Experiment: .-Glucan from yeast 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HMPREF1078_RS04750 and HMPREF1078_RS04755 are separated by 153 nucleotides HMPREF1078_RS04755 and HMPREF1078_RS04760 are separated by 33 nucleotides HMPREF1078_RS04760 and HMPREF1078_RS04765 are separated by 125 nucleotides HMPREF1078_RS04765 and HMPREF1078_RS04770 overlap by 8 nucleotides
HMPREF1078_RS04750: HMPREF1078_RS04750 - RNA polymerase sigma-70 factor, at 201,490 to 202,059
_RS04750
HMPREF1078_RS04755: HMPREF1078_RS04755 - hypothetical protein, at 202,213 to 202,422
_RS04755
HMPREF1078_RS04760: HMPREF1078_RS04760 - GH92 family glycosyl hydrolase, at 202,456 to 204,663
_RS04760
HMPREF1078_RS04765: HMPREF1078_RS04765 - biotin--[acetyl-CoA-carboxylase] ligase, at 204,789 to 205,544
_RS04765
HMPREF1078_RS04770: HMPREF1078_RS04770 - MmcQ/YjbR family DNA-binding protein, at 205,537 to 205,893
_RS04770
Position (kb) 202
203
204
205 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 201.488 kb on + strand at 201.488 kb on + strand at 201.571 kb on - strand, within HMPREF1078_RS04750 at 201.601 kb on - strand, within HMPREF1078_RS04750 at 201.679 kb on + strand, within HMPREF1078_RS04750 at 201.742 kb on - strand, within HMPREF1078_RS04750 at 201.809 kb on - strand, within HMPREF1078_RS04750 at 201.840 kb on - strand, within HMPREF1078_RS04750 at 201.870 kb on + strand, within HMPREF1078_RS04750 at 201.926 kb on + strand, within HMPREF1078_RS04750 at 201.926 kb on + strand, within HMPREF1078_RS04750 at 201.927 kb on - strand, within HMPREF1078_RS04750 at 201.963 kb on + strand, within HMPREF1078_RS04750 at 201.964 kb on - strand, within HMPREF1078_RS04750 at 201.973 kb on + strand, within HMPREF1078_RS04750 at 201.974 kb on - strand, within HMPREF1078_RS04750 at 201.977 kb on + strand, within HMPREF1078_RS04750 at 201.977 kb on + strand, within HMPREF1078_RS04750 at 201.977 kb on + strand, within HMPREF1078_RS04750 at 201.978 kb on - strand, within HMPREF1078_RS04750 at 201.978 kb on - strand, within HMPREF1078_RS04750 at 201.978 kb on - strand, within HMPREF1078_RS04750 at 202.008 kb on + strand at 202.010 kb on + strand at 202.010 kb on + strand at 202.011 kb on - strand at 202.011 kb on - strand at 202.030 kb on - strand at 202.040 kb on - strand at 202.057 kb on + strand at 202.059 kb on + strand at 202.060 kb on - strand at 202.060 kb on - strand at 202.063 kb on + strand at 202.063 kb on + strand at 202.064 kb on - strand at 202.064 kb on - strand at 202.064 kb on - strand at 202.066 kb on - strand at 202.066 kb on - strand at 202.090 kb on + strand at 202.090 kb on + strand at 202.090 kb on + strand at 202.090 kb on + strand at 202.091 kb on - strand at 202.091 kb on - strand at 202.094 kb on + strand at 202.094 kb on + strand at 202.095 kb on - strand at 202.196 kb on - strand at 202.223 kb on + strand at 202.224 kb on - strand at 202.230 kb on - strand at 202.245 kb on - strand, within HMPREF1078_RS04755 at 202.263 kb on + strand, within HMPREF1078_RS04755 