Strain Fitness in Parabacteroides merdae CL09T00C40 around HMPREF1078_RS04425

Experiment: D-Raffinose 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Raffinose 10 mg/mL (C)
116,457	-				+0.9
116,457	-				+0.1
116,457	-				-1.0
116,457	-				-1.1
116,471	-				-0.1
116,473	-				-2.5
116,473	-				+0.3
116,473	-				-0.9
116,473	-				+0.1
116,473	-				-0.5
116,487	-				+0.4
116,487	-				+0.3
116,487	-				+1.0
116,487	-				-2.1
116,488	+				+0.4
116,488	+				+0.3
116,489	-				+0.7
116,489	-				+0.3
116,489	-				-0.6
116,491	-				+0.6
116,491	-				-0.2
116,646	+				-1.0
116,651	+				+0.6
116,652	-				-0.8
116,652	-				+0.5
116,654	-				-0.1
116,654	-				-1.8
116,852	+		HMPREF1078_RS04425	0.22	-0.4
116,852	+		HMPREF1078_RS04425	0.22	-0.3
116,896	+		HMPREF1078_RS04425	0.25	-1.3
116,897	-		HMPREF1078_RS04425	0.25	+1.5
116,897	-		HMPREF1078_RS04425	0.25	+0.1
116,897	-		HMPREF1078_RS04425	0.25	-1.3
116,900	+		HMPREF1078_RS04425	0.25	+0.5
116,927	+		HMPREF1078_RS04425	0.27	-0.2
116,943	-		HMPREF1078_RS04425	0.28	-0.2
117,043	+		HMPREF1078_RS04425	0.34	+0.4
117,043	+		HMPREF1078_RS04425	0.34	-0.1
117,043	+		HMPREF1078_RS04425	0.34	-0.2
117,109	+		HMPREF1078_RS04425	0.38	-0.8
117,242	+		HMPREF1078_RS04425	0.47	-0.7
117,253	+		HMPREF1078_RS04425	0.48	-1.9
117,256	+		HMPREF1078_RS04425	0.48	-0.3
117,268	+		HMPREF1078_RS04425	0.49	-1.0
117,291	+		HMPREF1078_RS04425	0.50	-0.9
117,292	-		HMPREF1078_RS04425	0.50	-1.8
117,292	-		HMPREF1078_RS04425	0.50	-0.4
117,295	+		HMPREF1078_RS04425	0.50	-1.7
117,295	+		HMPREF1078_RS04425	0.50	+0.2
117,295	+		HMPREF1078_RS04425	0.50	-0.9
117,295	+		HMPREF1078_RS04425	0.50	-1.0
117,295	+		HMPREF1078_RS04425	0.50	-1.0
117,295	+		HMPREF1078_RS04425	0.50	-0.5
117,296	-		HMPREF1078_RS04425	0.50	-1.2
117,296	-		HMPREF1078_RS04425	0.50	-1.9
117,320	-		HMPREF1078_RS04425	0.52	-0.4
117,397	+		HMPREF1078_RS04425	0.57	+0.4
117,398	-		HMPREF1078_RS04425	0.57	+0.5
117,398	-		HMPREF1078_RS04425	0.57	-1.0
117,428	-		HMPREF1078_RS04425	0.59	+0.1
117,436	+		HMPREF1078_RS04425	0.59	-0.3
117,436	+		HMPREF1078_RS04425	0.59	+1.2
117,437	-		HMPREF1078_RS04425	0.60	-0.8
117,437	-		HMPREF1078_RS04425	0.60	+0.6
117,437	-		HMPREF1078_RS04425	0.60	-0.6
117,440	+		HMPREF1078_RS04425	0.60	+0.5
117,440	+		HMPREF1078_RS04425	0.60	+0.3
117,441	-		HMPREF1078_RS04425	0.60	+0.6
117,441	-		HMPREF1078_RS04425	0.60	-1.9
117,441	-		HMPREF1078_RS04425	0.60	-0.1
117,523	+		HMPREF1078_RS04425	0.65	+0.4
117,523	+		HMPREF1078_RS04425	0.65	-0.8
117,524	-		HMPREF1078_RS04425	0.65	-0.6
117,524	-		HMPREF1078_RS04425	0.65	-0.7
117,525	+		HMPREF1078_RS04425	0.65	-0.7
117,526	-		HMPREF1078_RS04425	0.65	-0.8
117,526	-		HMPREF1078_RS04425	0.65	-0.7
117,619	+		HMPREF1078_RS04425	0.71	-0.8
117,620	-		HMPREF1078_RS04425	0.71	-0.4
117,641	+		HMPREF1078_RS04425	0.73	-0.6
117,698	+		HMPREF1078_RS04425	0.76	-1.7
117,698	+		HMPREF1078_RS04425	0.76	-0.2
117,698	+		HMPREF1078_RS04425	0.76	-0.7
117,699	-		HMPREF1078_RS04425	0.76	+0.4
117,699	-		HMPREF1078_RS04425	0.76	-1.5
117,699	-		HMPREF1078_RS04425	0.76	+0.6
117,700	+		HMPREF1078_RS04425	0.76	+0.6
117,730	+		HMPREF1078_RS04425	0.78	+0.5
117,731	-		HMPREF1078_RS04425	0.78	+0.1
117,731	-		HMPREF1078_RS04425	0.78	-0.8
117,764	-		HMPREF1078_RS04425	0.81	-0.7
117,853	+		HMPREF1078_RS04425	0.86	-1.1
117,854	-		HMPREF1078_RS04425	0.86	-0.2
117,854	-		HMPREF1078_RS04425	0.86	-0.7
117,931	-				-0.7
117,993	+				-0.1
117,995	+				-0.3
117,995	+				+0.2
118,891	-				-2.3
118,935	-		HMPREF1078_RS04435	0.12	+0.5
119,059	-		HMPREF1078_RS04435	0.26	+0.2
119,059	-		HMPREF1078_RS04435	0.26	-1.1