Strain Fitness in Parabacteroides merdae CL09T00C40 around HMPREF1078_RS13395

Experiment: GAM 1 x (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	GAM 1 x (C)
114,087	-		HMPREF1078_RS13390	0.28	-1.0
114,173	+		HMPREF1078_RS13390	0.34	+1.1
114,250	+		HMPREF1078_RS13390	0.40	-0.4
114,250	+		HMPREF1078_RS13390	0.40	-0.2
114,251	-		HMPREF1078_RS13390	0.40	-1.0
114,251	-		HMPREF1078_RS13390	0.40	-0.6
114,253	-		HMPREF1078_RS13390	0.40	-0.5
114,621	+		HMPREF1078_RS13390	0.67	+0.5
114,626	+		HMPREF1078_RS13390	0.67	-0.6
114,626	+		HMPREF1078_RS13390	0.67	+0.5
114,626	+		HMPREF1078_RS13390	0.67	-1.6
114,626	+		HMPREF1078_RS13390	0.67	-0.5
114,656	+		HMPREF1078_RS13390	0.69	-0.6
114,897	-		HMPREF1078_RS13390	0.87	-0.8
114,897	-		HMPREF1078_RS13390	0.87	-0.5
114,897	-		HMPREF1078_RS13390	0.87	-0.8
114,946	+				-0.1
114,947	-				-1.0
115,250	-		HMPREF1078_RS13395	0.12	+0.2
115,381	+		HMPREF1078_RS13395	0.22	-1.9
115,382	-		HMPREF1078_RS13395	0.22	-0.8
115,382	-		HMPREF1078_RS13395	0.22	-0.7
115,382	-		HMPREF1078_RS13395	0.22	+0.4
115,427	-		HMPREF1078_RS13395	0.25	-1.3
115,575	+		HMPREF1078_RS13395	0.36	-0.4
116,134	+		HMPREF1078_RS13395	0.77	-0.8
116,208	+		HMPREF1078_RS13395	0.82	+0.5
116,209	-		HMPREF1078_RS13395	0.82	-0.1
116,209	-		HMPREF1078_RS13395	0.82	-0.6
116,213	-		HMPREF1078_RS13395	0.82	+0.1
116,213	-		HMPREF1078_RS13395	0.82	-0.5
116,213	-		HMPREF1078_RS13395	0.82	+0.0
116,246	-		HMPREF1078_RS13395	0.85	-0.9
116,291	+		HMPREF1078_RS13395	0.88	-0.2
116,428	+				-0.3
116,428	+				+0.3
116,487	-				+0.6
116,488	+				-0.6
116,489	-				+0.5
116,502	-				+0.7
116,648	+		HMPREF1078_RS13400	0.16	-0.7
116,648	+		HMPREF1078_RS13400	0.16	+0.1
116,671	-		HMPREF1078_RS13400	0.18	-0.6
116,671	-		HMPREF1078_RS13400	0.18	+0.2
116,695	-		HMPREF1078_RS13400	0.20	+0.2
116,724	+		HMPREF1078_RS13400	0.23	-1.6
116,769	+		HMPREF1078_RS13400	0.26	+0.5
117,030	+		HMPREF1078_RS13400	0.48	-0.5
117,349	-		HMPREF1078_RS13400	0.75	-0.2
117,399	+		HMPREF1078_RS13400	0.79	-1.2