Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_021705

Experiment: Dimethyl sulfide sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl sulfide sulfur source
4,729,307	-				+0.2
4,729,307	-				-1.0
4,729,307	-				-0.3
4,729,313	+				-0.1
4,729,318	+				+0.4
4,729,331	-				-0.5
4,729,342	-				-0.1
4,729,346	-				+0.1
4,729,356	+				+0.3
4,729,356	+				-0.3
4,729,356	+				+0.2
4,729,366	-				-0.3
4,729,368	+				-0.9
4,729,420	-				-0.2
4,729,429	+				+0.4
4,729,429	+				-0.1
4,729,429	+				-0.1
4,729,429	+				+0.2
4,729,429	+				-0.0
4,729,437	-				+0.0
4,729,437	-				+0.6
4,729,437	-				-0.3
4,729,437	-				-0.4
4,729,447	-				-0.2
4,729,451	+				-0.6
4,729,454	-				-0.1
4,729,471	+				+0.2
4,729,471	+				+0.0
4,729,471	+				+1.8
4,729,471	+				-0.4
4,729,471	+				+0.6
4,729,471	+				+0.7
4,729,471	+				-0.2
4,729,471	+				-0.8
4,729,471	+				+1.1
4,729,471	+				-0.2
4,729,471	+				+0.0
4,729,471	+				+0.3
4,729,471	+				+0.0
4,729,471	+				-0.8
4,729,471	+				+0.3
4,729,471	+				+0.8
4,729,471	+				-0.1
4,729,479	-				-1.3
4,729,479	-				-0.7
4,729,479	-				-0.1
4,729,479	-				+0.5
4,729,479	-				+0.3
4,729,479	-				-0.0
4,729,479	-				-0.2
4,729,479	-				-0.1
4,729,479	-				+0.3
4,729,479	-				-1.1
4,729,479	-				-0.1
4,729,479	-				+0.2
4,729,479	-				-0.3
4,729,479	-				-0.2
4,729,479	-				+1.0
4,729,479	-				-0.3
4,729,479	-				+0.0
4,729,479	-				+0.2
4,729,479	-				-0.0
4,729,498	+				+0.5
4,729,498	+				-0.2
4,729,498	+				+0.6
4,729,498	+				+0.8
4,729,498	+				+0.3
4,729,498	+				-0.7
4,729,506	-				-0.0
4,729,506	-				-0.1
4,729,506	-				-1.1
4,729,506	-				+0.6
4,729,506	-				-0.2
4,729,512	-				-0.4
4,729,530	+				+0.8
4,729,559	-				-0.7
4,729,561	-				-0.6
4,729,595	+				-0.0
4,729,601	-				+0.0
4,729,603	-				-0.2
4,729,615	+				-0.4
4,729,622	+				+0.1
4,729,629	-				-0.2
4,729,635	+		TX73_021700	0.11	-0.8
4,729,672	-		TX73_021700	0.16	-1.2
4,729,675	+		TX73_021700	0.17	-0.8
4,729,683	-		TX73_021700	0.18	-0.1
4,729,698	-		TX73_021700	0.20	+0.9
4,729,700	-		TX73_021700	0.21	-1.1
4,729,700	-		TX73_021700	0.21	-0.3
4,729,705	+		TX73_021700	0.22	+0.7
4,729,710	+		TX73_021700	0.22	-0.2
4,729,710	+		TX73_021700	0.22	-0.1
4,729,710	+		TX73_021700	0.22	-1.4
4,729,713	-		TX73_021700	0.23	+0.8
4,729,713	-		TX73_021700	0.23	-0.8
4,729,718	-		TX73_021700	0.24	+0.1
4,729,745	-		TX73_021700	0.28	-0.2
4,729,754	+		TX73_021700	0.29	+0.7
4,729,754	+		TX73_021700	0.29	-0.8
4,729,759	+		TX73_021700	0.30	-0.7
4,729,762	+		TX73_021700	0.31	-0.2
4,729,762	-		TX73_021700	0.31	-1.2
4,729,762	-		TX73_021700	0.31	-0.2
4,729,764	+		TX73_021700	0.31	+0.2
4,729,769	+		TX73_021700	0.32	+0.1
4,729,788	+		TX73_021700	0.35	+0.2
4,729,789	-		TX73_021700	0.35	+0.4
4,729,822	+		TX73_021700	0.40	+1.0
4,729,889	+		TX73_021700	0.50	-0.1
4,729,897	-		TX73_021700	0.52	+0.7
4,729,916	-		TX73_021700	0.55	-0.6
4,729,918	+		TX73_021700	0.55	-0.3
4,729,918	+		TX73_021700	0.55	+0.2
4,729,919	+		TX73_021700	0.55	-0.2