at 202.272 kb on - strand, within HMPREF1078_RS04755 at 202.306 kb on + strand, within HMPREF1078_RS04755 at 202.310 kb on + strand, within HMPREF1078_RS04755 at 202.310 kb on + strand, within HMPREF1078_RS04755 at 202.311 kb on - strand, within HMPREF1078_RS04755 at 202.311 kb on - strand, within HMPREF1078_RS04755 at 202.315 kb on + strand, within HMPREF1078_RS04755 at 202.316 kb on - strand, within HMPREF1078_RS04755 at 202.325 kb on + strand, within HMPREF1078_RS04755 at 202.451 kb on - strand at 202.546 kb on + strand at 202.556 kb on - strand at 202.560 kb on + strand at 202.628 kb on + strand at 202.666 kb on + strand at 202.666 kb on + strand at 202.680 kb on + strand, within HMPREF1078_RS04760 at 202.684 kb on + strand, within HMPREF1078_RS04760 at 202.794 kb on + strand, within HMPREF1078_RS04760 at 202.794 kb on + strand, within HMPREF1078_RS04760 at 202.794 kb on + strand, within HMPREF1078_RS04760 at 202.795 kb on - strand, within HMPREF1078_RS04760 at 202.795 kb on - strand, within HMPREF1078_RS04760 at 202.795 kb on - strand, within HMPREF1078_RS04760 at 202.801 kb on - strand, within HMPREF1078_RS04760 at 202.844 kb on - strand, within HMPREF1078_RS04760 at 202.867 kb on + strand, within HMPREF1078_RS04760 at 202.919 kb on - strand, within HMPREF1078_RS04760 at 203.009 kb on + strand, within HMPREF1078_RS04760 at 203.009 kb on + strand, within HMPREF1078_RS04760 at 203.056 kb on - strand, within HMPREF1078_RS04760 at 203.056 kb on - strand, within HMPREF1078_RS04760 at 203.116 kb on + strand, within HMPREF1078_RS04760 at 203.118 kb on + strand, within HMPREF1078_RS04760 at 203.172 kb on - strand, within HMPREF1078_RS04760 at 203.352 kb on + strand, within HMPREF1078_RS04760 at 203.353 kb on - strand, within HMPREF1078_RS04760 at 203.358 kb on - strand, within HMPREF1078_RS04760 at 203.377 kb on + strand, within HMPREF1078_RS04760 at 203.378 kb on - strand, within HMPREF1078_RS04760 at 203.389 kb on + strand, within HMPREF1078_RS04760 at 203.389 kb on + strand, within HMPREF1078_RS04760 at 203.389 kb on + strand, within HMPREF1078_RS04760 at 203.390 kb on - strand, within HMPREF1078_RS04760 at 203.410 kb on - strand, within HMPREF1078_RS04760 at 203.457 kb on + strand, within HMPREF1078_RS04760 at 203.458 kb on - strand, within HMPREF1078_RS04760 at 203.463 kb on + strand, within HMPREF1078_RS04760 at 203.464 kb on - strand, within HMPREF1078_RS04760 at 203.464 kb on - strand, within HMPREF1078_RS04760 at 203.483 kb on - strand, within HMPREF1078_RS04760 at 203.485 kb on + strand, within HMPREF1078_RS04760 at 203.512 kb on + strand, within HMPREF1078_RS04760 at 203.535 kb on + strand, within HMPREF1078_RS04760 at 203.535 kb on + strand, within HMPREF1078_RS04760 at 203.535 kb on + strand, within HMPREF1078_RS04760 at 203.536 kb on - strand, within HMPREF1078_RS04760 at 203.536 kb on - strand, within HMPREF1078_RS04760 at 203.536 kb on - strand, within HMPREF1078_RS04760 at 203.536 kb on - strand, within HMPREF1078_RS04760 at 203.559 kb