Experiment: D-Glc (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04126 and MPMX20_04127 are separated by 9 nucleotides MPMX20_04127 and MPMX20_04128 are separated by 105 nucleotides MPMX20_04128 and MPMX20_04129 overlap by 4 nucleotides
MPMX20_04126: MPMX20_04126 - Glutamate synthase [NADPH] large chain, at 4,322,524 to 4,326,984
_04126
MPMX20_04127: MPMX20_04127 - Glutamate synthase [NADPH] small chain, at 4,326,994 to 4,328,412
_04127
MPMX20_04128: MPMX20_04128 - hypothetical protein, at 4,328,518 to 4,329,078
_04128
MPMX20_04129: MPMX20_04129 - Outer membrane usher protein YraJ, at 4,329,075 to 4,331,495
_04129
Position (kb)
4326
4327
4328
4329 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2
3 at 4326.017 kb on + strand, within MPMX20_04126 at 4326.025 kb on - strand, within MPMX20_04126 at 4326.035 kb on - strand, within MPMX20_04126 at 4326.058 kb on - strand, within MPMX20_04126 at 4326.073 kb on - strand, within MPMX20_04126 at 4326.115 kb on + strand, within MPMX20_04126 at 4326.120 kb on + strand, within MPMX20_04126 at 4326.224 kb on + strand, within MPMX20_04126 at 4326.224 kb on + strand, within MPMX20_04126 at 4326.278 kb on - strand, within MPMX20_04126 at 4326.295 kb on + strand, within MPMX20_04126 at 4326.354 kb on - strand, within MPMX20_04126 at 4326.354 kb on - strand, within MPMX20_04126 at 4326.359 kb on - strand, within MPMX20_04126 at 4326.377 kb on + strand, within MPMX20_04126 at 4326.408 kb on + strand, within MPMX20_04126 at 4326.431 kb on - strand, within MPMX20_04126 at 4326.464 kb on + strand, within MPMX20_04126 at 4326.472 kb on - strand, within MPMX20_04126 at 4326.508 kb on + strand, within MPMX20_04126 at 4326.638 kb on + strand at 4326.693 kb on - strand at 4326.717 kb on - strand at 4326.746 kb on + strand at 4326.771 kb on - strand at 4326.794 kb on + strand at 4326.851 kb on + strand at 4326.900 kb on + strand at 4326.908 kb on - strand at 4326.908 kb on - strand at 4326.950 kb on - strand at 4326.956 kb on + strand at 4326.956 kb on + strand at 4326.964 kb on - strand at 4327.005 kb on + strand at 4327.031 kb on - strand at 4327.113 kb on - strand at 4327.113 kb on - strand at 4327.145 kb on - strand, within MPMX20_04127 at 4327.149 kb on + strand, within MPMX20_04127 at 4327.149 kb on + strand, within MPMX20_04127 at 4327.149 kb on + strand, within MPMX20_04127 at 4327.150 kb on - strand, within MPMX20_04127 at 4327.157 kb on - strand, within MPMX20_04127 at 4327.181 kb on + strand, within MPMX20_04127 at 4327.204 kb on - strand, within MPMX20_04127 at 4327.204 kb on - strand, within MPMX20_04127 at 4327.204 kb on - strand, within MPMX20_04127 at 4327.232 kb on + strand, within MPMX20_04127 at 4327.246 kb on + strand, within MPMX20_04127 at 4327.246 kb on + strand, within MPMX20_04127 at 4327.288 kb on + strand, within MPMX20_04127 at 4327.296 kb on - strand, within MPMX20_04127 at 4327.310 kb on - strand, within MPMX20_04127 at 4327.313 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.465 