4,729,924	+		TX73_021700	0.56	-1.5
4,729,926	-		TX73_021700	0.56	-0.3
4,729,926	-		TX73_021700	0.56	+0.1
4,729,927	-		TX73_021700	0.56	-0.5
4,729,948	-		TX73_021700	0.60	-1.1
4,729,948	-		TX73_021700	0.60	-0.5
4,729,973	-		TX73_021700	0.64	-0.9
4,729,984	+		TX73_021700	0.65	-1.1
4,729,990	+		TX73_021700	0.66	+0.2
4,729,999	-		TX73_021700	0.68	-1.1
4,730,050	-		TX73_021700	0.76	-0.6
4,730,059	+		TX73_021700	0.77	+0.2
4,730,067	-		TX73_021700	0.78	+0.7
4,730,067	-		TX73_021700	0.78	-0.5
4,730,090	-		TX73_021700	0.82	-0.2
4,730,112	-		TX73_021700	0.86	+0.4
4,730,126	-		TX73_021700	0.88	-0.5
4,730,163	+				+0.0
4,730,174	+				+1.0
4,730,182	-				+0.5
4,730,274	+				+0.5
4,730,282	-				+0.5
4,730,282	-				+0.3
4,730,282	-				-0.2
4,730,282	-				-0.3
4,730,302	-				-1.2
4,730,303	-				+0.1
4,730,316	-				+0.9
4,730,330	+				+0.9
4,730,330	+				+0.5
4,730,330	+				-0.2
4,730,335	+				+1.2
4,730,338	-				-0.7
4,730,338	-				+1.0
4,730,350	+				-0.2
4,730,358	-				+0.2
4,730,358	-				+0.0
4,730,370	-				-0.4
4,730,383	-				+2.0
4,730,386	+				-1.3
4,730,418	+				-3.0
4,730,426	-				+1.0
4,730,455	+		TX73_021705	0.10	+0.2
4,730,458	-		TX73_021705	0.11	-2.8
4,730,466	-		TX73_021705	0.11	-0.5
4,730,477	-		TX73_021705	0.12	+0.6
4,730,530	-		TX73_021705	0.16	-1.0
4,730,619	+		TX73_021705	0.22	-1.2
4,730,627	-		TX73_021705	0.22	-0.8
4,730,646	-		TX73_021705	0.23	-1.2
4,730,667	-		TX73_021705	0.25	+1.2
4,730,764	+		TX73_021705	0.31	+1.0
4,730,769	+		TX73_021705	0.32	-0.8
4,730,782	-		TX73_021705	0.32	+1.0
4,730,784	-		TX73_021705	0.33	+0.6
4,730,784	-		TX73_021705	0.33	+0.8
4,730,850	-		TX73_021705	0.37	+0.2
4,730,872	-		TX73_021705	0.39	+0.5
4,730,879	+		TX73_021705	0.39	+0.3
4,730,889	+		TX73_021705	0.40	+0.5
4,730,904	-		TX73_021705	0.41	+0.0
4,730,904	-		TX73_021705	0.41	+0.5
4,730,956	-		TX73_021705	0.44	+0.9
4,730,962	+		TX73_021705	0.45	+0.2
4,731,036	+		TX73_021705	0.50	+1.0
4,731,063	+		TX73_021705	0.51	-2.8
4,731,067	+		TX73_021705	0.52	-0.1
4,731,071	-		TX73_021705	0.52	+0.4
4,731,071	-		TX73_021705	0.52	-0.2
4,731,082	+		TX73_021705	0.53	+1.2
4,731,090	-		TX73_021705	0.53	-0.3
4,731,090	-		TX73_021705	0.53	+0.7
4,731,104	-		TX73_021705	0.54	-0.3
4,731,124	+		TX73_021705	0.55	+0.0
4,731,131	-		TX73_021705	0.56	+0.7
4,731,152	-		TX73_021705	0.57	+0.2
4,731,155	+		TX73_021705	0.58	-1.1
4,731,185	-		TX73_021705	0.60	-0.9
4,731,185	-		TX73_021705	0.60	+0.0
4,731,310	+		TX73_021705	0.68	-0.3
4,731,408	+		TX73_021705	0.75	+0.6
4,731,418	+		TX73_021705	0.75	-1.0
4,731,426	-		TX73_021705	0.76	+0.2
4,731,440	+		TX73_021705	0.77	+1.9
4,731,554	+		TX73_021705	0.84	+1.5
4,731,605	-		TX73_021705	0.88	+1.5
4,731,686	+				-2.0
4,731,732	-				+0.6
4,731,755	-				-0.1
4,731,783	+				-0.2
4,731,793	+				+0.0
4,731,796	-				+0.2
4,731,820	+				-0.5
4,731,823	+				+0.0
4,731,823	+				-0.1
4,731,831	-				+0.7
4,731,835	-				+0.2
4,731,850	+				-0.3
4,731,850	+				+1.3
4,731,858	-				+0.0
4,731,927	+				+0.2
4,731,938	+				-0.3
4,731,939	+				-1.0
