Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_017675

Experiment: Dimethylsulfoniopropionate sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethylsulfoniopropionate sulfur source
3,860,262	+		TX73_017670	0.33	-0.0
3,860,284	+		TX73_017670	0.36	+0.9
3,860,317	+		TX73_017670	0.40	-0.6
3,860,351	+		TX73_017670	0.45	-0.4
3,860,351	+		TX73_017670	0.45	-0.1
3,860,425	-		TX73_017670	0.54	+0.9
3,860,434	-		TX73_017670	0.56	-0.6
3,860,460	+		TX73_017670	0.59	+0.1
3,860,491	+		TX73_017670	0.63	+0.6
3,860,495	+		TX73_017670	0.64	+0.6
3,860,511	+		TX73_017670	0.66	-0.2
3,860,528	+		TX73_017670	0.68	+0.4
3,860,528	+		TX73_017670	0.68	+0.0
3,860,536	-		TX73_017670	0.69	+0.3
3,860,536	-		TX73_017670	0.69	-0.3
3,860,566	+		TX73_017670	0.73	+0.8
3,860,585	+		TX73_017670	0.75	-0.2
3,860,588	-		TX73_017670	0.76	-0.3
3,860,595	+		TX73_017670	0.77	+0.5
3,860,600	+		TX73_017670	0.77	+0.4
3,860,616	-		TX73_017670	0.79	-0.4
3,860,618	+		TX73_017670	0.80	-0.8
3,860,626	-		TX73_017670	0.81	+0.1
3,860,626	-		TX73_017670	0.81	-0.2
3,860,636	+		TX73_017670	0.82	+0.7
3,860,663	+		TX73_017670	0.85	-0.7
3,860,663	+		TX73_017670	0.85	-0.5
3,860,663	+		TX73_017670	0.85	-0.2
3,860,678	+		TX73_017670	0.87	+0.2
3,860,678	+		TX73_017670	0.87	+0.3
3,860,681	-		TX73_017670	0.88	+0.0
3,860,681	-		TX73_017670	0.88	-0.1
3,860,686	-		TX73_017670	0.88	-0.5
3,860,686	-		TX73_017670	0.88	+0.6
3,860,692	-		TX73_017670	0.89	-0.1
3,860,693	+		TX73_017670	0.89	+0.2
3,860,704	+				-0.5
3,860,761	-				+0.7
3,860,770	+				+1.5
3,860,770	+				-0.7
3,860,770	+				-0.1
3,860,789	+				-0.2
3,860,806	-				+0.8
3,860,811	+				+0.4
3,860,818	+				+0.4
3,860,818	+				-0.4
3,860,818	-				-0.7
3,860,819	-				+0.7
3,860,864	+				+0.5
3,860,869	+				+0.1
3,860,872	-				+0.1
3,860,872	-				+0.4
3,860,881	+				+0.1
3,860,891	-				-0.5
3,860,891	-				+1.1
3,860,899	+				-0.9
3,860,904	+				-0.3
3,860,912	-				-0.2
3,860,915	+				+0.1
3,860,920	+				+0.4
3,860,920	+				-0.7
3,860,920	+				+0.1
3,860,923	-				-0.6
3,860,928	-				-1.2
3,860,928	-				-0.3
3,860,928	-				-0.3
3,860,928	-				+0.4
3,860,928	-				+0.6
3,860,928	-				+0.2
3,860,939	+				-0.6
3,860,946	+				-0.7
3,860,946	+				+0.2
3,860,946	+				-0.9
3,860,946	+				-0.4
3,860,946	+				-0.0
3,860,946	+				+0.2
3,860,946	+				+0.4
3,860,954	-				-0.7
3,860,954	-				+0.1
3,860,954	-				+0.2
3,860,954	-				-0.2
3,860,962	-				+2.2
3,860,971	-				-0.7
3,860,985	+				+0.9
3,860,997	+				+0.3
3,860,997	+				-0.3
3,861,005	-				+0.1
3,861,005	-				+0.5
3,861,005	-				+0.1
3,861,005	-				-0.1
3,861,005	-				+0.2
3,861,005	-				+0.2
3,861,005	-				-0.0
3,861,005	-				+0.1
3,861,005	-				+0.8
3,861,005	-				+0.4
3,861,007	+				-0.0
3,861,020	+				-0.3
3,861,020	+				+0.7
3,861,025	+				-0.7
3,861,028	-				+0.3
3,861,029	-				+0.3
