Experiment: .-Glucan from yeast 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1078_RS16625 and HMPREF1078_RS16630 are separated by 366 nucleotides HMPREF1078_RS16630 and HMPREF1078_RS16635 are separated by 220 nucleotides
HMPREF1078_RS16625: HMPREF1078_RS16625 - DUF6383 domain-containing protein, at 34,762 to 37,278
_RS16625
HMPREF1078_RS16630: HMPREF1078_RS16630 - mechanosensitive ion channel, at 37,645 to 38,427
_RS16630
HMPREF1078_RS16635: HMPREF1078_RS16635 - tetratricopeptide repeat protein, at 38,648 to 39,475
_RS16635
Position (kb) 37
38
39 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 36.652 kb on - strand, within HMPREF1078_RS16625 at 36.696 kb on + strand, within HMPREF1078_RS16625 at 36.696 kb on + strand, within HMPREF1078_RS16625 at 36.703 kb on - strand, within HMPREF1078_RS16625 at 36.703 kb on - strand, within HMPREF1078_RS16625 at 36.713 kb on + strand, within HMPREF1078_RS16625 at 36.713 kb on + strand, within HMPREF1078_RS16625 at 36.718 kb on - strand, within HMPREF1078_RS16625 at 36.718 kb on - strand, within HMPREF1078_RS16625 at 36.718 kb on - strand, within HMPREF1078_RS16625 at 36.741 kb on + strand, within HMPREF1078_RS16625 at 36.793 kb on - strand, within HMPREF1078_RS16625 at 36.793 kb on - strand, within HMPREF1078_RS16625 at 36.851 kb on - strand, within HMPREF1078_RS16625 at 36.851 kb on - strand, within HMPREF1078_RS16625 at 36.851 kb on - strand, within HMPREF1078_RS16625 at 36.870 kb on + strand, within HMPREF1078_RS16625 at 36.880 kb on + strand, within HMPREF1078_RS16625 at 36.881 kb on - strand, within HMPREF1078_RS16625 at 36.881 kb on - strand, within HMPREF1078_RS16625 at 36.893 kb on - strand, within HMPREF1078_RS16625 at 36.942 kb on + strand, within HMPREF1078_RS16625 at 36.943 kb on - strand, within HMPREF1078_RS16625 at 36.948 kb on + strand, within HMPREF1078_RS16625 at 36.948 kb on + strand, within HMPREF1078_RS16625 at 36.949 kb on - strand, within HMPREF1078_RS16625 at 37.008 kb on - strand, within HMPREF1078_RS16625 at 37.031 kb on - strand at 37.071 kb on + strand at 37.072 kb on - strand at 37.125 kb on + strand at 37.126 kb on - strand at 37.126 kb on - strand at 37.142 kb on + strand at 37.142 kb on + strand at 37.146 kb on + strand at 37.147 kb on - strand at 37.166 kb on + strand at 37.167 kb on - strand at 37.169 kb on + strand at 37.169 kb on + strand at 37.170 kb on - strand at 37.170 kb on - strand at 37.170 kb on - strand at 37.173 kb on + strand at 37.278 kb on + strand at 37.299 kb on + strand at 37.300 kb on - strand at 37.308 kb on - strand at 37.354 kb on - strand at 37.366 kb on - strand at 37.366 kb on - strand at 37.369 kb on + strand at 37.369 kb on + strand at 37.369 kb on + strand at 37.370 kb on - strand at 37.370 kb on - strand at 37.381 kb on + strand at 37.382 kb on - strand at 37.382 kb on - strand at 37.411 kb on + strand at 37.411 kb on + strand at 37.415 kb on - strand at 37.415 kb on - strand at 37.461 kb on + strand at 37.461 kb on + strand at 37.471 kb on + strand at 37.472 kb on - strand at 37.480 kb on + strand at 37.480 kb on + strand at 37.481 kb on - strand at 37.481 kb on - strand at 37.481 kb on - strand at 37.485 kb on + strand at 37.486 kb on - strand at 37.493 kb on + strand at 37.493 kb on + strand at 37.505 kb on + strand at 37.506 kb on - strand at 37.516 kb on + strand at 37.516 kb on + strand at 37.516 kb on + strand at 37.517 kb on - strand at 37.517 kb on - strand at 37.538 kb on - strand at 37.538 kb on - strand at 37.539 kb on + strand at 37.539 kb on + strand at 37.577 kb on + strand at 37.651 kb on - strand at 37.704 kb on + strand at 37.771 kb on + strand, within HMPREF1078_RS16630 at 37.785 kb on + strand, within HMPREF1078_RS16630 at 37.786 kb on - strand, within HMPREF1078_RS16630 at 37.845 kb on + strand, within HMPREF1078_RS16630 at 37.885 kb on + strand, within HMPREF1078_RS16630 at 37.885 kb on + strand, within HMPREF1078_RS16630 at 37.890 kb on + strand, within HMPREF1078_RS16630 at 37.895 kb on + strand, within HMPREF1078_RS16630 at 37.895 kb on + strand, within HMPREF1078_RS16630 at 37.896 kb on - strand, within HMPREF1078_RS16630 at 37.941 kb on + strand, within HMPREF1078_RS16630 at 37.996 kb on - strand, within HMPREF1078_RS16630 at 37.996 kb on - strand, within HMPREF1078_RS16630 at 37.997 kb on + strand, within HMPREF1078_RS16630 at 37.997 kb on + strand, within HMPREF1078_RS16630 at 37.997 kb on + strand, within HMPREF1078_RS16630 at 37.998 kb on - strand, within HMPREF1078_RS16630 at 38.010 kb on + strand, within HMPREF1078_RS16630 at 38.011 kb on - strand, within HMPREF1078_RS16630 at 38.011 kb on - strand, within HMPREF1078_RS16630 at 38.148 kb on + strand, within HMPREF1078_RS16630 at 38.216 kb on - strand, within HMPREF1078_RS16630 at 38.216 kb on - strand, within HMPREF1078_RS16630 at 38.254 kb on - strand, within HMPREF1078_RS16630 at 38.353 kb on - strand at 38.374 kb on - strand at 38.394 kb on + strand at 38.395 kb on - strand at 38.443 kb on - strand at 38.477 kb on - strand at 38.484 kb on + strand at 38.485 kb on - strand at 38.485 kb on - strand at 38.488 kb on + strand at 38.499 kb on - strand at 38.513 kb on + strand at 38.514 kb on - strand at 38.517 kb on + strand at 38.518 kb on - strand at 38.521 kb on + strand at 38.544 kb on - strand at 38.547 kb on - strand at 38.564 kb on + strand at 38.599 kb on + strand at 38.599 kb on + strand at 38.599 kb on + strand at 38.603 kb on - strand at 38.634 kb on - strand at 38.635 kb on + strand at 38.636 kb on - strand at 38.665 kb on + strand at 38.666 kb on - strand at 38.669 kb on - strand at 38.669 kb on - strand at 38.686 kb on + strand at 38.688 kb on + strand at 38.711 kb on + strand at 38.712 kb on - strand at 38.712 kb on - strand at 38.712 kb on - strand at 38.721 kb on + strand at 38.721 kb on + strand at 38.749 kb on + strand, within HMPREF1078_RS16635 at 38.822 kb on + strand, within HMPREF1078_RS16635 at 38.822 kb on + strand, within HMPREF1078_RS16635 at 38.823 kb on - strand, within HMPREF1078_RS16635 at 38.850 kb on + strand, within HMPREF1078_RS16635 