Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_016330

Experiment: Thiamine HCl sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Thiamine HCl sulfur source
3,565,543	-		TX73_016320	0.64	-1.1
3,565,548	-		TX73_016320	0.65	-0.8
3,565,576	-		TX73_016320	0.68	+0.9
3,565,618	+		TX73_016320	0.72	+0.5
3,565,625	+		TX73_016320	0.72	+0.9
3,565,630	+		TX73_016320	0.73	+1.1
3,565,648	-		TX73_016320	0.74	+0.9
3,565,659	+		TX73_016320	0.76	+0.2
3,565,671	+		TX73_016320	0.77	+1.2
3,565,679	-		TX73_016320	0.77	-0.9
3,565,713	+		TX73_016320	0.81	-0.8
3,565,766	+		TX73_016320	0.86	+0.4
3,565,796	+		TX73_016320	0.89	-0.8
3,565,798	+		TX73_016320	0.89	+0.2
3,565,814	-				+0.4
3,565,846	-				-1.3
3,565,865	-				+0.4
3,565,927	-				+0.7
3,565,929	-				-0.5
3,565,971	+				+0.2
3,566,003	-				-0.1
3,566,009	+				+0.1
3,566,017	-				-0.0
3,566,022	-				+0.2
3,566,026	+				+0.4
3,566,028	-				+0.1
3,566,034	-				-0.2
3,566,055	+				+0.9
3,566,056	+				-0.4
3,566,056	-				+0.0
3,566,056	-				+0.2
3,566,089	+				-0.1
3,566,097	-				-0.2
3,566,101	-				-0.3
3,566,120	-		TX73_016325	0.15	-0.9
3,566,157	+		TX73_016325	0.34	-0.4
3,566,179	+		TX73_016325	0.46	+0.1
3,566,184	+		TX73_016325	0.48	+0.6
3,566,285	+				+0.1
3,566,301	+				+0.0
3,566,309	-				-0.3
3,566,319	-				-0.4
3,566,323	+				-1.1
3,566,345	+				-1.2
3,566,348	-				-0.3
3,566,352	-				+0.6
3,566,352	-				-0.1
3,566,359	+				-0.9
3,566,359	+				-0.0
3,566,359	+				+0.0
3,566,359	+				+1.1
3,566,359	+				+0.3
3,566,359	+				+0.0
3,566,367	-				-0.1
3,566,367	-				+0.8
3,566,367	-				+0.6
3,566,367	-				-0.3
3,566,367	-				+0.0
3,566,367	-				+0.3
3,566,367	-				+0.9
3,566,367	-				-0.3
3,566,367	-				+1.1
3,566,367	-				+0.4
3,566,367	-				-1.6
3,566,367	-				-0.8
3,566,367	-				-0.2
3,566,367	-				+0.3
3,566,376	+				-0.1
3,566,381	+				-0.5
3,566,381	+				+0.3
3,566,389	-				+0.2
3,566,389	-				+0.5
3,566,389	-				-0.4
3,566,399	-				+0.7
3,566,466	-				-1.2
3,566,520	+				-0.2
3,566,520	+				-1.1
3,566,526	+				-0.0
3,566,526	+				+0.0
3,566,579	-		TX73_016330	0.13	+0.3
3,566,581	+		TX73_016330	0.13	-0.2
3,566,581	+		TX73_016330	0.13	-0.9
3,566,586	+		TX73_016330	0.14	-0.5
3,566,586	+		TX73_016330	0.14	-0.6
3,566,586	+		TX73_016330	0.14	-0.1
3,566,586	+		TX73_016330	0.14	-1.0
3,566,586	+		TX73_016330	0.14	-3.5
3,566,586	+		TX73_016330	0.14	+0.1
3,566,589	-		TX73_016330	0.14	-0.4
3,566,594	-		TX73_016330	0.15	+0.0
3,566,605	+		TX73_016330	0.17	-0.7
3,566,605	+		TX73_016330	0.17	-0.3
3,566,609	+		TX73_016330	0.17	-0.9
3,566,613	-		TX73_016330	0.18	-0.3
3,566,613	-		TX73_016330	0.18	-0.2
3,566,613	-		TX73_016330	0.18	-0.1
3,566,613	-		TX73_016330	0.18	-0.9
3,566,639	+		TX73_016330	0.22	+0.2
3,566,644	-		TX73_016330	0.23	+0.4
3,566,647	-		TX73_016330	0.23	-0.6
3,566,667	+		TX73_016330	0.26	-0.9
3,566,686	+		TX73_016330	0.29	-0.1
3,566,686	+		TX73_016330	0.29	-1.4
3,566,692	+		TX73_016330	0.30	+0.3
