + strand, within MPMX20_01469at 1540.318 kb on - strand, within MPMX20_01469at 1540.350 kb on + strand, within MPMX20_01469at 1540.350 kb on + strand, within MPMX20_01469at 1540.391 kb on + strandat 1540.490 kb on + strandat 1540.525 kb on - strandat 1540.607 kb on - strandat 1540.724 kb on + strandat 1540.750 kb on + strand, within MPMX20_01470at 1540.758 kb on - strand, within MPMX20_01470at 1540.764 kb on + strand, within MPMX20_01470at 1540.806 kb on + strand, within MPMX20_01470at 1540.806 kb on + strand, within MPMX20_01470at 1540.813 kb on - strand, within MPMX20_01470at 1540.832 kb on + strand, within MPMX20_01470at 1540.832 kb on + strand, within MPMX20_01470at 1540.833 kb on + strand, within MPMX20_01470at 1540.840 kb on + strand, within MPMX20_01470at 1540.840 kb on - strand, within MPMX20_01470at 1540.841 kb on - strand, within MPMX20_01470at 1540.841 kb on - strand, within MPMX20_01470at 1540.847 kb on + strand, within MPMX20_01470at 1540.848 kb on - strand, within MPMX20_01470at 1540.848 kb on - strand, within MPMX20_01470at 1540.855 kb on - strand, within MPMX20_01470at 1540.855 kb on - strand, within MPMX20_01470at 1540.855 kb on - strand, within MPMX20_01470at 1540.855 kb on - strand, within MPMX20_01470at 1540.904 kb on + strand, within MPMX20_01470at 1540.906 kb on - strand, within MPMX20_01470at 1540.912 kb on - strand, within MPMX20_01470at 1540.983 kb on - strand, within MPMX20_01470at 1541.125 kb on + strand, within MPMX20_01470at 1541.157 kb on - strand, within MPMX20_01470at 1541.157 kb on - strand, within MPMX20_01470at 1541.183 kb on - strand, within MPMX20_01470at 1541.191 kb on - strand, within MPMX20_01470at 1541.224 kb on + strand, within MPMX20_01470at 1541.232 kb on - strand, within MPMX20_01470at 1541.308 kb on + strand, within MPMX20_01470at 1541.344 kb on + strand, within MPMX20_01470at 1541.391 kb on - strand, within MPMX20_01470at 1541.549 kb on + strand, within MPMX20_01470

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Xyl (C)
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1,537,721 - -1.3
1,537,740 - -0.1
1,537,776 + -0.7
1,537,776 + +1.4
1,537,776 + -0.5
1,537,776 + +1.2
1,537,776 + -0.0
1,537,776 + -0.0
1,537,776 + +1.5
1,537,776 + +1.1
1,537,781 + -0.2
1,537,784 - -0.3
1,537,784 - -0.2
1,537,784 - +0.1
1,537,784 - -1.7
1,537,784 - -1.1
1,537,784 - +0.5
1,537,786 + +0.5
1,537,786 + +0.7
1,537,791 + +0.7
1,537,794 - -0.6
1,537,794 - -0.3
1,537,794 - +0.1
1,537,799 - -2.3
1,537,940 + MPMX20_01468 0.23 -0.4
1,537,948 - MPMX20_01468 0.24 +0.0
1,537,954 - MPMX20_01468 0.24 +0.6
1,537,954 - MPMX20_01468 0.24 -0.3
1,538,009 - MPMX20_01468 0.30 -0.2
1,538,009 - MPMX20_01468 0.30 -0.7
1,538,024 + MPMX20_01468 0.32 +0.2
1,538,151 - MPMX20_01468 0.45 +0.3
1,538,158 + MPMX20_01468 0.46 +0.2
1,538,225 - MPMX20_01468 0.53 -1.0
1,538,262 + MPMX20_01468 0.57 +0.2
1,538,270 - MPMX20_01468 0.58 -0.7
1,538,360 + MPMX20_01468 0.67 -0.1
1,538,365 + MPMX20_01468 0.68 -0.6
1,538,492 - MPMX20_01468 0.81 +0.6
1,538,492 - MPMX20_01468 0.81 -1.4
