Experiment: .-Glucan from yeast 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1078_RS06350 and HMPREF1078_RS06355 are separated by 408 nucleotides HMPREF1078_RS06355 and HMPREF1078_RS06360 are separated by 383 nucleotides
HMPREF1078_RS06350: HMPREF1078_RS06350 - DUF1080 domain-containing protein, at 633,639 to 635,054
_RS06350
HMPREF1078_RS06355: HMPREF1078_RS06355 - TolB family protein, at 635,463 to 636,386
_RS06355
HMPREF1078_RS06360: HMPREF1078_RS06360 - acyltransferase, at 636,770 to 637,912
_RS06360
Position (kb) 635
636
637 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 634.508 kb on + strand, within HMPREF1078_RS06350 at 634.508 kb on + strand, within HMPREF1078_RS06350 at 634.554 kb on + strand, within HMPREF1078_RS06350 at 634.609 kb on + strand, within HMPREF1078_RS06350 at 634.609 kb on + strand, within HMPREF1078_RS06350 at 634.610 kb on - strand, within HMPREF1078_RS06350 at 634.610 kb on - strand, within HMPREF1078_RS06350 at 634.611 kb on + strand, within HMPREF1078_RS06350 at 634.612 kb on - strand, within HMPREF1078_RS06350 at 634.627 kb on + strand, within HMPREF1078_RS06350 at 634.628 kb on - strand, within HMPREF1078_RS06350 at 634.633 kb on - strand, within HMPREF1078_RS06350 at 634.656 kb on + strand, within HMPREF1078_RS06350 at 634.656 kb on + strand, within HMPREF1078_RS06350 at 634.656 kb on + strand, within HMPREF1078_RS06350 at 634.656 kb on + strand, within HMPREF1078_RS06350 at 634.656 kb on + strand, within HMPREF1078_RS06350 at 634.656 kb on + strand, within HMPREF1078_RS06350 at 634.657 kb on - strand, within HMPREF1078_RS06350 at 634.657 kb on - strand, within HMPREF1078_RS06350 at 634.657 kb on - strand, within HMPREF1078_RS06350 at 634.657 kb on - strand, within HMPREF1078_RS06350 at 634.657 kb on - strand, within HMPREF1078_RS06350 at 634.657 kb on - strand, within HMPREF1078_RS06350 at 634.658 kb on + strand, within HMPREF1078_RS06350 at 634.659 kb on - strand, within HMPREF1078_RS06350 at 634.659 kb on - strand, within HMPREF1078_RS06350 at 634.659 kb on - strand, within HMPREF1078_RS06350 at 634.694 kb on + strand, within HMPREF1078_RS06350 at 634.758 kb on + strand, within HMPREF1078_RS06350 at 634.758 kb on + strand, within HMPREF1078_RS06350 at 634.805 kb on - strand, within HMPREF1078_RS06350 at 634.805 kb on - strand, within HMPREF1078_RS06350 at 634.818 kb on - strand, within HMPREF1078_RS06350 at 635.014 kb on + strand at 635.015 kb on - strand at 635.040 kb on + strand at 635.041 kb on - strand at 635.045 kb on + strand at 635.045 kb on + strand at 635.046 kb on - strand at 635.061 kb on - strand at 635.099 kb on - strand at 635.104 kb on + strand at 635.104 kb on + strand at 635.105 kb on - strand at 635.105 kb on - strand at 635.130 kb on + strand at 635.134 kb on + strand at 635.135 kb on - strand at 635.135 kb on - strand at 635.140 kb on + strand at 