kb on + strand, within MPMX20_04127 at 4327.473 kb on - strand, within MPMX20_04127 at 4327.473 kb on - strand, within MPMX20_04127 at 4327.473 kb on - strand, within MPMX20_04127 at 4327.483 kb on + strand, within MPMX20_04127 at 4327.483 kb on - strand, within MPMX20_04127 at 4327.564 kb on + strand, within MPMX20_04127 at 4327.592 kb on - strand, within MPMX20_04127 at 4327.683 kb on + strand, within MPMX20_04127 at 4327.720 kb on - strand, within MPMX20_04127 at 4327.759 kb on + strand, within MPMX20_04127 at 4327.832 kb on + strand, within MPMX20_04127 at 4327.888 kb on + strand, within MPMX20_04127 at 4327.888 kb on + strand, within MPMX20_04127 at 4327.901 kb on - strand, within MPMX20_04127 at 4328.118 kb on - strand, within MPMX20_04127 at 4328.155 kb on - strand, within MPMX20_04127 at 4328.155 kb on - strand, within MPMX20_04127 at 4328.215 kb on - strand, within MPMX20_04127 at 4328.226 kb on + strand, within MPMX20_04127 at 4328.229 kb on - strand, within MPMX20_04127 at 4328.231 kb on + strand, within MPMX20_04127 at 4328.231 kb on + strand, within MPMX20_04127 at 4328.231 kb on + strand, within MPMX20_04127 at 4328.231 kb on + strand, within MPMX20_04127 at 4328.236 kb on + strand, within MPMX20_04127 at 4328.239 kb on - strand, within MPMX20_04127 at 4328.239 kb on - strand, within MPMX20_04127 at 4328.239 kb on - strand, within MPMX20_04127 at 4328.239 kb on - strand, within MPMX20_04127 at 4328.321 kb on + strand at 4328.336 kb on + strand at 4328.336 kb on + strand at 4328.336 kb on + strand at 4328.336 kb on + strand at 4328.336 kb on + strand at 4328.344 kb on - strand at 4328.344 kb on - strand at 4328.346 kb on + strand at 4328.362 kb on + strand at 4328.389 kb on + strand at 4328.389 kb on + strand at 4328.397 kb on - strand at 4328.397 kb on - strand at 4328.397 kb on - strand at 4328.397 kb on - strand at 4328.399 kb on + strand at 4328.399 kb on + strand at 4328.399 kb on + strand at 4328.399 kb on + strand at 4328.464 kb on - strand at 4328.492 kb on + strand at 4328.523 kb on - strand at 4328.598 kb on + strand, within MPMX20_04128 at 4328.611 kb on - strand, within MPMX20_04128 at 4328.649 kb on + strand, within MPMX20_04128 at 4328.695 kb on - strand, within MPMX20_04128 at 4328.695 kb on - strand, within MPMX20_04128 at 4328.697 kb on + strand, within MPMX20_04128 at 4328.761 kb on - strand, within MPMX20_04128 at 4328.761 kb on - strand, within MPMX20_04128 at 4328.801 kb on + strand, within MPMX20_04128 at 4328.809 kb on - strand, within MPMX20_04128 at 4328.843 kb on + strand, within MPMX20_04128 at 4328.843 kb on - strand, within MPMX20_04128 at 4328.851 kb on - strand, within MPMX20_04128 at 4328.851 kb on - strand, within MPMX20_04128 at 4328.851 kb on - strand, within MPMX20_04128 at 4328.851 kb on - strand, within MPMX20_04128 at 4328.926 kb on + strand, within MPMX20_04128 at 4329.015 kb on + strand, within MPMX20_04128 at 4329.024 kb on - strand at 4329.024 kb on - strand at 4329.049 