Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_021005

Experiment: sodium isethionate sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium isethionate sulfur source
4,584,892	+				-2.5
4,584,892	+				-1.1
4,584,892	+				-0.7
4,584,892	+				-0.2
4,584,900	-				-0.3
4,584,900	-				-2.8
4,584,900	-				-0.3
4,584,900	-				-1.7
4,584,910	+		TX73_021000	0.11	+0.5
4,584,937	-		TX73_021000	0.13	-0.7
4,584,956	+		TX73_021000	0.15	-1.7
4,584,966	+		TX73_021000	0.16	-0.6
4,584,969	-		TX73_021000	0.16	-2.3
4,584,971	-		TX73_021000	0.16	-0.2
4,585,002	+		TX73_021000	0.19	-0.1
4,585,025	-		TX73_021000	0.21	-0.2
4,585,033	+		TX73_021000	0.22	+0.1
4,585,033	+		TX73_021000	0.22	+0.6
4,585,033	+		TX73_021000	0.22	-0.4
4,585,033	+		TX73_021000	0.22	-0.9
4,585,036	-		TX73_021000	0.22	+0.9
4,585,054	-		TX73_021000	0.24	-1.3
4,585,105	+		TX73_021000	0.29	-2.0
4,585,113	-		TX73_021000	0.30	+0.3
4,585,113	-		TX73_021000	0.30	+0.5
4,585,113	-		TX73_021000	0.30	-1.4
4,585,137	-		TX73_021000	0.32	-2.2
4,585,166	-		TX73_021000	0.34	-0.5
4,585,199	+		TX73_021000	0.38	+0.4
4,585,201	+		TX73_021000	0.38	-1.5
4,585,204	-		TX73_021000	0.38	-1.0
4,585,209	+		TX73_021000	0.38	-0.0
4,585,224	+		TX73_021000	0.40	-0.8
4,585,254	+		TX73_021000	0.43	-0.7
4,585,266	+		TX73_021000	0.44	-0.7
4,585,266	-		TX73_021000	0.44	-0.1
4,585,274	-		TX73_021000	0.44	-1.3
4,585,274	-		TX73_021000	0.44	-0.2
4,585,274	-		TX73_021000	0.44	-0.9
4,585,291	+		TX73_021000	0.46	-1.0
4,585,294	-		TX73_021000	0.46	-1.2
4,585,300	-		TX73_021000	0.47	-1.4
4,585,336	+		TX73_021000	0.50	-0.9
4,585,341	+		TX73_021000	0.51	-1.3
4,585,341	+		TX73_021000	0.51	-1.6
4,585,341	+		TX73_021000	0.51	-0.9
4,585,350	-		TX73_021000	0.51	-0.6
4,585,414	+		TX73_021000	0.57	-0.7
4,585,438	-		TX73_021000	0.60	+0.7
4,585,451	-		TX73_021000	0.61	-2.4
4,585,535	+		TX73_021000	0.69	-0.9
4,585,540	+		TX73_021000	0.69	-0.0
4,585,541	+		TX73_021000	0.69	-0.6
4,585,578	-		TX73_021000	0.73	-0.5
4,585,587	-		TX73_021000	0.73	-1.3
4,585,588	-		TX73_021000	0.74	-0.0
4,585,599	+		TX73_021000	0.75	-0.7
4,585,600	+		TX73_021000	0.75	-0.6
4,585,608	-		TX73_021000	0.75	-3.3
4,585,639	-		TX73_021000	0.78	-0.5
4,585,639	-		TX73_021000	0.78	-1.6
4,585,665	+		TX73_021000	0.81	-0.7
4,585,694	-		TX73_021000	0.83	-2.2
4,585,699	-		TX73_021000	0.84	+0.5
4,585,788	+				-0.5
4,585,796	-				-0.4
4,585,796	-				-1.3
4,585,812	+				-0.6
4,585,816	-				-0.8
4,585,838	+				-1.8
4,585,839	-				-0.5
4,585,850	+				-1.1
4,585,855	+				-0.3
4,585,858	-				-0.0
4,585,858	-				-1.8
4,585,899	-				-0.1
4,585,940	+				+0.7
4,585,963	-				-1.5
4,585,991	-				+0.0
4,586,003	-				+0.4
4,586,010	+				+0.5
4,586,010	+				+0.2
4,586,049	-		TX73_021005	0.10	-0.1
4,586,067	-		TX73_021005	0.11	+0.0
4,586,077	-		TX73_021005	0.12	+0.2
4,586,080	+		TX73_021005	0.12	-0.1
4,586,080	+		TX73_021005	0.12	+0.0
4,586,086	-		TX73_021005	0.12	+0.3