3,861,029	-				-0.5
3,861,119	-				-0.3
3,861,122	-				+0.0
3,861,122	-				+0.0
3,861,138	+				-0.2
3,861,138	+				-0.4
3,861,142	+				+0.4
3,861,162	-				-0.4
3,861,163	+				+1.1
3,861,165	+				+0.1
3,861,166	+				+0.2
3,861,168	+				+0.1
3,861,173	+				+0.2
3,861,175	+				-0.1
3,861,176	+				-0.2
3,861,176	-				+0.5
3,861,184	+				+0.1
3,861,184	+				-0.0
3,861,200	+				-0.3
3,861,210	+				-0.0
3,861,210	+				-0.2
3,861,210	+				-0.3
3,861,210	+				+2.0
3,861,210	+				-1.1
3,861,210	+				-0.3
3,861,215	+				+0.7
3,861,215	+				-0.4
3,861,218	-				+0.4
3,861,218	-				-0.8
3,861,218	-				-2.1
3,861,218	-				-0.4
3,861,218	-				+0.2
3,861,218	-				+0.0
3,861,218	-				+0.6
3,861,220	+				+0.0
3,861,224	-				+0.1
3,861,246	+				-0.1
3,861,254	-				-0.4
3,861,297	+				+0.7
3,861,308	+				+0.1
3,861,312	+				+0.5
3,861,349	-		TX73_017675	0.16	-0.0
3,861,375	-		TX73_017675	0.20	+0.0
3,861,388	+		TX73_017675	0.22	-1.0
3,861,396	-		TX73_017675	0.24	+0.7
3,861,407	+		TX73_017675	0.26	+0.4
3,861,412	-		TX73_017675	0.27	+0.8
3,861,421	+		TX73_017675	0.28	+0.0
3,861,426	+		TX73_017675	0.29	+1.7
3,861,434	-		TX73_017675	0.31	-2.5
3,861,443	+		TX73_017675	0.32	-0.2
3,861,445	+		TX73_017675	0.32	-0.1
3,861,450	+		TX73_017675	0.33	+0.4
3,861,450	+		TX73_017675	0.33	-0.3
3,861,451	-		TX73_017675	0.34	+0.4
3,861,457	+		TX73_017675	0.35	+1.1
3,861,457	+		TX73_017675	0.35	-0.4
3,861,457	+		TX73_017675	0.35	-1.7
3,861,457	+		TX73_017675	0.35	+0.5
3,861,457	+		TX73_017675	0.35	-0.1
3,861,463	-		TX73_017675	0.36	+0.5
3,861,465	-		TX73_017675	0.36	+0.2
3,861,465	-		TX73_017675	0.36	-0.8
3,861,472	-		TX73_017675	0.37	-0.7
3,861,489	+		TX73_017675	0.40	-0.3
3,861,489	+		TX73_017675	0.40	+1.2
3,861,507	-		TX73_017675	0.43	+0.5
3,861,518	+		TX73_017675	0.45	+0.3
3,861,526	-		TX73_017675	0.47	-0.1
3,861,526	-		TX73_017675	0.47	+0.0
3,861,526	-		TX73_017675	0.47	-0.3
3,861,536	+		TX73_017675	0.48	-0.4
3,861,539	-		TX73_017675	0.49	-0.4
3,861,543	+		TX73_017675	0.50	+0.7
3,861,597	+		TX73_017675	0.59	-1.8
3,861,597	+		TX73_017675	0.59	+0.2
3,861,605	-		TX73_017675	0.61	-0.1
3,861,605	-		TX73_017675	0.61	-1.6
3,861,605	-		TX73_017675	0.61	+0.4
3,861,605	-		TX73_017675	0.61	-0.2
3,861,612	-		TX73_017675	0.62	-0.6
3,861,621	-		TX73_017675	0.63	-0.1
3,861,641	+		TX73_017675	0.67	-1.7
3,861,641	+		TX73_017675	0.67	+0.6
3,861,643	+		TX73_017675	0.67	+0.8
3,861,643	+		TX73_017675	0.67	-0.8
3,861,651	-		TX73_017675	0.69	+1.4
3,861,659	-		TX73_017675	0.70	-0.3
3,861,664	+		TX73_017675	0.71	-0.2
3,861,667	-		TX73_017675	0.71	+0.0
3,861,667	-		TX73_017675	0.71	+0.3
3,861,668	+		TX73_017675	0.72	+0.2
3,861,668	+		TX73_017675	0.72	-0.6
3,861,678	+		TX73_017675	0.73	-1.3
3,861,692	+		TX73_017675	0.76	+1.2
3,861,702	+		TX73_017675	0.78	+0.8