kb on + strand at 4329.103 kb on - strand at 4329.135 kb on + strand at 4329.145 kb on + strand at 4329.145 kb on + strand at 4329.145 kb on + strand at 4329.153 kb on - strand at 4329.153 kb on - strand at 4329.187 kb on + strand at 4329.224 kb on - strand at 4329.246 kb on + strand at 4329.246 kb on + strand at 4329.255 kb on - strand at 4329.277 kb on + strand at 4329.305 kb on + strand at 4329.305 kb on + strand at 4329.305 kb on + strand at 4329.305 kb on + strand at 4329.305 kb on + strand at 4329.305 kb on + strand at 4329.313 kb on - strand at 4329.313 kb on - strand at 4329.313 kb on - strand at 4329.313 kb on - strand at 4329.313 kb on - strand at 4329.313 kb on - strand at 4329.313 kb on - strand at 4329.313 kb on - strand at 4329.333 kb on + strand, within MPMX20_04129 at 4329.360 kb on + strand, within MPMX20_04129 at 4329.366 kb on + strand, within MPMX20_04129 at 4329.374 kb on - strand, within MPMX20_04129 at 4329.402 kb on - strand, within MPMX20_04129 at 4329.404 kb on + strand, within MPMX20_04129 at 4329.404 kb on + strand, within MPMX20_04129 at 4329.412 kb on - strand, within MPMX20_04129
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glc (C) remove 4,326,017 + MPMX20_04126 0.78 -2.6 4,326,025 - MPMX20_04126 0.78 -3.8 4,326,035 - MPMX20_04126 0.79 -2.8 4,326,058 - MPMX20_04126 0.79 -4.3 4,326,073 - MPMX20_04126 0.80 -4.5 4,326,115 + MPMX20_04126 0.80 -4.6 4,326,120 + MPMX20_04126 0.81 -4.9 4,326,224 + MPMX20_04126 0.83 -1.8 4,326,224 + MPMX20_04126 0.83 -2.4 4,326,278 - MPMX20_04126 0.84 -1.1 4,326,295 + MPMX20_04126 0.85 -3.3 4,326,354 - MPMX20_04126 0.86 -3.7 4,326,354 - MPMX20_04126 0.86 -5.2 4,326,359 - MPMX20_04126 0.86 -3.9 4,326,377 + MPMX20_04126 0.86 -2.6 4,326,408 + MPMX20_04126 0.87 -4.7 4,326,431 - MPMX20_04126 0.88 -4.0 4,326,464 + MPMX20_04126 0.88 -4.9 4,326,472 - MPMX20_04126 0.89 -0.8 4,326,508 + MPMX20_04126 0.89 -3.5 4,326,638 + -4.1 4,326,693 - -3.7 4,326,717 - -2.9 4,326,746 + -3.6 4,326,771 - +0.0 4,326,794 + -3.1 4,326,851 + -3.9 4,326,900 + -1.5 4,326,908 - -0.3 4,326,908 - -1.8 4,326,950 - -4.2 4,326,956 + -0.6 4,326,956 + -0.0 4,326,964 - -2.3 4,327,005 + -0.3 4,327,031 - -4.4 4,327,113 - -2.0 4,327,113 - -1.9 4,327,145 - MPMX20_04127 0.11 -2.3 4,327,149 + MPMX20_04127 0.11 -4.2 4,327,149 + MPMX20_04127 0.11 -4.5 4,327,149 + MPMX20_04127 0.11 -3.7 4,327,150 - MPMX20_04127 0.11 -0.3 4,327,157 - MPMX20_04127 0.11 -2.6 4,327,181 + MPMX20_04127 0.13 -3.6 4,327,204 - MPMX20_04127 0.15 -4.5 4,327,204 - MPMX20_04127 0.15 -4.9 4,327,204 - MPMX20_04127 0.15 -4.4 4,327,232 + MPMX20_04127 0.17 -1.6 4,327,246 + MPMX20_04127 0.18 -0.8 4,327,246 + MPMX20_04127 0.18 -2.9 4,327,288 + MPMX20_04127 0.21 -4.0 4,327,296 - MPMX20_04127 0.21 -1.6 4,327,310 - MPMX20_04127 0.22 -4.5 4,327,313 + MPMX20_04127 0.22 -2.6 4,327,465 + MPMX20_04127 0.33 -5.0 4,327,465 + MPMX20_04127 0.33 -4.4 4,327,465 + MPMX20_04127 0.33 -2.1 4,327,465 + MPMX20_04127 0.33 -4.3 4,327,465 + MPMX20_04127 0.33 -4.8 4,327,465 + MPMX20_04127 0.33 -2.5 4,327,465 + MPMX20_04127 0.33 -3.9 4,327,465 + MPMX20_04127 0.33 -4.8 4,327,465 + MPMX20_04127 0.33 -3.3 4,327,473 - MPMX20_04127 0.34 -3.8 4,327,473 - MPMX20_04127 0.34 -0.6 4,327,473 - MPMX20_04127 0.34 -2.4 4,327,483 + MPMX20_04127 0.34 -4.7 4,327,483 - MPMX20_04127 0.34 -2.7 4,327,564 + MPMX20_04127 0.40 -3.1 4,327,592 - MPMX20_04127 0.42 -2.3 4,327,683 + MPMX20_04127 0.49 -0.3 4,327,720 - MPMX20_04127 0.51 -0.6 4,327,759 + MPMX20_04127 0.54 -1.4 4,327,832 + MPMX20_04127 0.59 -4.3 4,327,888 + MPMX20_04127 0.63 -4.0 4,327,888 + MPMX20_04127 0.63 -4.2 4,327,901 - MPMX20_04127 0.64 -1.6 4,328,118 - MPMX20_04127 0.79 -3.3 4,328,155 - MPMX20_04127 0.82 -3.7 4,328,155 - MPMX20_04127 0.82 -3.2 4,328,215 - MPMX20_04127 0.86 -4.2 4,328,226 + MPMX20_04127 0.87 -5.3 4,328,229 - MPMX20_04127 0.87 -0.6 4,328,231 + MPMX20_04127 0.87 -0.6 4,328,231 + MPMX20_04127 0.87 -3.9 4,328,231 + MPMX20_04127 0.87 -3.4 4,328,231 + MPMX20_04127 0.87 -4.3 4,328,236 + MPMX20_04127 0.88 -4.0 4,328,239 - MPMX20_04127 0.88 -3.5 4,328,239 - MPMX20_04127 0.88 -4.0 4,328,239 - MPMX20_04127 0.88 -3.6 4,328,239 - MPMX20_04127 0.88 -1.8 4,328,321 + -2.5 4,328,336 + -4.7 4,328,336 + -3.1 4,328,336 + -1.7 4,328,336 + -3.3 4,328,336 + -5.8 4,328,344 - -3.6 4,328,344 - -4.2 4,328,346 + -1.0 4,328,362 + -3.7 4,328,389 + -4.7 4,328,389 + -3.8 4,328,397 - -1.9 4,328,397 - -3.1 4,328,397 - -2.6 4,328,397 - -3.9 4,328,399 + +3.6 4,328,399 + +0.1 4,328,399 + -1.2 4,328,399 + -1.0 4,328,464 - +0.2 4,328,492 + +1.1 4,328,523 - +0.5 4,328,598 + MPMX20_04128 0.14 +0.3 4,328,611 - MPMX20_04128 0.17 +0.3 4,328,649 + MPMX20_04128 0.23 +0.9 4,328,695 - MPMX20_04128 0.32 -1.0 4,328,695 - MPMX20_04128 0.32 -0.3 4,328,697 + MPMX20_04128 0.32 -0.5 4,328,761 - MPMX20_04128 0.43 -0.5 4,328,761 - MPMX20_04128 0.43 -1.2 4,328,801 + MPMX20_04128 0.50 -3.1 4,328,809 - MPMX20_04128 0.52 -0.1 4,328,843 + MPMX20_04128 0.58 -1.3 4,328,843 - MPMX20_04128 0.58 -2.5 4,328,851 - MPMX20_04128 0.59 -0.7 4,328,851 - MPMX20_04128 0.59 +1.0 4,328,851 - MPMX20_04128 0.59 -0.0 4,328,851 - MPMX20_04128 0.59 -2.7 4,328,926 + MPMX20_04128 0.73 -0.0 4,329,015 + MPMX20_04128 0.89 -0.0 4,329,024 - +1.4 4,329,024 - +1.0 4,329,049 + -0.1 4,329,103 - -1.0 4,329,135 + +0.0 4,329,145 + +0.3 4,329,145 + +0.0 4,329,145 + -0.5 4,329,153 - +0.7 4,329,153 - +1.1 4,329,187 + -0.5 4,329,224 - +0.6 4,329,246 + -0.8 4,329,246 + +0.1 4,329,255 - +0.6 4,329,277 + -0.8 4,329,305 + -0.4 4,329,305 + +0.7 4,329,305 + +0.9 4,329,305 + +0.8 4,329,305 + -0.8 4,329,305 + -0.1 4,329,313 - +2.5 4,329,313 - +0.5 4,329,313 - +0.1 4,329,313 - +0.2 4,329,313 - -0.6 4,329,313 - +0.5 4,329,313 - -0.8 4,329,313 - -0.3 4,329,333 + MPMX20_04129 0.11 -1.1 4,329,360 + MPMX20_04129 0.12 +1.2 4,329,366 + MPMX20_04129 0.12 -0.8 4,329,374 - MPMX20_04129 0.12 +0.3 4,329,402 - MPMX20_04129 0.14 +0.0 4,329,404 + MPMX20_04129 0.14 +0.4 4,329,404 + MPMX20_04129 0.14 -0.1 4,329,412 - MPMX20_04129 0.14 +0.1
Or see this region's nucleotide sequence