1,538,503 - MPMX20_01468 0.82 +0.0
1,538,574 - +3.0
1,538,606 + +0.7
1,538,606 + -0.3
1,538,606 + -0.5
1,538,606 + -0.7
1,538,606 + +0.4
1,538,606 + -0.2
1,538,606 + +0.1
1,538,606 + +0.6
1,538,606 + -2.1
1,538,606 + -0.1
1,538,606 + -0.0
1,538,614 - +1.7
1,538,614 - -1.4
1,538,614 - +0.4
1,538,614 - -3.1
1,538,631 - -0.3
1,538,631 - -0.1
1,538,685 + -0.1
1,538,690 + -1.2
1,538,698 - -2.1
1,538,705 + -2.3
1,538,713 - -1.6
1,538,901 - MPMX20_01469 0.12 -2.9
1,538,953 + MPMX20_01469 0.15 -1.1
1,538,971 - MPMX20_01469 0.16 -2.5
1,538,978 - MPMX20_01469 0.16 -2.1
1,538,978 - MPMX20_01469 0.16 -2.4
1,538,995 - MPMX20_01469 0.17 +0.3
1,539,078 + MPMX20_01469 0.21 -1.3
1,539,095 + MPMX20_01469 0.22 -2.3
1,539,151 + MPMX20_01469 0.25 -1.7
1,539,176 + MPMX20_01469 0.26 -2.5
1,539,368 - MPMX20_01469 0.37 -0.4
1,539,667 - MPMX20_01469 0.53 -0.3
1,539,672 - MPMX20_01469 0.53 -2.2
1,539,752 - MPMX20_01469 0.57 -2.2
1,539,794 + MPMX20_01469 0.60 -0.1
1,539,794 + MPMX20_01469 0.60 -2.3
1,539,802 - MPMX20_01469 0.60 -0.6
1,539,802 - MPMX20_01469 0.60 -2.5
1,539,802 - MPMX20_01469 0.60 -1.7
1,539,818 + MPMX20_01469 0.61 -0.1
1,539,850 + MPMX20_01469 0.62 -1.4
1,539,907 + MPMX20_01469 0.66 -2.0
1,539,917 + MPMX20_01469 0.66 -0.6
1,539,925 - MPMX20_01469 0.67 -2.7
1,539,942 + MPMX20_01469 0.67 -2.4
1,540,037 + MPMX20_01469 0.72 -1.5
1,540,048 + MPMX20_01469 0.73 -3.2
1,540,149 - MPMX20_01469 0.78 +0.4
1,540,165 + MPMX20_01469 0.79 -0.4
1,540,174 - MPMX20_01469 0.80 -0.4
1,540,273 - MPMX20_01469 0.85 -2.5
1,540,277 + MPMX20_01469 0.85 -0.5
1,540,318 - MPMX20_01469 0.88 -3.2
1,540,350 + MPMX20_01469 0.89 -0.8
1,540,350 + MPMX20_01469 0.89 -0.9
1,540,391 + -0.9
1,540,490 + -1.2
1,540,525 - -1.8
1,540,607 - +0.4
1,540,724 + +0.2
1,540,750 + MPMX20_01470 0.11 +0.5
1,540,758 - MPMX20_01470 0.12 -1.1
1,540,764 + MPMX20_01470 0.12 +1.5
1,540,806 + MPMX20_01470 0.15 -0.9
1,540,806 + MPMX20_01470 0.15 +0.0
1,540,813 - MPMX20_01470 0.15 +0.5
1,540,832 + MPMX20_01470 0.17 +0.3
1,540,832 + MPMX20_01470 0.17 -0.4
1,540,833 + MPMX20_01470 0.17 -0.1
1,540,840 + MPMX20_01470 0.17 -0.2
1,540,840 - MPMX20_01470 0.17 -0.3
1,540,841 - MPMX20_01470 0.17 -0.3
1,540,841 - MPMX20_01470 0.17 +0.2
1,540,847 + MPMX20_01470 0.18 +0.0
1,540,848 - MPMX20_01470 0.18 +0.0
1,540,848 - MPMX20_01470 0.18 -1.1
1,540,855 - MPMX20_01470 0.18 +1.4
1,540,855 - MPMX20_01470 0.18 -2.6
1,540,855 - MPMX20_01470 0.18 -0.0
1,540,855 - MPMX20_01470 0.18 +0.6
1,540,904 + MPMX20_01470 0.21 -1.1
1,540,906 - MPMX20_01470 0.22 -2.4
1,540,912 - MPMX20_01470 0.22 -0.8
1,540,983 - MPMX20_01470 0.27 +1.4
1,541,125 + MPMX20_01470 0.36 +0.1
1,541,157 - MPMX20_01470 0.38 -0.9
1,541,157 - MPMX20_01470 0.38 -0.2
1,541,183 - MPMX20_01470 0.40 +0.1
1,541,191 - MPMX20_01470 0.40 -1.6
1,541,224 + MPMX20_01470 0.42 -0.1
1,541,232 - MPMX20_01470 0.43 -1.7
1,541,308 + MPMX20_01470 0.48 +0.3
1,541,344 + MPMX20_01470 0.50 +1.3
1,541,391 - MPMX20_01470 0.53 -0.6
1,541,549 + MPMX20_01470 0.63 +0.3

Or see this region's nucleotide sequence