Strain Fitness in Parabacteroides merdae CL09T00C40 around HMPREF1078_RS19445

Experiment: marine_broth_2216 1 x (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine_broth_2216 1 x (C)
88,330	+				-0.0
88,439	-				+0.6
88,439	-				+0.2
88,439	-				+0.9
88,570	-				-0.9
88,597	+				+0.8
88,692	-				+0.6
88,692	-				-0.7
88,699	-		HMPREF1078_RS19445	0.13	-0.9
88,702	+		HMPREF1078_RS19445	0.15	+0.0
88,702	+		HMPREF1078_RS19445	0.15	-0.5
88,702	+		HMPREF1078_RS19445	0.15	-1.4
88,703	-		HMPREF1078_RS19445	0.15	-1.0
88,800	+		HMPREF1078_RS19445	0.80	-1.2
88,833	-				+1.0
88,833	-				+1.0
88,841	+				+0.1
88,842	-				+0.3
88,842	-				+0.3
88,884	+				-0.5
88,884	+				-0.4
88,884	+				+0.9
88,885	-				-0.3
88,931	+				-1.4
88,951	+				+1.6
88,953	+				-1.1
88,953	+				+0.6
89,213	+		HMPREF1078_RS00385	0.11	-0.0
89,245	+		HMPREF1078_RS00385	0.13	-1.1
89,247	+		HMPREF1078_RS00385	0.13	-1.0
89,314	-		HMPREF1078_RS00385	0.16	-0.2
89,318	-		HMPREF1078_RS00385	0.16	+0.6
89,523	-		HMPREF1078_RS00385	0.26	-0.7
89,637	-		HMPREF1078_RS00385	0.31	-0.4
89,720	-		HMPREF1078_RS00385	0.35	-0.0
89,727	-		HMPREF1078_RS00385	0.35	+0.5