4,586,098	-		TX73_021005	0.13	+0.7
4,586,129	+		TX73_021005	0.15	-0.5
4,586,151	-		TX73_021005	0.16	+0.8
4,586,151	-		TX73_021005	0.16	+0.0
4,586,165	+		TX73_021005	0.17	-0.9
4,586,165	+		TX73_021005	0.17	-0.5
4,586,173	-		TX73_021005	0.17	-0.7
4,586,184	+		TX73_021005	0.18	+0.6
4,586,184	-		TX73_021005	0.18	-0.0
4,586,189	+		TX73_021005	0.18	+0.1
4,586,199	-		TX73_021005	0.18	+1.5
4,586,237	+		TX73_021005	0.21	+0.0
4,586,285	+		TX73_021005	0.23	+0.4
4,586,339	-		TX73_021005	0.26	-0.9
4,586,340	-		TX73_021005	0.26	+0.0
4,586,354	-		TX73_021005	0.27	-0.1
4,586,356	+		TX73_021005	0.27	+0.2
4,586,364	+		TX73_021005	0.28	+0.5
4,586,376	-		TX73_021005	0.28	-0.2
4,586,389	+		TX73_021005	0.29	-0.1
4,586,389	+		TX73_021005	0.29	+1.5
4,586,394	+		TX73_021005	0.29	+0.6
4,586,397	-		TX73_021005	0.29	+1.2
4,586,413	+		TX73_021005	0.30	+0.0
4,586,428	+		TX73_021005	0.31	-0.2
4,586,431	+		TX73_021005	0.31	-0.2
4,586,532	+		TX73_021005	0.37	+0.2
4,586,532	+		TX73_021005	0.37	-0.2
4,586,549	+		TX73_021005	0.38	+0.0
4,586,556	-		TX73_021005	0.38	+0.1
4,586,561	+		TX73_021005	0.38	-0.4
4,586,595	-		TX73_021005	0.40	+0.2
4,586,603	-		TX73_021005	0.41	+0.7
4,586,610	-		TX73_021005	0.41	+0.1
4,586,653	+		TX73_021005	0.44	-0.0
4,586,654	+		TX73_021005	0.44	+0.6
4,586,661	-		TX73_021005	0.44	+0.0
4,586,661	-		TX73_021005	0.44	-0.4
4,586,699	-		TX73_021005	0.46	+0.3
4,586,715	-		TX73_021005	0.47	-0.9
4,586,722	-		TX73_021005	0.47	+0.0
4,586,723	-		TX73_021005	0.47	-0.3
4,586,723	-		TX73_021005	0.47	+0.6
4,586,725	-		TX73_021005	0.48	+0.2
4,586,779	+		TX73_021005	0.51	+0.2
4,586,791	+		TX73_021005	0.51	-0.0
4,586,793	+		TX73_021005	0.51	-0.2
4,586,794	-		TX73_021005	0.51	-0.2
4,586,794	-		TX73_021005	0.51	+1.3
4,586,806	+		TX73_021005	0.52	+0.1
4,586,819	-		TX73_021005	0.53	-0.6
4,586,836	-		TX73_021005	0.54	+0.4
4,586,837	+		TX73_021005	0.54	-0.2
4,586,842	+		TX73_021005	0.54	-1.2
4,586,847	+		TX73_021005	0.54	-0.4
4,586,850	-		TX73_021005	0.54	-1.3
4,586,851	+		TX73_021005	0.55	-0.5
4,586,855	-		TX73_021005	0.55	-1.2
4,586,859	-		TX73_021005	0.55	+0.0
4,586,859	-		TX73_021005	0.55	-0.2
4,586,871	+		TX73_021005	0.56	-0.1
4,586,890	-		TX73_021005	0.57	-0.1
4,586,896	+		TX73_021005	0.57	-0.3
4,586,904	-		TX73_021005	0.57	-0.1
4,586,905	+		TX73_021005	0.58	+0.0
4,586,905	+		TX73_021005	0.58	+0.3
4,586,913	-		TX73_021005	0.58	+0.2
4,586,930	+		TX73_021005	0.59	-0.3
4,586,931	+		TX73_021005	0.59	+0.3
4,586,931	+		TX73_021005	0.59	-0.8
4,586,931	+		TX73_021005	0.59	-0.8
4,586,931	+		TX73_021005	0.59	-1.3
4,586,936	+		TX73_021005	0.59	+0.6
4,586,939	-		TX73_021005	0.59	-0.2
4,586,939	-		TX73_021005	0.59	+0.2
4,586,942	+		TX73_021005	0.60	+0.5
4,586,957	-		TX73_021005	0.60	-0.3
4,586,978	+		TX73_021005	0.62	+0.4
4,586,986	-		TX73_021005	0.62	-0.2
4,587,004	-		TX73_021005	0.63	-1.1
4,587,004	-		TX73_021005	0.63	+0.4
4,587,004	-		TX73_021005	0.63	+0.7
4,587,004	-		TX73_021005	0.63	+0.8