3,861,722	-		TX73_017675	0.81	-0.3
3,861,740	-		TX73_017675	0.84	-1.0
3,861,747	+		TX73_017675	0.85	+0.8
3,861,788	+				+0.0
3,861,791	-				-0.5
3,861,829	+				-0.7
3,861,832	-				+0.2
3,861,846	+				-0.7
3,861,846	+				-0.3
3,861,859	-				-0.0
3,861,910	-		TX73_017680	0.15	-0.4
3,861,910	-		TX73_017680	0.15	-0.1
3,861,911	-		TX73_017680	0.15	-0.2
3,861,933	-		TX73_017680	0.18	+0.4
3,861,967	+		TX73_017680	0.22	+1.3
3,861,979	-		TX73_017680	0.24	+0.0
3,861,996	-		TX73_017680	0.26	-0.4
3,862,019	+		TX73_017680	0.29	-0.8
3,862,031	+		TX73_017680	0.30	-0.5
3,862,053	+		TX73_017680	0.33	-0.4
3,862,091	-		TX73_017680	0.38	+0.1
3,862,133	-		TX73_017680	0.44	+0.1
3,862,135	-		TX73_017680	0.44	-0.3
3,862,142	+		TX73_017680	0.45	+0.3
3,862,144	+		TX73_017680	0.45	-0.5
3,862,159	-		TX73_017680	0.47	-0.2
3,862,188	-		TX73_017680	0.51	-0.4
3,862,202	+		TX73_017680	0.53	-0.1
3,862,205	-		TX73_017680	0.53	-1.5
3,862,205	-		TX73_017680	0.53	+0.8
3,862,207	+		TX73_017680	0.53	-0.5
3,862,212	+		TX73_017680	0.54	+0.3
3,862,230	-		TX73_017680	0.56	+0.3
3,862,230	-		TX73_017680	0.56	+0.9
3,862,230	-		TX73_017680	0.56	+0.6
3,862,243	-		TX73_017680	0.58	-0.6
3,862,245	-		TX73_017680	0.58	+0.3
3,862,259	+		TX73_017680	0.60	-0.7
3,862,267	-		TX73_017680	0.61	+0.2
3,862,292	-		TX73_017680	0.64	+0.9
3,862,315	+		TX73_017680	0.67	+0.3
3,862,342	-		TX73_017680	0.71	+0.1
3,862,357	-		TX73_017680	0.73	-0.3
3,862,373	+		TX73_017680	0.75	-1.0
3,862,381	-		TX73_017680	0.76	-0.4
3,862,386	-		TX73_017680	0.77	-0.3
3,862,392	+		TX73_017680	0.78	+0.0
3,862,400	-		TX73_017680	0.79	-1.1
3,862,402	-		TX73_017680	0.79	-0.2
3,862,404	-		TX73_017680	0.79	+0.1
3,862,440	+		TX73_017680	0.84	+0.7
3,862,451	+		TX73_017680	0.85	+0.9
3,862,451	+		TX73_017680	0.85	-0.1
3,862,455	+		TX73_017680	0.86	-0.2
3,862,458	-		TX73_017680	0.86	-0.1
3,862,459	-		TX73_017680	0.86	+1.1
3,862,459	-		TX73_017680	0.86	+0.8
3,862,459	-		TX73_017680	0.86	+0.0
3,862,463	-		TX73_017680	0.87	-1.0
3,862,486	-		TX73_017680	0.90	-0.3
3,862,496	-				+0.5
3,862,501	-				-2.0
3,862,552	+				-0.3
3,862,555	+				-0.2
3,862,583	+				+1.1
3,862,588	+				+0.2
3,862,596	-				-0.3
3,862,598	-				+0.3
3,862,624	-				+0.4
3,862,662	-				+0.3
3,862,662	-				-2.4
3,862,662	-				-0.2
3,862,687	+				+0.5
3,862,687	+				+0.2
3,862,687	+				+0.0
3,862,695	-				+0.4
3,862,697	-				-2.1
3,862,718	-				+0.3
3,862,739	+				-0.7
3,862,739	+				-0.5
3,862,752	-				-0.2
3,862,763	-				-1.5
3,862,767	+				-0.5
3,862,767	+				+0.4
3,862,773	-				+0.7
3,862,775	-				+0.1
3,862,775	-				-0.8
3,862,777	+				+0.4
3,862,777	+				-0.0
3,862,785	-				-0.7
3,862,785	-				-0.4
3,862,786	-				+2.0
3,862,800	+				+0.2
3,862,806	-				-0.1
3,862,806	-				-0.6
3,862,806	-				-0.3
3,862,806	-				-0.2
3,862,806	-				-1.1
3,862,807	-				+0.3