Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_012660

Experiment: sodium isethionate sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium isethionate sulfur source
2,775,601	+		TX73_012650	0.85	-1.7
2,775,601	+		TX73_012650	0.85	+0.5
2,775,601	+		TX73_012650	0.85	-1.7
2,775,609	-		TX73_012650	0.85	-0.6
2,775,638	+		TX73_012650	0.88	-1.9
2,775,648	+		TX73_012650	0.89	-1.2
2,775,715	+				-0.6
2,775,850	-				-0.9
2,775,910	+				+0.3
2,775,910	+				-0.0
2,775,913	-				-0.6
2,776,000	+				+0.8
2,776,033	-				+0.6
2,776,042	-		TX73_012655	0.11	-0.7
2,776,083	+		TX73_012655	0.19	+0.3
2,776,086	+		TX73_012655	0.20	+0.1
2,776,091	+		TX73_012655	0.21	-0.4
2,776,091	+		TX73_012655	0.21	+0.1
2,776,123	-		TX73_012655	0.27	-0.0
2,776,164	-		TX73_012655	0.35	-0.4
2,776,178	-		TX73_012655	0.38	-0.5
2,776,178	-		TX73_012655	0.38	+0.9
2,776,200	-		TX73_012655	0.42	+0.6
2,776,200	-		TX73_012655	0.42	-0.5
2,776,234	+		TX73_012655	0.48	+0.8
2,776,251	+		TX73_012655	0.52	+0.3
2,776,254	-		TX73_012655	0.52	+0.1
2,776,259	-		TX73_012655	0.53	-0.1
2,776,294	+		TX73_012655	0.60	-0.4
2,776,295	+		TX73_012655	0.60	-0.4
2,776,309	-		TX73_012655	0.63	-0.3
2,776,335	+		TX73_012655	0.68	-0.0
2,776,343	-		TX73_012655	0.70	-0.6
2,776,375	+		TX73_012655	0.76	-1.1
2,776,385	+		TX73_012655	0.78	-0.4
2,776,391	+		TX73_012655	0.79	-0.3
2,776,393	-		TX73_012655	0.79	+0.7
2,776,393	-		TX73_012655	0.79	-0.2
2,776,393	-		TX73_012655	0.79	-0.3
2,776,393	-		TX73_012655	0.79	-0.2
2,776,407	-		TX73_012655	0.82	-0.1
2,776,413	-		TX73_012655	0.83	-1.0
2,776,431	+		TX73_012655	0.87	+0.6
2,776,433	+		TX73_012655	0.87	-0.4
2,776,455	+				-0.7
2,776,455	+				+0.0
2,776,463	-				-0.1
2,776,463	-				-0.2
2,776,463	-				-0.5
2,776,494	-				+0.1
2,776,528	+				+0.3
2,776,532	-				+0.8
2,776,532	-				-0.5
2,776,536	+				-0.2
2,776,544	-				-0.4
2,776,546	+				-0.9
2,776,577	-				-0.2
2,776,580	-				-0.0
2,776,580	-				+0.3
2,776,611	-				-0.0
2,776,615	+				-0.2
2,776,631	+				-2.7
2,776,631	+				+0.4
2,776,631	-				+1.0
2,776,677	-				-0.0
2,776,758	-		TX73_012660	0.12	+0.9
2,776,758	-		TX73_012660	0.12	+0.2
2,776,783	+		TX73_012660	0.14	+0.1
2,776,783	+		TX73_012660	0.14	-0.0
2,776,831	-		TX73_012660	0.17	+0.5
2,776,833	-		TX73_012660	0.18	-0.1
2,776,840	+		TX73_012660	0.18	-0.3
2,776,840	+		TX73_012660	0.18	+1.2
2,776,840	+		TX73_012660	0.18	+1.1
2,776,840	+		TX73_012660	0.18	+0.2
2,776,848	-		TX73_012660	0.19	-0.2
2,776,848	-		TX73_012660	0.19	+0.5
2,776,848	-		TX73_012660	0.19	+0.6
2,776,885	+		TX73_012660	0.21	-0.3
2,776,914	+		TX73_012660	0.24	-0.0
2,776,926	-		TX73_012660	0.25	+0.7
2,776,928	-		TX73_012660	0.25	+1.1
2,776,956	+		TX73_012660	0.27	-0.7
2,776,956	+		TX73_012660	0.27	+0.4
2,776,964	-		TX73_012660	0.27	+0.8
2,776,993	+		TX73_012660	0.30	+0.3
2,777,026	-		TX73_012660	0.32	-0.3
