Strain Fitness in Parabacteroides merdae CL09T00C40 around HMPREF1078_RS04555

Experiment: D-Mannose 10 mg/mL (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Mannose 10 mg/mL (C)
142,767	-				+0.0
142,791	-				-0.0
142,793	-				-0.7
142,810	+				+1.3
142,821	+				-2.0
142,830	+				-1.4
142,830	+				-0.1
142,831	-				-2.9
142,834	+				-1.0
142,834	+				-0.4
142,834	+				-1.5
142,835	-				-3.5
142,835	-				-1.1
142,850	-				-3.5
142,891	-				-2.5
142,895	-				-4.0
142,895	-				-0.9
143,639	-				-0.4
143,639	-				-3.2
143,646	-				-0.4
143,646	-				+1.8
143,651	-				-0.9
143,651	-				-0.9
143,697	-				-1.0
143,702	-				-2.9
143,718	-				-4.8
143,721	-				-1.8
143,726	-				-4.3
143,734	-				-4.0
143,734	-				-4.7
143,955	-		HMPREF1078_RS04555	0.21	-2.6
143,983	-		HMPREF1078_RS04555	0.23	-1.7
143,983	-		HMPREF1078_RS04555	0.23	-2.8
143,983	-		HMPREF1078_RS04555	0.23	-5.0
143,983	-		HMPREF1078_RS04555	0.23	-3.7
143,983	-		HMPREF1078_RS04555	0.23	-4.2
144,031	-		HMPREF1078_RS04555	0.26	-4.2
144,031	-		HMPREF1078_RS04555	0.26	-3.0
144,056	-		HMPREF1078_RS04555	0.28	-3.5
144,056	-		HMPREF1078_RS04555	0.28	-4.8
144,200	-		HMPREF1078_RS04555	0.37	-2.0
144,353	-		HMPREF1078_RS04555	0.47	-1.3
144,355	-		HMPREF1078_RS04555	0.47	-1.6
144,384	-		HMPREF1078_RS04555	0.49	-0.9
144,408	-		HMPREF1078_RS04555	0.50	-3.6
144,413	-		HMPREF1078_RS04555	0.51	-1.0
144,436	-		HMPREF1078_RS04555	0.52	-2.3
144,525	-		HMPREF1078_RS04555	0.58	-1.6
144,536	-		HMPREF1078_RS04555	0.58	-2.8
144,631	-		HMPREF1078_RS04555	0.65	-3.3
144,635	-		HMPREF1078_RS04555	0.65	-5.7
144,773	-		HMPREF1078_RS04555	0.74	-3.6
144,782	-		HMPREF1078_RS04555	0.74	-3.2
144,782	-		HMPREF1078_RS04555	0.74	-1.0
144,787	+		HMPREF1078_RS04555	0.75	-0.5
144,788	-		HMPREF1078_RS04555	0.75	-3.2
144,792	-		HMPREF1078_RS04555	0.75	-1.3
144,796	+		HMPREF1078_RS04555	0.75	-1.8
144,797	-		HMPREF1078_RS04555	0.75	-2.7
144,848	-		HMPREF1078_RS04555	0.79	-3.7
144,859	+		HMPREF1078_RS04555	0.79	-1.2
144,860	-		HMPREF1078_RS04555	0.79	-2.1
144,860	-		HMPREF1078_RS04555	0.79	-3.9
144,953	+		HMPREF1078_RS04555	0.85	-0.0
144,954	-		HMPREF1078_RS04555	0.85	-3.0
144,957	+		HMPREF1078_RS04555	0.86	-0.9
144,957	+		HMPREF1078_RS04555	0.86	-0.9
144,957	+		HMPREF1078_RS04555	0.86	-0.3
144,958	-		HMPREF1078_RS04555	0.86	-2.8
145,094	-				-2.7
145,094	-				-5.2
145,097	+				-1.7
145,098	-				-3.2
145,098	-				-3.3
145,098	-				-2.6
145,098	-				-2.4
145,102	-				-2.4
145,163	+				-0.5
145,180	+				+0.7
145,186	+				-1.6
145,187	-				+1.2
145,308	+				-2.4
145,331	+				-0.5
145,331	+				+0.9
145,332	-				-1.6
145,332	-				-0.8
145,332	-				-0.2
145,351	-				-0.5
145,351	-				-2.1
145,358	+				-0.8
145,374	+				+1.0
145,384	+				-0.2
145,396	+				-2.4
145,396	+				-0.7
145,396	+				+2.0
145,397	-				-2.0
145,424	+				+1.2
145,461	-				-0.9
145,466	+				+0.0
145,466	+				+0.4
145,481	+				+1.0
145,501	-				-2.3
145,514	-				-2.3
145,521	+				-0.2
145,537	-				-2.1
145,539	+				-1.3
145,603	+		HMPREF1078_RS04560	0.13	-1.2
145,603	+		HMPREF1078_RS04560	0.13	+0.0
145,714	-		HMPREF1078_RS04560	0.26	-0.3
145,727	-		HMPREF1078_RS04560	0.28	-1.2
145,749	+		HMPREF1078_RS04560	0.31	+0.5
145,749	+		HMPREF1078_RS04560	0.31	-0.6
145,749	+		HMPREF1078_RS04560	0.31	-0.0
145,749	+		HMPREF1078_RS04560	0.31	+0.5
145,750	-		HMPREF1078_RS04560	0.31	-1.5
145,750	-		HMPREF1078_RS04560	0.31	-1.3
145,947	-		HMPREF1078_RS04560	0.55	-1.1
145,947	-		HMPREF1078_RS04560	0.55	-0.4
145,986	+		HMPREF1078_RS04560	0.59	-2.2
146,013	+		HMPREF1078_RS04560	0.63	-2.0
146,099	-		HMPREF1078_RS04560	0.73	-1.7
146,159	+		HMPREF1078_RS04560	0.80	-1.0
146,160	-		HMPREF1078_RS04560	0.80	-1.1