4,587,010	+		TX73_021005	0.63	-0.1
4,587,010	+		TX73_021005	0.63	-0.1
4,587,026	+		TX73_021005	0.64	-0.4
4,587,034	+		TX73_021005	0.65	-0.3
4,587,034	-		TX73_021005	0.65	+0.3
4,587,044	+		TX73_021005	0.65	-1.8
4,587,044	+		TX73_021005	0.65	+0.6
4,587,050	+		TX73_021005	0.66	+0.8
4,587,088	+		TX73_021005	0.68	-0.5
4,587,096	-		TX73_021005	0.68	+0.5
4,587,096	-		TX73_021005	0.68	+1.7
4,587,097	-		TX73_021005	0.68	+0.7
4,587,117	-		TX73_021005	0.69	+0.3
4,587,117	-		TX73_021005	0.69	-0.1
4,587,117	-		TX73_021005	0.69	-0.1
4,587,132	+		TX73_021005	0.70	-1.5
4,587,140	-		TX73_021005	0.71	-0.1
4,587,154	+		TX73_021005	0.71	-0.1
4,587,161	+		TX73_021005	0.72	-0.2
4,587,187	-		TX73_021005	0.73	-0.2
4,587,227	+		TX73_021005	0.75	-0.3
4,587,334	-		TX73_021005	0.81	-0.2
4,587,334	-		TX73_021005	0.81	-0.8
4,587,344	-		TX73_021005	0.82	+0.6
4,587,453	+		TX73_021005	0.88	+0.2
4,587,458	+		TX73_021005	0.88	-0.1
4,587,466	-		TX73_021005	0.89	-0.1
4,587,466	-		TX73_021005	0.89	-0.6
4,587,480	+		TX73_021005	0.89	-0.0
4,587,485	+		TX73_021005	0.90	+0.3
4,587,486	+		TX73_021005	0.90	+0.2
4,587,491	+				-0.2
4,587,499	-				+0.1
4,587,501	-				+0.3
4,587,514	+				-0.4
4,587,523	-				-0.9
4,587,556	+				+0.9
4,587,556	+				-0.0
4,587,558	+				-0.2
4,587,581	+				-0.2
4,587,589	-				+0.5
4,587,589	-				-0.8
4,587,635	-				+0.0
4,587,675	+				+1.8
4,587,676	-				+0.7
4,587,680	+				-0.7
4,587,688	-				+1.1
4,587,690	+				+0.9
4,587,758	+		TX73_021010	0.19	+1.5
4,587,766	-		TX73_021010	0.21	+0.0
4,587,766	-		TX73_021010	0.21	+2.1
4,587,768	-		TX73_021010	0.21	+1.7
4,587,794	-		TX73_021010	0.27	+0.5
4,587,829	+		TX73_021010	0.35	+0.1
4,587,834	-		TX73_021010	0.36	-0.5
4,587,859	+		TX73_021010	0.41	+1.5
4,587,981	-		TX73_021010	0.68	+1.9
4,588,030	-		TX73_021010	0.79	+2.0
4,588,134	+				+0.3
4,588,143	+				+0.5
4,588,198	-				+0.8
4,588,198	-				-0.3
4,588,215	-		TX73_021015	0.11	-1.2
4,588,245	-		TX73_021015	0.14	-0.5
4,588,255	-		TX73_021015	0.15	-0.6
4,588,255	-		TX73_021015	0.15	+0.1
4,588,255	-		TX73_021015	0.15	-0.2
4,588,268	-		TX73_021015	0.16	-0.9
4,588,347	+		TX73_021015	0.25	-0.4
4,588,362	+		TX73_021015	0.27	-0.4
4,588,364	+		TX73_021015	0.27	+0.5
4,588,375	+		TX73_021015	0.28	-0.5
4,588,387	+		TX73_021015	0.29	-0.3
4,588,397	+		TX73_021015	0.30	-0.6
4,588,397	+		TX73_021015	0.30	-0.1
4,588,405	-		TX73_021015	0.31	+0.5
4,588,459	+		TX73_021015	0.37	-0.4
4,588,459	+		TX73_021015	0.37	-0.2
4,588,493	-		TX73_021015	0.41	+0.1
4,588,493	-		TX73_021015	0.41	-0.3
4,588,498	-		TX73_021015	0.41	+0.2
4,588,519	+		TX73_021015	0.43	-0.6
4,588,528	-		TX73_021015	0.44	-0.6
4,588,557	+		TX73_021015	0.48	-0.6
4,588,570	+		TX73_021015	0.49	+0.2
4,588,631	-		TX73_021015	0.56	+0.5
4,588,631	-		TX73_021015	0.56	+0.5
4,588,638	+		TX73_021015	0.56	+0.2
4,588,638	+		TX73_021015	0.56	-0.4
4,588,654	+		TX73_021015	0.58	+0.2
4,588,664	-		TX73_021015	0.59	-1.0