2,777,028	-		TX73_012660	0.32	-0.3
2,777,039	+		TX73_012660	0.33	-1.0
2,777,051	+		TX73_012660	0.34	-1.0
2,777,051	+		TX73_012660	0.34	+0.3
2,777,051	+		TX73_012660	0.34	-0.5
2,777,059	-		TX73_012660	0.34	+1.5
2,777,059	-		TX73_012660	0.34	+1.2
2,777,078	+		TX73_012660	0.36	-1.1
2,777,091	-		TX73_012660	0.37	+0.6
2,777,114	+		TX73_012660	0.39	+0.3
2,777,114	+		TX73_012660	0.39	+0.9
2,777,119	+		TX73_012660	0.39	+0.3
2,777,119	+		TX73_012660	0.39	-0.2
2,777,122	-		TX73_012660	0.39	+0.1
2,777,122	-		TX73_012660	0.39	+0.4
2,777,154	+		TX73_012660	0.42	+0.2
2,777,154	+		TX73_012660	0.42	-0.8
2,777,162	-		TX73_012660	0.42	-0.7
2,777,195	+		TX73_012660	0.45	+1.2
2,777,197	+		TX73_012660	0.45	+1.3
2,777,203	-		TX73_012660	0.45	+0.0
2,777,203	-		TX73_012660	0.45	-1.3
2,777,203	-		TX73_012660	0.45	-1.1
2,777,205	-		TX73_012660	0.45	+0.4
2,777,205	-		TX73_012660	0.45	-0.5
2,777,312	-		TX73_012660	0.53	-0.6
2,777,317	+		TX73_012660	0.54	+0.4
2,777,317	+		TX73_012660	0.54	-0.0
2,777,317	+		TX73_012660	0.54	-0.6
2,777,317	+		TX73_012660	0.54	-0.7
2,777,317	+		TX73_012660	0.54	+1.5
2,777,325	-		TX73_012660	0.54	-0.2
2,777,325	-		TX73_012660	0.54	-0.8
2,777,325	-		TX73_012660	0.54	-0.2
2,777,325	-		TX73_012660	0.54	+0.9
2,777,361	-		TX73_012660	0.57	+0.2
2,777,415	-		TX73_012660	0.61	-0.2
2,777,488	+		TX73_012660	0.67	-1.3
2,777,504	-		TX73_012660	0.68	-1.5
2,777,560	+		TX73_012660	0.72	-1.0
2,777,578	-		TX73_012660	0.73	-0.9
2,777,592	-		TX73_012660	0.74	+0.9
2,777,847	-				-1.1
2,777,901	-				-0.0
2,777,909	-				-0.3
2,777,926	-				-0.0
2,777,962	-				-0.3
2,778,082	+				+0.3
2,778,090	-				+0.1
2,778,178	+		TX73_012665	0.12	-0.2
2,778,178	+		TX73_012665	0.12	+0.6
2,778,244	-		TX73_012665	0.18	-0.2
2,778,251	-		TX73_012665	0.18	+0.1
2,778,258	+		TX73_012665	0.19	+0.1
2,778,305	+		TX73_012665	0.23	+0.4
2,778,308	+		TX73_012665	0.23	+0.2
2,778,308	+		TX73_012665	0.23	-0.0
2,778,310	+		TX73_012665	0.23	+0.4
2,778,316	-		TX73_012665	0.24	+0.0
2,778,407	-		TX73_012665	0.32	-2.9
2,778,407	-		TX73_012665	0.32	-0.3
2,778,409	+		TX73_012665	0.32	-0.7
2,778,410	+		TX73_012665	0.32	-0.3
2,778,410	+		TX73_012665	0.32	-0.6
2,778,417	-		TX73_012665	0.33	-0.3
2,778,533	-		TX73_012665	0.43	-0.2
2,778,538	+		TX73_012665	0.43	-0.6
2,778,575	-		TX73_012665	0.46	-0.1
2,778,577	+		TX73_012665	0.46	-0.7
2,778,629	-		TX73_012665	0.51	-0.2
2,778,631	+		TX73_012665	0.51	-0.1
2,778,673	-		TX73_012665	0.55	+0.1
2,778,678	+		TX73_012665	0.55	-1.1
2,778,678	+		TX73_012665	0.55	+0.6
2,778,726	-		TX73_012665	0.59	+0.4
2,778,744	+		TX73_012665	0.61	+0.3
2,778,762	-		TX73_012665	0.62	+0.1
2,778,782	-		TX73_012665	0.64	+0.7
2,778,806	-		TX73_012665	0.66	-0.0
2,778,880	-		TX73_012665	0.72	+0.1
2,778,885	+		TX73_012665	0.73	-0.3
2,778,912	+		TX73_012665	0.75	+0.3
2,778,915	+		TX73_012665	0.75	-0.7
2,778,926	+		TX73_012665	0.76	-0.4