Experiment: D-Xyl (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_01468 and MPMX20_01469 are separated by 11 nucleotides MPMX20_01469 and MPMX20_01470 are separated by 23 nucleotides
MPMX20_01468: MPMX20_01468 - Isoaspartyl peptidase, at 1,537,724 to 1,538,668
_01468
MPMX20_01469: MPMX20_01469 - Glutathione import ATP-binding protein GsiA, at 1,538,680 to 1,540,551
_01469
MPMX20_01470: MPMX20_01470 - Glutathione-binding protein GsiB, at 1,540,575 to 1,542,113
_01470
Position (kb)
1538
1539
1540
1541 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1537.721 kb on - strand at 1537.740 kb on - strand at 1537.776 kb on + strand at 1537.776 kb on + strand at 1537.776 kb on + strand at 1537.776 kb on + strand at 1537.776 kb on + strand at 1537.776 kb on + strand at 1537.776 kb on + strand at 1537.776 kb on + strand at 1537.781 kb on + strand at 1537.784 kb on - strand at 1537.784 kb on - strand at 1537.784 kb on - strand at 1537.784 kb on - strand at 1537.784 kb on - strand at 1537.784 kb on - strand at 1537.786 kb on + strand at 1537.786 kb on + strand at 1537.791 kb on + strand at 1537.794 kb on - strand at 1537.794 kb on - strand at 1537.794 kb on - strand at 1537.799 kb on - strand at 1537.940 kb on + strand, within MPMX20_01468 at 1537.948 kb on - strand, within MPMX20_01468 at 1537.954 kb on - strand, within MPMX20_01468 at 1537.954 kb on - strand, within MPMX20_01468 at 1538.009 kb on - strand, within MPMX20_01468 at 1538.009 kb on - strand, within MPMX20_01468 at 1538.024 kb on + strand, within MPMX20_01468 at 1538.151 kb on - strand, within MPMX20_01468 at 1538.158 kb on + strand, within MPMX20_01468 at 1538.225 kb on - strand, within MPMX20_01468 at 1538.262 kb on + strand, within MPMX20_01468 at 1538.270 kb on - strand, within MPMX20_01468 at 1538.360 kb on + strand, within MPMX20_01468 at 1538.365 kb on + strand, within MPMX20_01468 at 1538.492 kb on - strand, within MPMX20_01468 at 1538.492 kb on - strand, within MPMX20_01468 at 1538.503 kb on - strand, within MPMX20_01468 at 1538.574 kb on - strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.606 kb on + strand at 1538.614 kb on - strand at 1538.614 kb on - strand at 1538.614 kb on - strand at 1538.614 kb on - strand at 1538.631 kb on - strand at 1538.631 kb on - strand at 1538.685 kb on + strand at 1538.690 kb on + strand at 1538.698 kb on - strand at 1538.705 kb on + strand at 1538.713 kb on - strand at 1538.901 kb on - strand, within MPMX20_01469 at 1538.953 kb on + strand, within MPMX20_01469 at 1538.971 kb on - strand, within MPMX20_01469 at 1538.978 kb on - strand, within MPMX20_01469 at 1538.978 kb on - strand, within MPMX20_01469 at 1538.995 kb on - strand, within MPMX20_01469 at 1539.078 kb on + strand, within MPMX20_01469 at 1539.095 kb on + strand, within MPMX20_01469 at 1539.151 kb on + strand, within MPMX20_01469 at 1539.176 kb on + strand, within MPMX20_01469 at 1539.368 kb on - strand, within MPMX20_01469 at 1539.667 kb on - strand, within MPMX20_01469 at 1539.672 kb on - strand, within MPMX20_01469 at 1539.752 kb on - strand, within MPMX20_01469 at 1539.794 kb on + strand, within MPMX20_01469 at 1539.794 kb on + strand, within MPMX20_01469 at 1539.802 kb on - strand, within MPMX20_01469 at 1539.802 kb on - strand, within MPMX20_01469 at 1539.802 kb on - strand, within