Experiment: sodium isethionate sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_023360 and TX73_023365 are separated by 394 nucleotides TX73_023365 and TX73_023370 are separated by 36 nucleotides TX73_023370 and TX73_023375 are separated by 133 nucleotides TX73_023375 and TX73_023380 are separated by 232 nucleotides TX73_023380 and TX73_023385 are separated by 178 nucleotides
TX73_023360: TX73_023360 - RusA family crossover junction endodeoxyribonuclease, at 5,079,114 to 5,079,527
_023360
TX73_023365: TX73_023365 - hypothetical protein, at 5,079,922 to 5,080,098
_023365
TX73_023370: TX73_023370 - alkylphosphonate utilization protein, at 5,080,135 to 5,080,353
_023370
TX73_023375: TX73_023375 - OmpW family protein, at 5,080,487 to 5,081,176
_023375
TX73_023380: TX73_023380 - hypothetical protein, at 5,081,409 to 5,081,669
_023380
TX73_023385: TX73_023385 - propionyl-CoA synthetase, at 5,081,848 to 5,083,758
_023385
Position (kb) 5080
5081
5082 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5079.522 kb on + strand at 5079.538 kb on + strand at 5079.540 kb on + strand at 5079.548 kb on - strand at 5079.578 kb on + strand at 5079.586 kb on - strand at 5079.619 kb on - strand at 5079.637 kb on + strand at 5079.745 kb on + strand at 5079.753 kb on - strand at 5079.753 kb on - strand at 5079.753 kb on - strand at 5079.753 kb on - strand at 5079.753 kb on - strand at 5079.789 kb on - strand at 5079.789 kb on - strand at 5079.914 kb on - strand at 5079.917 kb on + strand at 5080.030 kb on + strand, within TX73_023365 at 5080.030 kb on + strand, within TX73_023365 at 5080.038 kb on - strand, within TX73_023365 at 5080.038 kb on - strand, within TX73_023365 at 5080.049 kb on - strand, within TX73_023365 at 5080.056 kb on + strand, within TX73_023365 at 5080.056 kb on + strand, within TX73_023365 at 5080.071 kb on - strand, within TX73_023365 at 5080.081 kb on - strand at 5080.092 kb on + strand at 5080.114 kb on + strand at 5080.114 kb on + strand at 5080.122 kb on - strand at 5080.122 kb on - strand at 5080.164 kb on + strand, within TX73_023370 at 5080.172 kb on + strand, within TX73_023370 at 5080.172 kb on + strand, within TX73_023370 at 5080.257 kb on - strand, within TX73_023370 at 5080.274 kb on + strand, within TX73_023370 at 5080.285 kb on + strand, within TX73_023370 at 5080.403 kb on + strand at 5080.408 kb on + strand at 5080.452 kb on + strand at 5080.457 kb on + strand at 5080.457 kb on + strand at 5080.465 kb on - strand at 5080.493 kb on - strand at 5080.508 kb on - strand at 5080.621 kb on - strand, within TX73_023375 at 5080.625 kb on + strand, within TX73_023375 at 5080.628 kb on - strand, within TX73_023375 at 5080.642 kb on + strand, within TX73_023375 at 5080.677 kb on + strand, within TX73_023375 at 5080.677 kb on + strand, within TX73_023375 at 5080.685 kb on - strand, within TX73_023375 at 5080.685 kb on - strand, within TX73_023375 at 5080.707 kb on - strand, within TX73_023375 at 5080.714 kb on + strand, within TX73_023375 at 5080.722 kb on - strand, within TX73_023375 at 5080.734 kb on + strand, within TX73_023375 at 5080.739 kb on + strand, within TX73_023375 at 5080.739 kb on + strand, within TX73_023375 at 5080.785 kb on + strand, within TX73_023375 at 5080.793 kb on - strand, within TX73_023375 at 5080.800 kb on + strand, within TX73_023375 at 5080.806 kb on - strand, within TX73_023375 at 5080.817 kb on + strand, within TX73_023375 at 5080.818 kb on + strand, within TX73_023375 at 5080.824 kb on + strand, within TX73_023375 at 5080.824 kb on + strand, within TX73_023375 at 5080.826 kb on - strand, within TX73_023375 at 5080.827 kb on - strand, within TX73_023375 at 5080.834 