at 38.891 kb on + strand, within HMPREF1078_RS16635 at 38.914 kb on + strand, within HMPREF1078_RS16635 at 38.914 kb on + strand, within HMPREF1078_RS16635 at 38.915 kb on - strand, within HMPREF1078_RS16635 at 38.957 kb on - strand, within HMPREF1078_RS16635 at 38.957 kb on - strand, within HMPREF1078_RS16635 at 38.994 kb on - strand, within HMPREF1078_RS16635 at 38.994 kb on - strand, within HMPREF1078_RS16635 at 39.007 kb on - strand, within HMPREF1078_RS16635 at 39.038 kb on + strand, within HMPREF1078_RS16635 at 39.059 kb on - strand, within HMPREF1078_RS16635 at 39.060 kb on + strand, within HMPREF1078_RS16635 at 39.060 kb on + strand, within HMPREF1078_RS16635 at 39.060 kb on + strand, within HMPREF1078_RS16635 at 39.060 kb on + strand, within HMPREF1078_RS16635 at 39.061 kb on - strand, within HMPREF1078_RS16635 at 39.061 kb on - strand, within HMPREF1078_RS16635 at 39.061 kb on - strand, within HMPREF1078_RS16635 at 39.075 kb on - strand, within HMPREF1078_RS16635 at 39.176 kb on + strand, within HMPREF1078_RS16635 at 39.265 kb on + strand, within HMPREF1078_RS16635 at 39.298 kb on + strand, within HMPREF1078_RS16635 at 39.298 kb on + strand, within HMPREF1078_RS16635 at 39.374 kb on + strand, within HMPREF1078_RS16635 at 39.374 kb on + strand, within HMPREF1078_RS16635 at 39.375 kb on - strand, within HMPREF1078_RS16635 at 39.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction .-Glucan from yeast 2.5 mg/mL (C) remove 36,652 - HMPREF1078_RS16625 0.75 -1.0 36,696 + HMPREF1078_RS16625 0.77 +1.7 36,696 + HMPREF1078_RS16625 0.77 -2.2 36,703 - HMPREF1078_RS16625 0.77 +0.8 36,703 - HMPREF1078_RS16625 0.77 +0.8 36,713 + HMPREF1078_RS16625 0.78 -2.6 36,713 + HMPREF1078_RS16625 0.78 -2.2 36,718 - HMPREF1078_RS16625 0.78 -0.6 36,718 - HMPREF1078_RS16625 0.78 +0.1 36,718 - HMPREF1078_RS16625 0.78 +1.7 36,741 + HMPREF1078_RS16625 0.79 +0.8 36,793 - HMPREF1078_RS16625 0.81 +0.5 36,793 - HMPREF1078_RS16625 0.81 +2.5 36,851 - HMPREF1078_RS16625 0.83 +0.9 36,851 - HMPREF1078_RS16625 0.83 +0.6 36,851 - HMPREF1078_RS16625 0.83 -2.7 36,870 + HMPREF1078_RS16625 0.84 +0.0 36,880 + HMPREF1078_RS16625 0.84 +0.8 36,881 - HMPREF1078_RS16625 0.84 +0.6 36,881 - HMPREF1078_RS16625 0.84 -1.7 36,893 - HMPREF1078_RS16625 0.85 -1.9 36,942 + HMPREF1078_RS16625 0.87 +2.2 36,943 - HMPREF1078_RS16625 0.87 -1.3 36,948 + HMPREF1078_RS16625 0.87 +0.9 36,948 + HMPREF1078_RS16625 0.87 -0.5 36,949 - HMPREF1078_RS16625 0.87 +0.9 37,008 - HMPREF1078_RS16625 0.89 +0.3 37,031 - -2.1 37,071 + +1.0 37,072 - +1.4 37,125 + -1.0 37,126 - +1.1 37,126 - -2.6 37,142 + -0.0 37,142 + +0.2 37,146 + +0.2 37,147 - -0.0 37,166 + +0.1 37,167 - +1.4 37,169 + -0.2 37,169 + -0.6 37,170 - +0.2 37,170 - -2.6 37,170 - +0.0 37,173 + +0.1 37,278 + -2.2 37,299 + -0.4 37,300 - +1.1 37,308 - -0.2 37,354 - +1.4 37,366 - +0.9 37,366 - -2.2 37,369 + -0.9 37,369 + -0.9 37,369 + -1.3 37,370 - +0.0 37,370 - +2.2 37,381 + +1.8 37,382 - -2.4 37,382 - +0.0 37,411 + -3.4 37,411 + +1.1 37,415 - +1.0 37,415 - +0.6 37,461 + -0.3 37,461 + -1.4 37,471 + -0.1 37,472 - -1.6 37,480 + -1.4 37,480 + +0.5 37,481 - -0.1 37,481 - +1.7 37,481 - +1.9 37,485 + -1.0 37,486 - +1.6 37,493 + -0.2 37,493 + +0.6 37,505 + -0.0 37,506 - -0.8 37,516 + +0.2 37,516 + -0.3 37,516 + +0.5 37,517 - +0.2 37,517 - -0.5 37,538 - -1.6 37,538 - -0.2 37,539 + +0.3 37,539 + +0.2 37,577 + -2.0 37,651 - -0.7 37,704 + -0.0 37,771 + HMPREF1078_RS16630 0.16 -1.5 37,785 + HMPREF1078_RS16630 0.18 +2.5 37,786 - HMPREF1078_RS16630 0.18 -2.8 37,845 + HMPREF1078_RS16630 0.26 -2.2 37,885 + HMPREF1078_RS16630 0.31 -0.6 37,885 + HMPREF1078_RS16630 0.31 +1.1 37,890 + HMPREF1078_RS16630 0.31 -0.1 37,895 + HMPREF1078_RS16630 0.32 +0.4 37,895 + HMPREF1078_RS16630 0.32 +1.2 37,896 - HMPREF1078_RS16630 0.32 -3.5 37,941 + HMPREF1078_RS16630 0.38 +0.8 37,996 - HMPREF1078_RS16630 0.45 -0.2 37,996 - HMPREF1078_RS16630 0.45 +0.9 37,997 + HMPREF1078_RS16630 0.45 -1.3 37,997 + HMPREF1078_RS16630 0.45 +0.8 37,997 + HMPREF1078_RS16630 0.45 +1.2 37,998 - HMPREF1078_RS16630 0.45 +0.7 38,010 + HMPREF1078_RS16630 0.47 +0.5 38,011 - HMPREF1078_RS16630 0.47 +0.7 38,011 - HMPREF1078_RS16630 0.47 -2.2 38,148 + HMPREF1078_RS16630 0.64 -2.8 38,216 - HMPREF1078_RS16630 0.73 -1.0 38,216 - HMPREF1078_RS16630 0.73 +1.3 38,254 - HMPREF1078_RS16630 0.78 +1.4 38,353 - +0.0 38,374 - +1.7 38,394 + +0.3 38,395 - -1.0 38,443 - -0.3 38,477 - +0.4 38,484 + -1.5 38,485 - +0.3 38,485 - -0.9 38,488 + -0.8 38,499 - -0.3 38,513 + -0.7 38,514 - +0.2 38,517 + +0.2 38,518 - +1.6 38,521 + -1.7 38,544 - +2.2 38,547 - -2.0 38,564 + -0.8 38,599 + +0.9 38,599 + +0.5 38,599 + -1.2 38,603 - +1.9 38,634 - -1.9 38,635 + +0.5 38,636 - -0.8 38,665 + -0.7 38,666 - +0.2 38,669 - -1.5 38,669 - +0.6 38,686 + -0.5 38,688 + +0.6 38,711 + +0.9 38,712 - -0.1 38,712 - +2.0 38,712 - +1.9 38,721 + +2.1 38,721 + -1.4 38,749 + HMPREF1078_RS16635 0.12 +1.7 38,822 + HMPREF1078_RS16635 0.21 -1.2 38,822 + HMPREF1078_RS16635 0.21 -2.1 38,823 - HMPREF1078_RS16635 0.21 +1.0 38,850 + HMPREF1078_RS16635 0.24 -2.3 38,891 + HMPREF1078_RS16635 0.29 +0.5 38,914 + HMPREF1078_RS16635 0.32 +0.9 38,914 + HMPREF1078_RS16635 0.32 -2.5 38,915 - HMPREF1078_RS16635 0.32 +0.9 38,957 - HMPREF1078_RS16635 0.37 +1.2 38,957 - HMPREF1078_RS16635 0.37 +0.5 38,994 - HMPREF1078_RS16635 0.42 -1.1 38,994 - HMPREF1078_RS16635 0.42 +0.3 39,007 - HMPREF1078_RS16635 0.43 -1.0 39,038 + HMPREF1078_RS16635 0.47 -0.8 39,059 - HMPREF1078_RS16635 0.50 +2.0 39,060 + HMPREF1078_RS16635 0.50 +1.8 39,060 + HMPREF1078_RS16635 0.50 -0.2 39,060 + HMPREF1078_RS16635 0.50 +0.2 39,060 + HMPREF1078_RS16635 0.50 +1.7 39,061 - HMPREF1078_RS16635 0.50 -2.0 39,061 - HMPREF1078_RS16635 0.50 +0.4 39,061 - HMPREF1078_RS16635 0.50 +2.0 39,075 - HMPREF1078_RS16635 0.52 -0.4 39,176 + HMPREF1078_RS16635 0.64 +0.3 39,265 + HMPREF1078_RS16635 0.75 -0.2 39,298 + HMPREF1078_RS16635 0.79 -1.8 39,298 + HMPREF1078_RS16635 0.79 +0.0 39,374 + HMPREF1078_RS16635 0.88 +1.3 39,374 + HMPREF1078_RS16635 0.88 +1.7 39,375 - HMPREF1078_RS16635 0.88 +0.6 39,426 - +1.4
Or see this region's nucleotide sequence