635.150 kb on + strand at 635.185 kb on - strand at 635.235 kb on + strand at 635.256 kb on + strand at 635.256 kb on + strand at 635.256 kb on + strand at 635.257 kb on - strand at 635.257 kb on - strand at 635.292 kb on + strand at 635.301 kb on - strand at 635.401 kb on + strand at 635.431 kb on + strand at 635.477 kb on + strand at 635.478 kb on - strand at 635.530 kb on + strand at 635.530 kb on + strand at 635.531 kb on - strand at 635.531 kb on - strand at 635.539 kb on + strand at 635.579 kb on - strand, within HMPREF1078_RS06355 at 635.644 kb on - strand, within HMPREF1078_RS06355 at 635.644 kb on - strand, within HMPREF1078_RS06355 at 635.646 kb on - strand, within HMPREF1078_RS06355 at 635.747 kb on - strand, within HMPREF1078_RS06355 at 635.747 kb on - strand, within HMPREF1078_RS06355 at 635.747 kb on - strand, within HMPREF1078_RS06355 at 635.768 kb on - strand, within HMPREF1078_RS06355 at 635.768 kb on - strand, within HMPREF1078_RS06355 at 635.768 kb on - strand, within HMPREF1078_RS06355 at 635.771 kb on + strand, within HMPREF1078_RS06355 at 635.811 kb on + strand, within HMPREF1078_RS06355 at 635.812 kb on - strand, within HMPREF1078_RS06355 at 635.868 kb on + strand, within HMPREF1078_RS06355 at 635.868 kb on + strand, within HMPREF1078_RS06355 at 635.868 kb on + strand, within HMPREF1078_RS06355 at 635.869 kb on - strand, within HMPREF1078_RS06355 at 635.932 kb on - strand, within HMPREF1078_RS06355 at 636.030 kb on + strand, within HMPREF1078_RS06355 at 636.032 kb on + strand, within HMPREF1078_RS06355 at 636.176 kb on + strand, within HMPREF1078_RS06355 at 636.178 kb on + strand, within HMPREF1078_RS06355 at 636.183 kb on + strand, within HMPREF1078_RS06355 at 636.224 kb on + strand, within HMPREF1078_RS06355 at 636.278 kb on - strand, within HMPREF1078_RS06355 at 636.336 kb on - strand at 636.357 kb on + strand at 636.426 kb on + strand at 636.450 kb on + strand at 636.453 kb on - strand at 636.519 kb on + strand at 636.519 kb on + strand at 636.520 kb on - strand at 636.520 kb on - strand at 636.526 kb on + strand at 636.533 kb on + strand at 636.533 kb on + strand at 636.538 kb on + strand at 636.538 kb on + strand at 636.703 kb on + strand at 636.729 kb on + strand at 636.730 kb on - strand at 636.741 kb on + strand at 636.742 kb on - strand at 636.776 kb on + strand at 636.776 kb on + strand at 636.777 kb on - strand at 636.777 kb on - strand at 636.782 kb on - strand at 636.817 kb on + strand at 636.842 kb on - strand at 636.842 kb on - strand at 636.842 kb on - strand at 636.842 kb on - strand at 636.875 kb on - strand at 636.902 kb on - strand, within HMPREF1078_RS06360 at 636.902 kb on - strand, within HMPREF1078_RS06360 at 636.903 kb on + strand, within HMPREF1078_RS06360 at 636.904 kb on - strand, within HMPREF1078_RS06360 at 636.936 kb on + strand, within HMPREF1078_RS06360 at 636.994 