kb on + strand, within TX73_023375 at 5080.867 kb on - strand, within TX73_023375 at 5080.871 kb on + strand, within TX73_023375 at 5080.884 kb on - strand, within TX73_023375 at 5080.914 kb on + strand, within TX73_023375 at 5080.927 kb on - strand, within TX73_023375 at 5080.945 kb on - strand, within TX73_023375 at 5080.959 kb on - strand, within TX73_023375 at 5080.984 kb on + strand, within TX73_023375 at 5080.989 kb on + strand, within TX73_023375 at 5080.992 kb on - strand, within TX73_023375 at 5080.992 kb on - strand, within TX73_023375 at 5080.992 kb on - strand, within TX73_023375 at 5081.010 kb on + strand, within TX73_023375 at 5081.010 kb on + strand, within TX73_023375 at 5081.018 kb on - strand, within TX73_023375 at 5081.077 kb on - strand, within TX73_023375 at 5081.077 kb on - strand, within TX73_023375 at 5081.083 kb on - strand, within TX73_023375 at 5081.136 kb on + strand at 5081.136 kb on + strand at 5081.136 kb on + strand at 5081.144 kb on - strand at 5081.144 kb on - strand at 5081.179 kb on - strand at 5081.208 kb on + strand at 5081.226 kb on + strand at 5081.227 kb on + strand at 5081.235 kb on - strand at 5081.406 kb on + strand at 5081.406 kb on + strand at 5081.406 kb on + strand at 5081.415 kb on - strand at 5081.417 kb on + strand at 5081.428 kb on + strand at 5081.473 kb on - strand, within TX73_023380 at 5081.480 kb on - strand, within TX73_023380 at 5081.480 kb on - strand, within TX73_023380 at 5081.480 kb on - strand, within TX73_023380 at 5081.487 kb on + strand, within TX73_023380 at 5081.496 kb on + strand, within TX73_023380 at 5081.497 kb on + strand, within TX73_023380 at 5081.497 kb on + strand, within TX73_023380 at 5081.504 kb on - strand, within TX73_023380 at 5081.532 kb on + strand, within TX73_023380 at 5081.545 kb on - strand, within TX73_023380 at 5081.557 kb on - strand, within TX73_023380 at 5081.567 kb on - strand, within TX73_023380 at 5081.572 kb on + strand, within TX73_023380 at 5081.572 kb on + strand, within TX73_023380 at 5081.572 kb on + strand, within TX73_023380 at 5081.580 kb on + strand, within TX73_023380 at 5081.608 kb on + strand, within TX73_023380 at 5081.618 kb on + strand, within TX73_023380 at 5081.626 kb on - strand, within TX73_023380 at 5081.629 kb on + strand, within TX73_023380 at 5081.629 kb on + strand, within TX73_023380 at 5081.639 kb on + strand, within TX73_023380 at 5081.667 kb on + strand at 5081.675 kb on - strand at 5081.685 kb on - strand at 5081.704 kb on + strand at 5081.800 kb on + strand at 5081.820 kb on + strand at 5081.820 kb on + strand at 5081.828 kb on - strand at 5081.828 kb on - strand at 5081.851 kb on + strand at 5081.858 kb on - strand at 5081.868 kb on - strand at 5081.956 kb on + strand at 5081.962 kb on + strand at 5081.970 kb on - strand at 5082.032 kb on + strand at 5082.040 kb on - strand, within TX73_023385 at 5082.097 kb on + strand, within TX73_023385 at 5082.097 kb on + strand, within TX73_023385 at 5082.113 kb on - strand, within TX73_023385 at 5082.136 kb on - strand, within TX73_023385 at 5082.146 kb on + strand, within TX73_023385 at 5082.149 kb on - strand, within TX73_023385
Per-strain Table