MPMX20_01469 at 1539.818 kb on + strand, within MPMX20_01469 at 1539.850 kb on + strand, within MPMX20_01469 at 1539.907 kb on + strand, within MPMX20_01469 at 1539.917 kb on + strand, within MPMX20_01469 at 1539.925 kb on - strand, within MPMX20_01469 at 1539.942 kb on + strand, within MPMX20_01469 at 1540.037 kb on + strand, within MPMX20_01469 at 1540.048 kb on + strand, within MPMX20_01469 at 1540.149 kb on - strand, within MPMX20_01469 at 1540.165 kb on + strand, within MPMX20_01469 at 1540.174 kb on - strand, within MPMX20_01469 at 1540.273 kb on - strand, within MPMX20_01469 at 1540.277 kb on + strand, within MPMX20_01469 at 1540.318 kb on - strand, within MPMX20_01469 at 1540.350 kb on + strand, within MPMX20_01469 at 1540.350 kb on + strand, within MPMX20_01469 at 1540.391 kb on + strand at 1540.490 kb on + strand at 1540.525 kb on - strand at 1540.607 kb on - strand at 1540.724 kb on + strand at 1540.750 kb on + strand, within MPMX20_01470 at 1540.758 kb on - strand, within MPMX20_01470 at 1540.764 kb on + strand, within MPMX20_01470 at 1540.806 kb on + strand, within MPMX20_01470 at 1540.806 kb on + strand, within MPMX20_01470 at 1540.813 kb on - strand, within MPMX20_01470 at 1540.832 kb on + strand, within MPMX20_01470 at 1540.832 kb on + strand, within MPMX20_01470 at 1540.833 kb on + strand, within MPMX20_01470 at 1540.840 kb on + strand, within MPMX20_01470 at 1540.840 kb on - strand, within MPMX20_01470 at 1540.841 kb on - strand, within MPMX20_01470 at 1540.841 kb on - strand, within MPMX20_01470 at 1540.847 kb on + strand, within MPMX20_01470 at 1540.848 kb on - strand, within MPMX20_01470 at 1540.848 kb on - strand, within MPMX20_01470 at 1540.855 kb on - strand, within MPMX20_01470 at 1540.855 kb on - strand, within MPMX20_01470 at 1540.855 kb on - strand, within MPMX20_01470 at 1540.855 kb on - strand, within MPMX20_01470 at 1540.904 kb on + strand, within MPMX20_01470 at 1540.906 kb on - strand, within MPMX20_01470 at 1540.912 kb on - strand, within MPMX20_01470 at 1540.983 kb on - strand, within MPMX20_01470 at 1541.125 kb on + strand, within MPMX20_01470 at 1541.157 kb on - strand, within MPMX20_01470 at 1541.157 kb on - strand, within MPMX20_01470 at 1541.183 kb on - strand, within MPMX20_01470 at 1541.191 kb on - strand, within MPMX20_01470 at 1541.224 kb on + strand, within MPMX20_01470 at 1541.232 kb on - strand, within MPMX20_01470 at 1541.308 kb on + strand, within MPMX20_01470 at 1541.344 kb on + strand, within MPMX20_01470 at 1541.391 kb on - strand, within MPMX20_01470 at 1541.549 kb on + strand, within MPMX20_01470
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xyl (C) remove 1,537,721 - -1.3 1,537,740 - -0.1 1,537,776 + -0.7 1,537,776 + +1.4 1,537,776 + -0.5 1,537,776 + +1.2 1,537,776 + -0.0 1,537,776 + -0.0 1,537,776 + +1.5 1,537,776 + +1.1 1,537,781 + -0.2 1,537,784 - -0.3 1,537,784 - -0.2 1,537,784 - +0.1 1,537,784 - -1.7 1,537,784 - -1.1 1,537,784 - +0.5 1,537,786 + +0.5 1,537,786 + +0.7 1,537,791 + +0.7 1,537,794 - -0.6 1,537,794 - -0.3 1,537,794 - +0.1 1,537,799 - -2.3 1,537,940 + MPMX20_01468 0.23 -0.4 1,537,948 - MPMX20_01468 0.24 +0.0 1,537,954 - MPMX20_01468 0.24 +0.6 1,537,954 - MPMX20_01468 0.24 -0.3 1,538,009 - MPMX20_01468 0.30 -0.2 1,538,009 - MPMX20_01468 0.30 -0.7 1,538,024 + MPMX20_01468 0.32 +0.2 