Strain Fitness in Parabacteroides merdae CL09T00C40 around HMPREF1078_RS17075

Experiment: D-Galactose 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Galactose 10 mg/mL (C)
123,403	-				+1.5
124,221	-				-0.9
124,221	-				+0.8
124,223	-				+0.0
124,252	+				+0.3
124,264	+				-1.7
124,264	+				+0.4
124,357	-				-2.4
124,369	-				-0.9
124,376	+				-1.1
124,376	+				-2.1
124,376	+				-1.7
124,377	-				-0.3
124,385	+				-3.2
124,393	+				-2.7
124,393	+				-3.4
124,394	-				-1.7
124,394	-				-3.2
124,394	-				-1.6
124,469	+		HMPREF1078_RS17075	0.14	-3.4
124,470	-		HMPREF1078_RS17075	0.14	-3.8
124,478	+		HMPREF1078_RS17075	0.15	-3.6
124,479	-		HMPREF1078_RS17075	0.16	-0.4
124,556	-		HMPREF1078_RS17075	0.26	-0.7
124,557	+		HMPREF1078_RS17075	0.26	-3.3
124,589	+		HMPREF1078_RS17075	0.30	-2.1
124,596	+		HMPREF1078_RS17075	0.31	-2.3
124,597	-		HMPREF1078_RS17075	0.31	-2.2
124,597	-		HMPREF1078_RS17075	0.31	-2.8
124,806	+		HMPREF1078_RS17075	0.59	-2.5
124,806	+		HMPREF1078_RS17075	0.59	-1.9
124,815	+		HMPREF1078_RS17075	0.61	-3.4
124,816	-		HMPREF1078_RS17075	0.61	-2.9
124,816	-		HMPREF1078_RS17075	0.61	-2.6
124,869	+		HMPREF1078_RS17075	0.68	-1.8
124,869	+		HMPREF1078_RS17075	0.68	-2.1
124,870	-		HMPREF1078_RS17075	0.68	-3.0
124,906	+		HMPREF1078_RS17075	0.73	-0.8
124,907	-		HMPREF1078_RS17075	0.73	-1.3
124,930	+		HMPREF1078_RS17075	0.76	-3.0
124,930	+		HMPREF1078_RS17075	0.76	-1.7
124,941	+		HMPREF1078_RS17075	0.77	-1.1
124,941	+		HMPREF1078_RS17075	0.77	-0.7
124,954	+		HMPREF1078_RS17075	0.79	-2.8
124,955	-		HMPREF1078_RS17075	0.79	-1.3
124,966	-		HMPREF1078_RS17075	0.81	-3.5
124,995	+		HMPREF1078_RS17075	0.85	-0.9
124,996	-		HMPREF1078_RS17075	0.85	-2.4
124,996	-		HMPREF1078_RS17075	0.85	-2.1
125,088	-				-2.3
125,097	-				+0.5
125,107	+				+0.3
125,130	+				-1.3
125,130	+				-1.9
125,130	+				-2.8
125,130	+				-3.7
125,291	-		HMPREF1078_RS17080	0.23	-0.9
125,320	-		HMPREF1078_RS17080	0.26	-1.7
125,356	-		HMPREF1078_RS17080	0.31	-1.4
125,424	+		HMPREF1078_RS17080	0.39	-2.7
125,424	+		HMPREF1078_RS17080	0.39	-3.6
125,425	-		HMPREF1078_RS17080	0.40	-2.6
125,425	-		HMPREF1078_RS17080	0.40	-1.4
125,425	-		HMPREF1078_RS17080	0.40	-0.1
125,443	+		HMPREF1078_RS17080	0.42	-1.8
125,443	+		HMPREF1078_RS17080	0.42	-2.3
125,443	+		HMPREF1078_RS17080	0.42	-4.8
125,443	+		HMPREF1078_RS17080	0.42	-0.8
125,535	+		HMPREF1078_RS17080	0.53	-3.8
125,585	-		HMPREF1078_RS17080	0.60	-2.2
125,637	+		HMPREF1078_RS17080	0.66	-0.6
125,658	+		HMPREF1078_RS17080	0.69	-1.1
125,671	+		HMPREF1078_RS17080	0.71	-2.0
125,685	+		HMPREF1078_RS17080	0.72	-1.3
125,685	+		HMPREF1078_RS17080	0.72	-2.7
125,685	+		HMPREF1078_RS17080	0.72	-1.9
125,686	-		HMPREF1078_RS17080	0.73	-3.0
125,686	-		HMPREF1078_RS17080	0.73	-1.9
125,790	+		HMPREF1078_RS17080	0.86	-2.3
125,791	-		HMPREF1078_RS17080	0.86	-1.1
125,873	+				+1.4
125,908	-				-0.1
125,958	+				+0.4
125,970	+				-0.3
126,015	+				-0.5
126,015	+				+0.5
126,015	+				-0.5
126,016	-				+0.9
126,016	-				+0.2
126,056	+				+0.5
126,057	-				+0.4
126,059	+				-1.9
126,066	+				+1.0
126,066	+				-1.1
126,066	+				+0.4
126,066	+				-0.6
126,066	+				+0.5
126,066	+				+0.0
126,067	-				-0.0
126,067	-				-0.6
126,067	-				+0.4
126,070	+				+0.6
126,070	+				+2.5
126,070	+				+0.8
126,071	-				-0.0
126,071	-				-2.4
126,071	-				+1.3
126,071	-				+0.5
126,072	+				+0.9
126,072	+				+0.6
126,073	-				+1.1
126,073	-				+0.8
126,073	-				+1.6
126,073	-				+0.7
126,076	+				+0.3
126,076	+				-0.3
126,077	-				+0.4
126,077	-				+0.7