3,566,699	-		TX73_016330	0.31	-1.0
3,566,713	+		TX73_016330	0.33	-0.1
3,566,721	-		TX73_016330	0.34	+0.3
3,566,732	+		TX73_016330	0.36	-1.1
3,566,741	-		TX73_016330	0.37	+0.2
3,566,766	+		TX73_016330	0.41	-0.6
3,566,774	-		TX73_016330	0.42	-0.6
3,566,774	-		TX73_016330	0.42	-0.2
3,566,776	+		TX73_016330	0.43	-0.2
3,566,822	-		TX73_016330	0.50	+1.9
3,566,892	+		TX73_016330	0.60	-2.3
3,566,892	+		TX73_016330	0.60	-0.5
3,566,897	+		TX73_016330	0.61	-0.5
3,566,897	+		TX73_016330	0.61	-1.3
3,566,897	+		TX73_016330	0.61	-0.5
3,566,900	-		TX73_016330	0.62	-1.0
3,566,900	-		TX73_016330	0.62	-0.7
3,566,900	-		TX73_016330	0.62	-0.5
3,566,900	-		TX73_016330	0.62	+0.1
3,566,905	-		TX73_016330	0.62	+0.1
3,566,905	-		TX73_016330	0.62	+0.0
3,566,915	+		TX73_016330	0.64	+1.0
3,566,935	-		TX73_016330	0.67	+0.4
3,566,977	+		TX73_016330	0.73	-0.4
3,566,979	+		TX73_016330	0.74	+0.6
3,567,006	-		TX73_016330	0.78	-1.1
3,567,033	+		TX73_016330	0.82	-0.2
3,567,035	+		TX73_016330	0.82	-0.4
3,567,043	-		TX73_016330	0.83	-0.3
3,567,044	-		TX73_016330	0.84	+0.5
3,567,047	+		TX73_016330	0.84	-0.4
3,567,054	-		TX73_016330	0.85	-0.5
3,567,090	+				-0.3
3,567,098	-				-0.8
3,567,146	+				+0.4
3,567,163	+				-0.0
3,567,165	+				-0.1
3,567,200	+				+0.5
3,567,239	-				+0.4
3,567,239	-				+0.1
3,567,239	-				-0.3
3,567,246	+				+0.1
3,567,261	+				-0.4
3,567,267	+				+0.6
3,567,275	-				+0.7
3,567,292	+				+0.2
3,567,325	-		TX73_016335	0.20	-0.6
3,567,338	+		TX73_016335	0.24	+0.2
3,567,343	+		TX73_016335	0.26	+1.3
3,567,343	+		TX73_016335	0.26	-0.9
3,567,343	+		TX73_016335	0.26	+0.3
3,567,346	-		TX73_016335	0.27	+0.6
3,567,353	+		TX73_016335	0.29	+0.3
3,567,356	-		TX73_016335	0.31	+0.2
3,567,384	+		TX73_016335	0.40	+0.7
3,567,386	+		TX73_016335	0.41	+0.5
3,567,386	+		TX73_016335	0.41	+0.4
3,567,454	+		TX73_016335	0.65	-1.8
3,567,460	+		TX73_016335	0.67	-0.6
3,567,519	+		TX73_016335	0.88	-1.4
3,567,521	+		TX73_016335	0.88	-0.7
3,567,521	+		TX73_016335	0.88	-0.0
3,567,521	+		TX73_016335	0.88	-0.7
3,567,531	-				-0.1
3,567,550	-				+0.5
3,567,555	-				+1.2
3,567,557	-				-1.0
3,567,605	+				-0.4
3,567,623	+				+0.3
3,567,657	+		TX73_016340	0.12	-0.0
3,567,738	-		TX73_016340	0.22	-1.5
3,567,761	-		TX73_016340	0.25	+0.4
3,567,877	+		TX73_016340	0.40	+0.4
3,567,897	+		TX73_016340	0.42	-0.3
3,567,908	+		TX73_016340	0.44	+0.4
3,567,952	+		TX73_016340	0.49	+0.6
3,567,974	+		TX73_016340	0.52	+0.1
3,567,984	+		TX73_016340	0.53	-0.9
3,567,999	-		TX73_016340	0.55	-0.9
3,567,999	-		TX73_016340	0.55	+1.8
3,567,999	-		TX73_016340	0.55	+0.2
3,568,078	+		TX73_016340	0.65	-0.3
3,568,078	+		TX73_016340	0.65	+0.4
3,568,078	+		TX73_016340	0.65	+0.5
3,568,084	-		TX73_016340	0.66	-0.0
3,568,084	-		TX73_016340	0.66	+0.5
3,568,084	-		TX73_016340	0.66	-0.0
3,568,086	-		TX73_016340	0.66	-1.7
3,568,087	+		TX73_016340	0.66	+0.3
3,568,132	+		TX73_016340	0.72	-0.4
3,568,133	-		TX73_016340	0.72	-0.2
3,568,134	-		TX73_016340	0.72	+0.2