kb on + strand, within HMPREF1078_RS06360 at 637.001 kb on + strand, within HMPREF1078_RS06360 at 637.001 kb on + strand, within HMPREF1078_RS06360 at 637.059 kb on + strand, within HMPREF1078_RS06360 at 637.060 kb on - strand, within HMPREF1078_RS06360 at 637.063 kb on + strand, within HMPREF1078_RS06360 at 637.063 kb on + strand, within HMPREF1078_RS06360 at 637.063 kb on + strand, within HMPREF1078_RS06360 at 637.064 kb on - strand, within HMPREF1078_RS06360 at 637.064 kb on - strand, within HMPREF1078_RS06360 at 637.111 kb on + strand, within HMPREF1078_RS06360 at 637.113 kb on + strand, within HMPREF1078_RS06360 at 637.127 kb on + strand, within HMPREF1078_RS06360 at 637.128 kb on - strand, within HMPREF1078_RS06360 at 637.128 kb on - strand, within HMPREF1078_RS06360 at 637.133 kb on - strand, within HMPREF1078_RS06360 at 637.140 kb on + strand, within HMPREF1078_RS06360 at 637.212 kb on + strand, within HMPREF1078_RS06360 at 637.213 kb on - strand, within HMPREF1078_RS06360 at 637.328 kb on - strand, within HMPREF1078_RS06360 at 637.361 kb on + strand, within HMPREF1078_RS06360 at 637.361 kb on - strand, within HMPREF1078_RS06360 at 637.361 kb on - strand, within HMPREF1078_RS06360
Per-strain Table
Position Strand Gene LocusTag Fraction .-Glucan from yeast 2.5 mg/mL (C) remove 634,508 + HMPREF1078_RS06350 0.61 +2.0 634,508 + HMPREF1078_RS06350 0.61 +0.0 634,554 + HMPREF1078_RS06350 0.65 -2.1 634,609 + HMPREF1078_RS06350 0.69 -0.4 634,609 + HMPREF1078_RS06350 0.69 +0.1 634,610 - HMPREF1078_RS06350 0.69 +1.1 634,610 - HMPREF1078_RS06350 0.69 -0.2 634,611 + HMPREF1078_RS06350 0.69 +0.5 634,612 - HMPREF1078_RS06350 0.69 -3.4 634,627 + HMPREF1078_RS06350 0.70 +1.6 634,628 - HMPREF1078_RS06350 0.70 -0.4 634,633 - HMPREF1078_RS06350 0.70 -0.7 634,656 + HMPREF1078_RS06350 0.72 +0.1 634,656 + HMPREF1078_RS06350 0.72 -0.7 634,656 + HMPREF1078_RS06350 0.72 -0.4 634,656 + HMPREF1078_RS06350 0.72 +0.2 634,656 + HMPREF1078_RS06350 0.72 -0.9 634,656 + HMPREF1078_RS06350 0.72 +1.8 634,657 - HMPREF1078_RS06350 0.72 -0.4 634,657 - HMPREF1078_RS06350 0.72 +0.8 634,657 - HMPREF1078_RS06350 0.72 -0.2 634,657 - HMPREF1078_RS06350 0.72 +1.0 634,657 - HMPREF1078_RS06350 0.72 -1.2 634,657 - HMPREF1078_RS06350 0.72 -2.1 634,658 + HMPREF1078_RS06350 0.72 -1.7 634,659 - HMPREF1078_RS06350 0.72 +1.2 634,659 - HMPREF1078_RS06350 0.72 +0.3 634,659 - HMPREF1078_RS06350 0.72 +1.1 634,694 + HMPREF1078_RS06350 0.75 -1.0 634,758 + HMPREF1078_RS06350 0.79 +3.2 634,758 + HMPREF1078_RS06350 0.79 +0.2 634,805 - HMPREF1078_RS06350 0.82 +2.7 634,805 - HMPREF1078_RS06350 0.82 -1.5 634,818 - HMPREF1078_RS06350 0.83 -2.8 635,014 + +1.6 635,015 - -0.5 635,040 + -0.2 635,041 - +1.0 635,045 + -0.0 635,045 + -3.6 635,046 - +0.7 635,061 - +2.0 635,099 - +0.4 635,104 + +1.5 635,104 + -3.0 635,105 - +0.6 635,105 - -0.1 635,130 + +0.6 635,134 + -3.5 635,135 - -1.2 