Strain Fitness in Parabacteroides merdae CL09T00C40 around HMPREF1078_RS07905

Experiment: marine_broth_2216 1 x (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine_broth_2216 1 x (C)
137,554	+				-0.2
137,589	-				-1.8
137,589	-				-0.2
137,592	-				+2.2
137,602	-				-1.2
137,614	-				-0.2
137,627	+				-0.2
137,627	+				-0.2
137,648	+				+0.1
137,648	+				+0.4
137,648	+				-0.9
137,649	-				+0.5
138,261	-				-1.4
138,319	-				+0.4
138,319	-				+1.7
138,422	+				-1.3
138,437	+				-0.9
138,442	+				+0.7
138,460	+				-1.1
138,484	+				-0.4
138,553	+				+0.2
138,575	+				-0.1
138,682	+		HMPREF1078_RS07905	0.14	+0.1
138,684	+		HMPREF1078_RS07905	0.14	-1.1
138,712	+		HMPREF1078_RS07905	0.16	+0.1
138,712	+		HMPREF1078_RS07905	0.16	+0.4
139,089	+		HMPREF1078_RS07905	0.43	+0.8
139,400	+		HMPREF1078_RS07905	0.64	-0.9
139,400	+		HMPREF1078_RS07905	0.64	-0.4
139,454	+		HMPREF1078_RS07905	0.68	-1.1
139,454	+		HMPREF1078_RS07905	0.68	+0.7
139,454	+		HMPREF1078_RS07905	0.68	-0.8
139,469	+		HMPREF1078_RS07905	0.69	-0.2
139,523	+		HMPREF1078_RS07905	0.73	-0.4
139,549	+		HMPREF1078_RS07905	0.75	+0.1
139,627	+		HMPREF1078_RS07905	0.80	-1.5
139,690	+		HMPREF1078_RS07905	0.85	-0.6
139,760	+		HMPREF1078_RS07905	0.90	-0.6
139,766	+				-1.3
139,772	+				+0.7
139,816	+				-0.5
140,482	+		HMPREF1078_RS07910	0.23	+1.8
140,497	+		HMPREF1078_RS07910	0.23	-0.8