1,538,151 - MPMX20_01468 0.45 +0.3 1,538,158 + MPMX20_01468 0.46 +0.2 1,538,225 - MPMX20_01468 0.53 -1.0 1,538,262 + MPMX20_01468 0.57 +0.2 1,538,270 - MPMX20_01468 0.58 -0.7 1,538,360 + MPMX20_01468 0.67 -0.1 1,538,365 + MPMX20_01468 0.68 -0.6 1,538,492 - MPMX20_01468 0.81 +0.6 1,538,492 - MPMX20_01468 0.81 -1.4 1,538,503 - MPMX20_01468 0.82 +0.0 1,538,574 - +3.0 1,538,606 + +0.7 1,538,606 + -0.3 1,538,606 + -0.5 1,538,606 + -0.7 1,538,606 + +0.4 1,538,606 + -0.2 1,538,606 + +0.1 1,538,606 + +0.6 1,538,606 + -2.1 1,538,606 + -0.1 1,538,606 + -0.0 1,538,614 - +1.7 1,538,614 - -1.4 1,538,614 - +0.4 1,538,614 - -3.1 1,538,631 - -0.3 1,538,631 - -0.1 1,538,685 + -0.1 1,538,690 + -1.2 1,538,698 - -2.1 1,538,705 + -2.3 1,538,713 - -1.6 1,538,901 - MPMX20_01469 0.12 -2.9 1,538,953 + MPMX20_01469 0.15 -1.1 1,538,971 - MPMX20_01469 0.16 -2.5 1,538,978 - MPMX20_01469 0.16 -2.1 1,538,978 - MPMX20_01469 0.16 -2.4 1,538,995 - MPMX20_01469 0.17 +0.3 1,539,078 + MPMX20_01469 0.21 -1.3 1,539,095 + MPMX20_01469 0.22 -2.3 1,539,151 + MPMX20_01469 0.25 -1.7 1,539,176 + MPMX20_01469 0.26 -2.5 1,539,368 - MPMX20_01469 0.37 -0.4 1,539,667 - MPMX20_01469 0.53 -0.3 1,539,672 - MPMX20_01469 0.53 -2.2 1,539,752 - MPMX20_01469 0.57 -2.2 1,539,794 + MPMX20_01469 0.60 -0.1 1,539,794 + MPMX20_01469 0.60 -2.3 1,539,802 - MPMX20_01469 0.60 -0.6 1,539,802 - MPMX20_01469 0.60 -2.5 1,539,802 - MPMX20_01469 0.60 -1.7 1,539,818 + MPMX20_01469 0.61 -0.1 1,539,850 + MPMX20_01469 0.62 -1.4 1,539,907 + MPMX20_01469 0.66 -2.0 1,539,917 + MPMX20_01469 0.66 -0.6 1,539,925 - MPMX20_01469 0.67 -2.7 1,539,942 + MPMX20_01469 0.67 -2.4 1,540,037 + MPMX20_01469 0.72 -1.5 1,540,048 + MPMX20_01469 0.73 -3.2 1,540,149 - MPMX20_01469 0.78 +0.4 1,540,165 + MPMX20_01469 0.79 -0.4 1,540,174 - MPMX20_01469 0.80 -0.4 1,540,273 - MPMX20_01469 0.85 -2.5 1,540,277 + MPMX20_01469 0.85 -0.5 1,540,318 - MPMX20_01469 0.88 -3.2 1,540,350 + MPMX20_01469 0.89 -0.8 1,540,350 + MPMX20_01469 0.89 -0.9 1,540,391 + -0.9 1,540,490 + -1.2 1,540,525 - -1.8 1,540,607 - +0.4 1,540,724 + +0.2 1,540,750 + MPMX20_01470 0.11 +0.5 1,540,758 - MPMX20_01470 0.12 -1.1 1,540,764 + MPMX20_01470 0.12 +1.5 1,540,806 + MPMX20_01470 0.15 -0.9 1,540,806 + MPMX20_01470 0.15 +0.0 1,540,813 - MPMX20_01470 0.15 +0.5 1,540,832 + MPMX20_01470 0.17 +0.3 1,540,832 + MPMX20_01470 0.17 -0.4 1,540,833 + MPMX20_01470 0.17 -0.1 1,540,840 + MPMX20_01470 0.17 -0.2 1,540,840 - MPMX20_01470 0.17 -0.3 1,540,841 - MPMX20_01470 0.17 -0.3 1,540,841 - MPMX20_01470 0.17 +0.2 1,540,847 + MPMX20_01470 0.18 +0.0 1,540,848 - MPMX20_01470 0.18 +0.0 1,540,848 - MPMX20_01470 0.18 -1.1 1,540,855 - MPMX20_01470 0.18 +1.4 1,540,855 - MPMX20_01470 0.18 -2.6 1,540,855 - MPMX20_01470 0.18 -0.0 1,540,855 - MPMX20_01470 0.18 +0.6 1,540,904 + MPMX20_01470 0.21 -1.1 1,540,906 - MPMX20_01470 0.22 -2.4 1,540,912 - MPMX20_01470 0.22 -0.8 1,540,983 - MPMX20_01470 0.27 +1.4 1,541,125 + MPMX20_01470 0.36 +0.1 1,541,157 - MPMX20_01470 0.38 -0.9 1,541,157 - MPMX20_01470 0.38 -0.2 1,541,183 - MPMX20_01470 0.40 +0.1 1,541,191 - MPMX20_01470 0.40 -1.6 1,541,224 + MPMX20_01470 0.42 -0.1 1,541,232 - MPMX20_01470 0.43 -1.7 1,541,308 + MPMX20_01470 0.48 +0.3 1,541,344 + MPMX20_01470 0.50 +1.3 1,541,391 - MPMX20_01470 0.53 -0.6 1,541,549 + MPMX20_01470 0.63 +0.3
Or see this region's nucleotide sequence