Strain Fitness in Parabacteroides merdae CL09T00C40 around HMPREF1078_RS04405

Experiment: D-Maltose 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Maltose 10 mg/mL (C)
112,228	+				+1.7
112,235	+				-0.5
112,235	+				-0.8
112,235	+				-0.4
112,237	+				-1.3
112,237	+				-3.3
112,237	+				-0.0
112,237	+				-0.5
112,237	+				-0.9
112,350	+		HMPREF1078_RS04405	0.15	-2.3
112,423	+		HMPREF1078_RS04405	0.23	-2.2
112,423	+		HMPREF1078_RS04405	0.23	-0.9
112,475	+		HMPREF1078_RS04405	0.28	-0.7
112,475	+		HMPREF1078_RS04405	0.28	-1.5
112,651	+		HMPREF1078_RS04405	0.46	-1.0
112,719	+		HMPREF1078_RS04405	0.53	-0.7
112,761	+		HMPREF1078_RS04405	0.57	-0.5
112,761	+		HMPREF1078_RS04405	0.57	-3.1
112,803	+		HMPREF1078_RS04405	0.61	-2.7
112,858	+		HMPREF1078_RS04405	0.67	-1.3
112,906	+		HMPREF1078_RS04405	0.72	-2.0
112,954	+		HMPREF1078_RS04405	0.77	+1.4
112,997	+		HMPREF1078_RS04405	0.81	-0.7
113,086	+				-1.6
113,104	+				-1.5
113,107	+				-1.7
113,110	+				-1.4
113,110	+				-1.2
113,142	+				-0.9
113,142	+				+1.4
113,142	+				-0.1
113,561	+				-0.4
113,562	-				+2.8
113,562	-				-0.2
113,596	+				-2.1
113,611	+				+1.9
113,630	+				-3.3
113,728	+		HMPREF1078_RS04415	0.21	-1.3
113,728	+		HMPREF1078_RS04415	0.21	-0.9
113,728	+		HMPREF1078_RS04415	0.21	-0.0
113,729	-		HMPREF1078_RS04415	0.21	-1.3
113,729	-		HMPREF1078_RS04415	0.21	-2.6
113,729	-		HMPREF1078_RS04415	0.21	+0.7
113,729	-		HMPREF1078_RS04415	0.21	+1.3
113,729	-		HMPREF1078_RS04415	0.21	-2.3
113,729	-		HMPREF1078_RS04415	0.21	-1.4
113,729	-		HMPREF1078_RS04415	0.21	-0.9
113,765	+		HMPREF1078_RS04415	0.31	-2.2
113,765	+		HMPREF1078_RS04415	0.31	-2.0
113,765	+		HMPREF1078_RS04415	0.31	-1.7
113,765	+		HMPREF1078_RS04415	0.31	-1.7
113,810	+		HMPREF1078_RS04415	0.42	-0.5
113,829	+		HMPREF1078_RS04415	0.47	-1.5
113,829	+		HMPREF1078_RS04415	0.47	-2.7
113,829	+		HMPREF1078_RS04415	0.47	-2.1
113,830	-		HMPREF1078_RS04415	0.47	+0.6
113,830	-		HMPREF1078_RS04415	0.47	-1.2
113,830	-		HMPREF1078_RS04415	0.47	-0.2
113,834	+		HMPREF1078_RS04415	0.48	-0.6
113,846	+		HMPREF1078_RS04415	0.51	-2.7
113,861	-		HMPREF1078_RS04415	0.55	-2.1
113,883	+		HMPREF1078_RS04415	0.60	-0.7
113,884	-		HMPREF1078_RS04415	0.61	-1.2
113,960	+		HMPREF1078_RS04415	0.80	-0.3
114,038	-				-0.7
114,097	+				-2.8
114,099	+				+1.1
114,106	+				-0.0
114,135	+				-0.8