Strain Fitness in Escherichia coli Nissle 1917 around ECOLIN_RS08935

Experiment: K20

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

No fitness data for strains within 1,760,572 to 1,762,901
download SVG
500 ntECOLIN_RS08925 and ECOLIN_RS08930 are separated by 99 nucleotidesECOLIN_RS08930 and ECOLIN_RS08935 are separated by 38 nucleotidesECOLIN_RS08935 and ECOLIN_RS08940 overlap by 14 nucleotidesECOLIN_RS08940 and ECOLIN_RS08945 are separated by 411 nucleotides ECOLIN_RS08925: ECOLIN_RS08925 - hypothetical protein, at 1,760,529 to 1,760,612 _RS08925 ECOLIN_RS08930: ECOLIN_RS08930 - serine protease, at 1,760,712 to 1,761,533 _RS08930 ECOLIN_RS08935: ECOLIN_RS08935 - multidrug/spermidine efflux SMR transporter subunit MdtI, at 1,761,572 to 1,761,901 _RS08935 ECOLIN_RS08940: ECOLIN_RS08940 - multidrug/spermidine efflux SMR transporter subunit MdtJ, at 1,761,888 to 1,762,253 _RS08940 ECOLIN_RS08945: ECOLIN_RS08945 - AI-2 transporter TqsA, at 1,762,665 to 1,763,699 _RS08945