Position Strand Gene LocusTag Fraction sodium isethionate sulfur source remove 5,079,522 + -0.6 5,079,538 + +0.2 5,079,540 + -2.1 5,079,548 - -0.9 5,079,578 + +0.3 5,079,586 - -1.4 5,079,619 - +0.2 5,079,637 + +0.2 5,079,745 + -0.8 5,079,753 - +0.9 5,079,753 - +0.6 5,079,753 - +0.3 5,079,753 - -1.7 5,079,753 - -0.1 5,079,789 - -1.2 5,079,789 - -0.9 5,079,914 - +0.4 5,079,917 + +0.3 5,080,030 + TX73_023365 0.61 -0.0 5,080,030 + TX73_023365 0.61 -0.4 5,080,038 - TX73_023365 0.66 +1.2 5,080,038 - TX73_023365 0.66 -1.0 5,080,049 - TX73_023365 0.72 -0.5 5,080,056 + TX73_023365 0.76 +0.4 5,080,056 + TX73_023365 0.76 -0.8 5,080,071 - TX73_023365 0.84 -0.6 5,080,081 - +0.1 5,080,092 + +0.3 5,080,114 + -0.2 5,080,114 + +0.1 5,080,122 - -0.3 5,080,122 - -0.1 5,080,164 + TX73_023370 0.13 +0.1 5,080,172 + TX73_023370 0.17 -0.2 5,080,172 + TX73_023370 0.17 +1.2 5,080,257 - TX73_023370 0.56 +0.4 5,080,274 + TX73_023370 0.63 +1.0 5,080,285 + TX73_023370 0.68 -1.3 5,080,403 + +0.8 5,080,408 + -1.4 5,080,452 + -2.0 5,080,457 + -0.4 5,080,457 + -1.3 5,080,465 - -0.3 5,080,493 - -0.1 5,080,508 - +0.9 5,080,621 - TX73_023375 0.19 -0.1 5,080,625 + TX73_023375 0.20 -0.5 5,080,628 - TX73_023375 0.20 +0.5 5,080,642 + TX73_023375 0.22 -2.3 5,080,677 + TX73_023375 0.28 -0.7 5,080,677 + TX73_023375 0.28 -0.3 5,080,685 - TX73_023375 0.29 -0.9 5,080,685 - TX73_023375 0.29 +0.7 5,080,707 - TX73_023375 0.32 -0.9 5,080,714 + TX73_023375 0.33 -1.7 5,080,722 - TX73_023375 0.34 -0.0 5,080,734 + TX73_023375 0.36 -0.7 5,080,739 + TX73_023375 0.37 -1.2 5,080,739 + TX73_023375 0.37 -1.1 5,080,785 + TX73_023375 0.43 +0.8 5,080,793 - TX73_023375 0.44 +0.1 5,080,800 + TX73_023375 0.45 +0.1 5,080,806 - TX73_023375 0.46 -0.2 5,080,817 + TX73_023375 0.48 +0.7 5,080,818 + TX73_023375 0.48 -0.3 5,080,824 + TX73_023375 0.49 +0.4 5,080,824 + TX73_023375 0.49 -0.5 5,080,826 - TX73_023375 0.49 -0.8 5,080,827 - TX73_023375 0.49 -0.3 5,080,834 + TX73_023375 0.50 -1.3 5,080,867 - TX73_023375 0.55 -0.4 5,080,871 + TX73_023375 0.56 +0.4 5,080,884 - TX73_023375 0.58 -0.6 5,080,914 + TX73_023375 0.62 +0.9 5,080,927 - TX73_023375 0.64 +0.3 5,080,945 - TX73_023375 0.66 -0.1 5,080,959 - TX73_023375 0.68 +0.3 5,080,984 + TX73_023375 0.72 +0.6 5,080,989 + TX73_023375 0.73 -2.6 5,080,992 - TX73_023375 0.73 -1.1 5,080,992 - TX73_023375 0.73 -0.1 5,080,992 - TX73_023375 0.73 -0.1 5,081,010 + TX73_023375 0.76 -0.1 5,081,010 + TX73_023375 0.76 -0.7 5,081,018 - TX73_023375 0.77 -2.7 5,081,077 - TX73_023375 0.86 +0.9 5,081,077 - TX73_023375 0.86 -1.4 5,081,083 - TX73_023375 0.86 +0.9 5,081,136 + -0.4 5,081,136 + +0.3 5,081,136 + +0.5 5,081,144 - -0.3 5,081,144 - -0.7 5,081,179 - +0.6 5,081,208 + -1.6 5,081,226 + +1.0 5,081,227 + -1.5 5,081,235 - -1.4 5,081,406 + -0.0 5,081,406 + +0.5 5,081,406 + -0.9 5,081,415 - +0.1 5,081,417 + -0.8 5,081,428 + -0.3 5,081,473 - TX73_023380 0.25 +0.3 5,081,480 - TX73_023380 0.27 -0.6 5,081,480 - TX73_023380 0.27 +0.1 5,081,480 - TX73_023380 0.27 -2.7 5,081,487 + TX73_023380 0.30 +0.2 5,081,496 + TX73_023380 0.33 -0.6 5,081,497 + TX73_023380 0.34 -0.7 5,081,497 + TX73_023380 0.34 -0.4 5,081,504 - TX73_023380 0.36 -0.3 5,081,532 + TX73_023380 0.47 -0.6 5,081,545 - TX73_023380 0.52 -0.5 5,081,557 - TX73_023380 0.57 +1.2 5,081,567 - TX73_023380 0.61 +0.8 5,081,572 + TX73_023380 0.62 -1.7 5,081,572 + TX73_023380 0.62 -0.1 5,081,572 + TX73_023380 0.62 +0.2 5,081,580 + TX73_023380 0.66 +0.5 5,081,608 + TX73_023380 0.76 -2.4 5,081,618 + TX73_023380 0.80 +1.3 5,081,626 - TX73_023380 0.83 +0.0 5,081,629 + TX73_023380 0.84 +0.5 5,081,629 + TX73_023380 0.84 -0.6 5,081,639 + TX73_023380 0.88 -0.5 5,081,667 + +1.1 5,081,675 - +1.2 5,081,685 - +0.5 5,081,704 + -0.7 5,081,800 + -0.3 5,081,820 + -0.3 5,081,820 + +0.1 5,081,828 - -2.8 5,081,828 - -1.0 5,081,851 + +0.3 5,081,858 - +0.5 5,081,868 - +0.4 5,081,956 + -0.0 5,081,962 + -0.1 5,081,970 - -0.0 5,082,032 + +0.5 5,082,040 - TX73_023385 0.10 -1.6 5,082,097 + TX73_023385 0.13 +1.0 5,082,097 + TX73_023385 0.13 +1.3 5,082,113 - TX73_023385 0.14 -0.6 5,082,136 - TX73_023385 0.15 +0.8 5,082,146 + TX73_023385 0.16 +0.1 5,082,149 - TX73_023385 0.16 +1.2
Or see this region's nucleotide sequence