Strain Fitness in Parabacteroides merdae CL09T00C40 around HMPREF1078_RS19855

Experiment: marine_broth_2216 1 x (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine_broth_2216 1 x (C)
107,814	+				-0.5
107,974	+				-2.4
107,974	+				+0.3
107,974	+				-0.3
107,975	-				-0.1
107,975	-				+0.7
107,975	-				-1.1
107,975	-				-1.0
107,993	-				-0.1
108,028	-				-0.5
108,042	+				-0.2
108,042	+				+0.8
108,042	+				+0.2
108,043	-				+1.0
108,065	+				-0.5
108,065	+				-3.0
108,070	+				-0.9
108,071	-				-2.6
108,106	+				+0.6
108,107	-				-1.4
108,110	+				+0.1
108,110	+				+0.8
108,111	-				+1.6
108,111	-				+0.5
108,111	-				-1.5
108,111	-				-0.6
108,111	-				+0.2
108,111	-				-0.7
108,111	-				-2.4
108,142	-				+0.4
108,247	+				-0.1
108,248	-				+0.5
108,353	-		HMPREF1078_RS19545	0.18	+1.8
108,355	+		HMPREF1078_RS19545	0.18	-1.1
108,355	+		HMPREF1078_RS19545	0.18	-0.0
108,360	+		HMPREF1078_RS19545	0.20	+1.0
108,361	-		HMPREF1078_RS19545	0.21	-0.1
108,415	-		HMPREF1078_RS19545	0.41	-0.8
108,456	+		HMPREF1078_RS19545	0.56	-0.8
108,456	+		HMPREF1078_RS19545	0.56	-1.0
108,458	+		HMPREF1078_RS19545	0.57	-1.6
108,482	+		HMPREF1078_RS19545	0.66	-2.6
108,524	+		HMPREF1078_RS19545	0.82	+0.7
108,524	+		HMPREF1078_RS19545	0.82	-1.1
108,525	-		HMPREF1078_RS19545	0.82	+0.2
108,557	+				-0.8
108,558	-				-0.8
108,558	-				-0.2
108,560	-				-1.9
108,604	+				-1.5
108,604	+				+0.4
108,627	+				+0.1
108,647	+				-2.1
108,682	+				-0.6
108,684	+				-0.3
108,684	+				-0.1
108,685	-				+0.0
108,685	-				+0.4
108,698	-				+0.2
108,699	+				-0.1
108,700	-				+0.4
108,707	+				-0.4
108,708	-				+0.1
108,709	+				-1.6
108,710	-				-0.5
108,727	+				-0.2
108,727	+				-1.5
108,733	+				+1.7
108,733	+				-0.3
108,733	+				-0.5
108,733	+				+0.3
108,733	+				+0.3
108,734	-				-0.0
108,734	-				-0.6
108,734	-				-2.3
108,734	-				-1.2
108,734	-				-1.9
108,734	-				-0.0
108,734	-				+0.4
108,734	-				+0.6
108,736	-				-0.1
108,736	-				-1.2
108,808	-				+0.7
108,855	+		HMPREF1078_RS19855	0.21	-0.2
108,856	-		HMPREF1078_RS19855	0.22	-1.2
108,859	-		HMPREF1078_RS19855	0.23	-1.7
108,869	-		HMPREF1078_RS19855	0.27	-1.5
109,124	+				-2.8
109,125	-				-2.2
109,125	-				+2.8
109,132	+				-1.1
109,133	-				+1.0
109,133	-				+0.7
109,133	-				+2.1
109,155	-				-0.7
109,171	+				+0.4
109,183	+				-1.5
109,200	+				+0.4
109,266	+				-0.4
109,267	-				-2.8
109,267	-				-3.6
109,267	-				+1.1
109,267	-				+0.8
109,302	-				+0.8
109,322	-				-0.3
109,353	-				-2.1
109,362	+				-0.8
109,362	+				-0.5
109,373	+				-0.1
109,401	+				-0.2
109,418	+				-1.1
109,427	+				+1.0
109,446	+				-0.2
109,447	-				-0.7
109,459	-				+0.0
109,482	-				-2.4
109,507	-				+1.8
109,552	-				-0.1
109,579	-				+0.7
109,579	-				+0.3
109,597	-				-0.3
109,634	-				-2.2
109,634	-				-1.1
109,639	+				+0.4
109,640	-				+1.0
109,643	+				-0.4
109,665	-				+0.6
109,684	+				+0.4
109,695	-				-2.1
109,696	+				+0.9
109,697	-				+0.0
109,697	-				-0.1
109,697	-				-1.2
109,697	-				-0.4
109,698	+				-0.1
109,698	+				+0.1
109,698	+				+1.3
109,698	+				-0.4
109,698	+				+0.0
109,698	+				+1.1
109,698	+				+1.6
109,698	+				-0.9
109,699	-				-0.3
109,699	-				+0.3
109,699	-				+0.2
109,699	-				+0.1
109,719	+				-2.2
109,738	+				-1.0
109,739	-				+0.4
109,759	-				-1.2
109,762	+				-2.3
109,764	+				-1.1
109,765	-				-0.4
109,776	+				+0.2
109,776	+				-2.0
109,776	+				-0.5
109,797	+				+0.4
109,806	-				-1.1
109,806	-				+0.6
109,842	+				-1.3
109,842	+				-0.7
109,843	-				+0.3
109,843	-				+0.2
109,843	-				-1.7
109,844	+				-0.6
109,845	-				+0.2
109,919	+				+0.5
109,928	+				-0.1
109,955	+				-0.6
109,983	+				+0.9
109,998	+				-1.2
109,999	-				+2.4