on - strand, within HMPREF1078_RS04760 at 203.791 kb on + strand, within HMPREF1078_RS04760 at 203.791 kb on + strand, within HMPREF1078_RS04760 at 203.791 kb on + strand, within HMPREF1078_RS04760 at 203.792 kb on - strand, within HMPREF1078_RS04760 at 203.863 kb on + strand, within HMPREF1078_RS04760 at 203.908 kb on + strand, within HMPREF1078_RS04760 at 204.003 kb on + strand, within HMPREF1078_RS04760 at 204.093 kb on - strand, within HMPREF1078_RS04760 at 204.232 kb on + strand, within HMPREF1078_RS04760 at 204.233 kb on - strand, within HMPREF1078_RS04760 at 204.253 kb on - strand, within HMPREF1078_RS04760 at 204.264 kb on - strand, within HMPREF1078_RS04760 at 204.268 kb on + strand, within HMPREF1078_RS04760 at 204.269 kb on - strand, within HMPREF1078_RS04760 at 204.337 kb on + strand, within HMPREF1078_RS04760 at 204.360 kb on - strand, within HMPREF1078_RS04760 at 204.399 kb on + strand, within HMPREF1078_RS04760 at 204.448 kb on + strand at 204.448 kb on + strand at 204.449 kb on - strand at 204.547 kb on + strand at 204.547 kb on + strand at 204.661 kb on + strand at 204.734 kb on + strand at 204.735 kb on - strand at 204.735 kb on - strand at 204.765 kb on + strand at 204.780 kb on + strand at 204.780 kb on + strand at 204.791 kb on - strand at 204.811 kb on - strand at 204.811 kb on - strand at 205.650 kb on - strand, within HMPREF1078_RS04770
Per-strain Table
Position Strand Gene LocusTag Fraction .-Glucan from yeast 2.5 mg/mL (C) remove 201,488 + +0.2 201,488 + -0.1 201,571 - HMPREF1078_RS04750 0.14 -1.6 201,601 - HMPREF1078_RS04750 0.19 +0.9 201,679 + HMPREF1078_RS04750 0.33 +0.7 201,742 - HMPREF1078_RS04750 0.44 -0.6 201,809 - HMPREF1078_RS04750 0.56 +1.0 201,840 - HMPREF1078_RS04750 0.61 +2.4 201,870 + HMPREF1078_RS04750 0.67 -0.2 201,926 + HMPREF1078_RS04750 0.76 -1.2 201,926 + HMPREF1078_RS04750 0.76 -0.9 201,927 - HMPREF1078_RS04750 0.77 +0.4 201,963 + HMPREF1078_RS04750 0.83 -1.3 201,964 - HMPREF1078_RS04750 0.83 -0.7 201,973 + HMPREF1078_RS04750 0.85 +1.0 201,974 - HMPREF1078_RS04750 0.85 +0.5 201,977 + HMPREF1078_RS04750 0.85 -4.2 201,977 + HMPREF1078_RS04750 0.85 +0.6 201,977 + HMPREF1078_RS04750 0.85 -1.0 201,978 - HMPREF1078_RS04750 0.86 +1.1 201,978 - HMPREF1078_RS04750 0.86 +0.4 201,978 - HMPREF1078_RS04750 0.86 +0.4 202,008 + -1.7 202,010 + +1.3 202,010 + -1.8 202,011 - +0.8 202,011 - +1.1 202,030 - -3.0 202,040 - +0.1 202,057 + +2.8 202,059 + +2.2 202,060 - -2.0 202,060 - -3.7 202,063 + +0.8 202,063 + +0.1 202,064 - +1.0 202,064 - -3.0 202,064 - +0.5 202,066 - -0.3 202,066 - -0.8 202,090 + -0.5 202,090 + -0.3 202,090 + -0.1 202,090 + +2.7 202,091 - -2.0 202,091 - -0.1 202,094 + -2.0 202,094 + -1.2 202,095 - +0.7 202,196 - +1.7 202,223 + -0.5 202,224 - +0.6 202,230 - +1.1 202,245 - HMPREF1078_RS04755 0.15 -0.6 202,263 + HMPREF1078_RS04755 0.24 +0.0 202,272 - HMPREF1078_RS04755 0.28 -1.0 202,306 + HMPREF1078_RS04755 0.44 +1.1 202,310 + HMPREF1078_RS04755 0.46 +0.4 202,310 + HMPREF1078_RS04755 0.46 -0.3 202,311 - HMPREF1078_RS04755 0.47 +0.9 202,311 - HMPREF1078_RS04755 0.47 -1.0 202,315 + HMPREF1078_RS04755 0.49 +0.6 202,316 - HMPREF1078_RS04755 0.49 +0.2 202,325 + HMPREF1078_RS04755 0.53 -0.6 202,451 - +1.6 202,546 + +1.4 202,556 - -0.6 202,560 + +0.9 202,628 + -0.2 202,666 + -2.3 202,666 + -0.1 202,680 + HMPREF1078_RS04760 0.10 +0.2 202,684 + HMPREF1078_RS04760 0.10 +1.9 202,794 + HMPREF1078_RS04760 0.15 +1.5 202,794 + HMPREF1078_RS04760 0.15 +0.3 202,794 + HMPREF1078_RS04760 0.15 -0.3 202,795 - HMPREF1078_RS04760 0.15 +2.0 202,795 - HMPREF1078_RS04760 0.15 -0.9 202,795 - HMPREF1078_RS04760 0.15 -0.3 202,801 - HMPREF1078_RS04760 0.16 +0.3 202,844 - HMPREF1078_RS04760 0.18 -2.0 202,867 + HMPREF1078_RS04760 0.19 -2.5 202,919 - HMPREF1078_RS04760 0.21 +1.5 203,009 + HMPREF1078_RS04760 0.25 -2.4 203,009 + HMPREF1078_RS04760 0.25 -1.9 203,056 - HMPREF1078_RS04760 0.27 +2.5 203,056 - HMPREF1078_RS04760 0.27 -0.7 203,116 + HMPREF1078_RS04760 0.30 +1.6 203,118 + HMPREF1078_RS04760 0.30 -0.8 203,172 - HMPREF1078_RS04760 0.32 -0.3 203,352 + HMPREF1078_RS04760 0.41 +0.6 203,353 - HMPREF1078_RS04760 0.41 +1.1 203,358 - HMPREF1078_RS04760 0.41 -0.1 203,377 + HMPREF1078_RS04760 0.42 -0.4 203,378 - HMPREF1078_RS04760 0.42 +0.9 203,389 + HMPREF1078_RS04760 0.42 -2.4 203,389 + HMPREF1078_RS04760 0.42 -2.5 203,389 + HMPREF1078_RS04760 0.42 +0.3 203,390 - HMPREF1078_RS04760 0.42 -0.9 203,410 - HMPREF1078_RS04760 0.43 +0.8 203,457 + HMPREF1078_RS04760 0.45 -0.8 203,458 - HMPREF1078_RS04760 0.45 +1.6 203,463 + HMPREF1078_RS04760 0.46 +0.7 203,464 - HMPREF1078_RS04760 0.46 -1.9 203,464 - HMPREF1078_RS04760 0.46 -2.4 203,483 - HMPREF1078_RS04760 0.47 +0.8 203,485 + HMPREF1078_RS04760 0.47 -2.1 203,512 + HMPREF1078_RS04760 0.48 +1.4 203,535 + HMPREF1078_RS04760 0.49 -3.0 203,535 + HMPREF1078_RS04760 0.49 -0.6 203,535 + HMPREF1078_RS04760 0.49 +0.6 203,536 - HMPREF1078_RS04760 0.49 +0.1 203,536 - HMPREF1078_RS04760 0.49 -0.8 203,536 - HMPREF1078_RS04760 0.49 +0.1 203,536 - HMPREF1078_RS04760 0.49 +1.2 203,559 - HMPREF1078_RS04760 0.50 -3.5 203,791 + HMPREF1078_RS04760 0.60 -1.6 203,791 + HMPREF1078_RS04760 0.60 -0.0 203,791 + HMPREF1078_RS04760 0.60 +0.3 203,792 - HMPREF1078_RS04760 0.61 +0.9 203,863 + HMPREF1078_RS04760 0.64 +0.0 203,908 + HMPREF1078_RS04760 0.66 -1.0 204,003 + HMPREF1078_RS04760 0.70 +0.5 204,093 - HMPREF1078_RS04760 0.74 +1.9 204,232 + HMPREF1078_RS04760 0.80 +2.0 204,233 - HMPREF1078_RS04760 0.80 -1.9 204,253 - HMPREF1078_RS04760 0.81 -1.8 204,264 - HMPREF1078_RS04760 0.82 +0.3 204,268 + HMPREF1078_RS04760 0.82 -0.3 204,269 - HMPREF1078_RS04760 0.82 -0.8 204,337 + HMPREF1078_RS04760 0.85 +1.3 204,360 - HMPREF1078_RS04760 0.86 -0.6 204,399 + HMPREF1078_RS04760 0.88 -2.7 204,448 + +1.3 204,448 + -2.0 204,449 - +0.2 204,547 + +0.8 204,547 + -1.9 204,661 + -0.3 204,734 + +1.0 204,735 - -0.1 204,735 - -0.3 204,765 + +0.4 204,780 + +1.2 204,780 + -2.9 204,791 - +1.7 204,811 - -3.3 204,811 - +0.2 205,650 - HMPREF1078_RS04770 0.32 -2.0
Or see this region's nucleotide sequence