635,135 - +0.4 635,140 + -2.0 635,150 + -0.3 635,185 - +0.6 635,235 + -0.2 635,256 + +0.6 635,256 + -1.6 635,256 + -2.6 635,257 - +2.8 635,257 - -0.5 635,292 + -1.6 635,301 - +0.7 635,401 + +1.7 635,431 + -1.0 635,477 + +0.0 635,478 - +2.7 635,530 + +0.1 635,530 + -1.7 635,531 - +0.7 635,531 - -0.0 635,539 + +0.4 635,579 - HMPREF1078_RS06355 0.13 +1.4 635,644 - HMPREF1078_RS06355 0.20 -0.6 635,644 - HMPREF1078_RS06355 0.20 -1.7 635,646 - HMPREF1078_RS06355 0.20 +1.2 635,747 - HMPREF1078_RS06355 0.31 +0.1 635,747 - HMPREF1078_RS06355 0.31 +0.5 635,747 - HMPREF1078_RS06355 0.31 +2.2 635,768 - HMPREF1078_RS06355 0.33 +3.2 635,768 - HMPREF1078_RS06355 0.33 +2.6 635,768 - HMPREF1078_RS06355 0.33 +1.4 635,771 + HMPREF1078_RS06355 0.33 -2.5 635,811 + HMPREF1078_RS06355 0.38 +1.1 635,812 - HMPREF1078_RS06355 0.38 +0.9 635,868 + HMPREF1078_RS06355 0.44 -2.7 635,868 + HMPREF1078_RS06355 0.44 -1.2 635,868 + HMPREF1078_RS06355 0.44 -0.2 635,869 - HMPREF1078_RS06355 0.44 +1.4 635,932 - HMPREF1078_RS06355 0.51 -1.4 636,030 + HMPREF1078_RS06355 0.61 +0.6 636,032 + HMPREF1078_RS06355 0.62 -0.1 636,176 + HMPREF1078_RS06355 0.77 -1.1 636,178 + HMPREF1078_RS06355 0.77 -3.5 636,183 + HMPREF1078_RS06355 0.78 -1.1 636,224 + HMPREF1078_RS06355 0.82 +0.5 636,278 - HMPREF1078_RS06355 0.88 -2.3 636,336 - +1.0 636,357 + +0.7 636,426 + +0.5 636,450 + -0.1 636,453 - -2.9 636,519 + -2.3 636,519 + +0.6 636,520 - -0.0 636,520 - -1.9 636,526 + +2.2 636,533 + -0.4 636,533 + +1.4 636,538 + -0.0 636,538 + -1.9 636,703 + +0.4 636,729 + +1.4 636,730 - +1.1 636,741 + -1.4 636,742 - +0.5 636,776 + -1.6 636,776 + +0.3 636,777 - +0.7 636,777 - -1.0 636,782 - -1.1 636,817 + -0.0 636,842 - +0.9 636,842 - -0.1 636,842 - +1.1 636,842 - -1.0 636,875 - -1.7 636,902 - HMPREF1078_RS06360 0.12 -1.2 636,902 - HMPREF1078_RS06360 0.12 +0.4 636,903 + HMPREF1078_RS06360 0.12 +1.3 636,904 - HMPREF1078_RS06360 0.12 +0.2 636,936 + HMPREF1078_RS06360 0.15 +0.8 636,994 + HMPREF1078_RS06360 0.20 +1.7 637,001 + HMPREF1078_RS06360 0.20 +1.0 637,001 + HMPREF1078_RS06360 0.20 -3.0 637,059 + HMPREF1078_RS06360 0.25 -0.2 637,060 - HMPREF1078_RS06360 0.25 -1.1 637,063 + HMPREF1078_RS06360 0.26 -0.5 637,063 + HMPREF1078_RS06360 0.26 +0.7 637,063 + HMPREF1078_RS06360 0.26 -1.3 637,064 - HMPREF1078_RS06360 0.26 +1.3 637,064 - HMPREF1078_RS06360 0.26 +2.2 637,111 + HMPREF1078_RS06360 0.30 +1.9 637,113 + HMPREF1078_RS06360 0.30 +0.3 637,127 + HMPREF1078_RS06360 0.31 -3.8 637,128 - HMPREF1078_RS06360 0.31 +0.4 637,128 - HMPREF1078_RS06360 0.31 -0.0 637,133 - HMPREF1078_RS06360 0.32 +1.0 637,140 + HMPREF1078_RS06360 0.32 -0.8 637,212 + HMPREF1078_RS06360 0.39 +0.6 637,213 - HMPREF1078_RS06360 0.39 -1.4 637,328 - HMPREF1078_RS06360 0.49 +0.5 637,361 + HMPREF1078_RS06360 0.52 -1.5 637,361 - HMPREF1078_RS06360 0.52 -0.5 637,361 - HMPREF1078_RS06360 0.52 -1.3
Or see this region's nucleotide sequence