Experiment: P1vir
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECOLIN_RS06475 and ECOLIN_RS31330 are separated by 17 nucleotides ECOLIN_RS31330 and ECOLIN_RS32500 are separated by 257 nucleotides ECOLIN_RS32500 and ECOLIN_RS30535 are separated by 9 nucleotides ECOLIN_RS30535 and ECOLIN_RS28185 are separated by 1 nucleotides ECOLIN_RS28185 and ECOLIN_RS32760 are separated by 0 nucleotides ECOLIN_RS32760 and ECOLIN_RS06480 overlap by 18 nucleotides ECOLIN_RS06480 and ECOLIN_RS06485 overlap by 17 nucleotides
ECOLIN_RS06475: ECOLIN_RS06475 - spermidine/putrescine ABC transporter permease PotC, at 1,303,592 to 1,304,386
_RS06475
ECOLIN_RS31330: ECOLIN_RS31330 - lysozyme, at 1,304,404 to 1,304,478
_RS31330
ECOLIN_RS32500: ECOLIN_RS32500 - phage portal protein, at 1,304,736 to 1,304,945
_RS32500
ECOLIN_RS30535: ECOLIN_RS30535 - head decoration protein, at 1,304,955 to 1,305,071
_RS30535
ECOLIN_RS28185: ECOLIN_RS28185 - phage tail tape measure protein, at 1,305,073 to 1,305,339
_RS28185
ECOLIN_RS32760: ECOLIN_RS32760 - class I SAM-dependent methyltransferase, at 1,305,340 to 1,305,675
_RS32760
ECOLIN_RS06480: ECOLIN_RS06480 - spermidine/putrescine ABC transporter permease PotB, at 1,305,658 to 1,306,518
_RS06480
ECOLIN_RS06485: ECOLIN_RS06485 - spermidine/putrescine ABC transporter ATP-binding protein PotA, at 1,306,502 to 1,307,638
_RS06485
Position (kb) 1305
1306 Strain fitness (log2 ratio) -1
0
1 at 1306.504 kb on - strand
Per-strain Table
Or see this region's nucleotide sequence