4,731,959	+				-0.2
4,731,960	-				-0.6
4,731,991	-				+0.4
4,732,002	+				+0.2
4,732,005	-				-0.3
4,732,006	+				-0.7
4,732,009	+				-2.2
4,732,019	-				-0.3
4,732,019	-				+0.4
4,732,027	-				-0.9
4,732,049	-				-0.2
4,732,054	-				+0.5
4,732,083	-				+0.0
4,732,125	+				+0.6
4,732,125	+				+0.6
4,732,126	+				-0.1
4,732,126	+				-0.2
4,732,126	+				-0.1
4,732,128	+				-0.3
4,732,133	-				-0.3
4,732,134	-				-0.2
4,732,134	-				+0.1
4,732,134	-				-0.3
4,732,134	-				-0.4
4,732,149	+				+1.1
4,732,151	+				-0.5
4,732,173	-				-0.5
4,732,198	+				+0.2
4,732,204	-				+0.9
4,732,204	-				-0.6
4,732,206	-				-0.4
4,732,206	-				-0.9
4,732,218	+				-0.9
4,732,278	+				+0.2
4,732,297	-				-0.0
4,732,324	+				-0.2
4,732,324	-				-0.7
4,732,332	-				+0.9
4,732,339	-				+0.3
4,732,359	-		TX73_021710	0.10	+0.1
4,732,359	-		TX73_021710	0.10	+0.0
4,732,359	-		TX73_021710	0.10	+0.7
4,732,368	+		TX73_021710	0.11	-0.1
4,732,368	+		TX73_021710	0.11	+0.1
4,732,368	+		TX73_021710	0.11	+0.1
4,732,368	+		TX73_021710	0.11	-0.9
4,732,368	+		TX73_021710	0.11	-0.2
4,732,376	-		TX73_021710	0.11	+0.2
4,732,376	-		TX73_021710	0.11	-1.4
4,732,376	-		TX73_021710	0.11	+0.2
4,732,387	+		TX73_021710	0.12	+0.8
4,732,422	+		TX73_021710	0.13	+0.7
4,732,422	+		TX73_021710	0.13	-0.2
4,732,422	+		TX73_021710	0.13	+0.1
4,732,430	-		TX73_021710	0.14	+0.3
4,732,430	-		TX73_021710	0.14	+0.0
4,732,430	-		TX73_021710	0.14	-0.4
4,732,430	-		TX73_021710	0.14	-0.8
4,732,440	-		TX73_021710	0.14	-0.2
4,732,443	-		TX73_021710	0.14	-0.0
4,732,452	-		TX73_021710	0.15	+1.6
4,732,514	+		TX73_021710	0.17	-0.4
4,732,540	+		TX73_021710	0.19	-0.2
4,732,603	+		TX73_021710	0.21	+0.2
4,732,626	-		TX73_021710	0.23	-0.2
4,732,648	+		TX73_021710	0.24	+0.1
4,732,668	-		TX73_021710	0.24	-0.4
4,732,682	+		TX73_021710	0.25	-0.2
4,732,684	+		TX73_021710	0.25	+0.0
4,732,690	+		TX73_021710	0.25	-1.0
4,732,716	-		TX73_021710	0.27	-0.9
4,732,717	+		TX73_021710	0.27	+0.4
4,732,718	+		TX73_021710	0.27	+1.3
4,732,726	-		TX73_021710	0.27	-0.7
4,732,750	+		TX73_021710	0.28	+0.1
4,732,750	+		TX73_021710	0.28	+0.5
4,732,750	+		TX73_021710	0.28	-0.5
4,732,750	+		TX73_021710	0.28	-1.6
4,732,750	+		TX73_021710	0.28	-0.1
4,732,750	+		TX73_021710	0.28	-0.3
4,732,750	+		TX73_021710	0.28	-1.5
4,732,750	+		TX73_021710	0.28	-0.0
4,732,750	+		TX73_021710	0.28	+0.3
4,732,750	+		TX73_021710	0.28	-0.1
4,732,750	+		TX73_021710	0.28	-0.3
4,732,750	+		TX73_021710	0.28	+0.5
4,732,758	-		TX73_021710	0.29	-0.6
4,732,758	-		TX73_021710	0.29	-0.2
4,732,758	-		TX73_021710	0.29	-0.5
4,732,758	-		TX73_021710	0.29	+0.3
4,732,758	-		TX73_021710	0.29	+0.3
4,732,758	-		TX73_021710	0.29	-0.3
4,732,758	-		TX73_021710	0.29	+0.3
4,732,758	-		TX73_021710	0.29	-0.1
4,732,758	-		TX73_021710	0.29	+0.2
4,732,760	-		TX73_021710	0.29	+0.1
4,732,764	-		TX73_021710	0.29	-0.8
4,732,771	+		TX73_021710	0.29	+0.3
4,732,771	+		TX73_021710	0.29	+0.3
4,732,779	-		TX73_021710	0.30	+0.2
4,732,779	-		TX73_021710	0.30	+0.2