Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014360

Experiment: sodium isethionate sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium isethionate sulfur source
3,142,258	-		TX73_014355	0.36	+1.1
3,142,290	+		TX73_014355	0.39	+0.2
3,142,298	-		TX73_014355	0.39	-0.4
3,142,300	+		TX73_014355	0.39	+0.9
3,142,303	+		TX73_014355	0.40	+0.3
3,142,311	-		TX73_014355	0.40	+0.4
3,142,322	+		TX73_014355	0.41	-0.3
3,142,354	-		TX73_014355	0.44	-0.2
3,142,357	+		TX73_014355	0.44	-1.2
3,142,362	+		TX73_014355	0.45	-0.1
3,142,362	+		TX73_014355	0.45	-2.0
3,142,362	+		TX73_014355	0.45	+0.6
3,142,365	-		TX73_014355	0.45	+1.4
3,142,365	-		TX73_014355	0.45	+0.8
3,142,370	-		TX73_014355	0.46	-0.8
3,142,370	-		TX73_014355	0.46	+1.3
3,142,370	-		TX73_014355	0.46	+0.2
3,142,370	-		TX73_014355	0.46	-0.8
3,142,380	+		TX73_014355	0.46	-0.0
3,142,389	+		TX73_014355	0.47	+0.5
3,142,395	+		TX73_014355	0.48	-1.2
3,142,400	+		TX73_014355	0.48	-0.7
3,142,404	+		TX73_014355	0.49	-1.4
3,142,405	+		TX73_014355	0.49	-0.8
3,142,406	-		TX73_014355	0.49	+0.7
3,142,412	-		TX73_014355	0.49	-0.9
3,142,419	+		TX73_014355	0.50	-0.5
3,142,446	+		TX73_014355	0.52	+0.4
3,142,475	+		TX73_014355	0.55	-0.2
3,142,486	+		TX73_014355	0.56	-0.2
3,142,486	+		TX73_014355	0.56	-2.1
3,142,486	+		TX73_014355	0.56	-0.4
3,142,594	+		TX73_014355	0.65	+2.4
3,142,594	+		TX73_014355	0.65	+0.7
3,142,594	+		TX73_014355	0.65	+0.5
3,142,599	+		TX73_014355	0.65	+0.2
3,142,599	+		TX73_014355	0.65	+0.2
3,142,600	+		TX73_014355	0.66	+0.8
3,142,602	-		TX73_014355	0.66	-2.0
3,142,602	-		TX73_014355	0.66	-0.7
3,142,604	-		TX73_014355	0.66	-0.5
3,142,648	+		TX73_014355	0.70	-0.7
3,142,654	-		TX73_014355	0.70	-0.7
3,142,656	-		TX73_014355	0.70	-2.0
3,142,656	-		TX73_014355	0.70	+0.9
3,142,677	+		TX73_014355	0.72	-0.5
3,142,685	-		TX73_014355	0.73	+1.8
3,142,689	+		TX73_014355	0.73	-2.0
3,142,689	+		TX73_014355	0.73	+0.2
3,142,689	+		TX73_014355	0.73	+1.4
3,142,689	+		TX73_014355	0.73	-1.3
3,142,689	+		TX73_014355	0.73	+0.4
3,142,697	-		TX73_014355	0.74	+0.3
3,142,702	+		TX73_014355	0.74	+0.8
3,142,702	-		TX73_014355	0.74	+0.9
3,142,710	+		TX73_014355	0.75	-1.6
3,142,710	-		TX73_014355	0.75	+1.1
3,142,748	+		TX73_014355	0.78	-1.0
3,142,758	+		TX73_014355	0.79	-0.9
3,142,761	-		TX73_014355	0.80	+1.5
3,142,763	+		TX73_014355	0.80	+0.7
3,142,766	-		TX73_014355	0.80	-2.3
3,142,771	-		TX73_014355	0.80	+1.0
3,142,778	+		TX73_014355	0.81	+0.4
3,142,780	+		TX73_014355	0.81	+0.3
3,142,799	-		TX73_014355	0.83	-3.1
3,142,814	-		TX73_014355	0.84	+0.5
3,142,820	-		TX73_014355	0.85	+0.7
3,142,835	-		TX73_014355	0.86	-2.3
3,142,837	-		TX73_014355	0.86	-0.7
3,142,868	-		TX73_014355	0.89	+1.8
3,142,868	-		TX73_014355	0.89	+1.7
3,142,868	-		TX73_014355	0.89	+0.2
3,142,868	-		TX73_014355	0.89	-2.5
3,142,893	+				-1.0
3,142,893	+				+0.6
3,142,893	+				-0.8
3,142,893	+				+2.3
3,142,893	+				+0.1
3,142,893	+				+0.3
3,142,893	+				+0.7
3,142,893	+				-0.0
3,142,893	+				+0.4
3,142,893	+				+0.9
3,142,893	+				+1.4
3,142,893	+				-0.7
3,142,893	+				+0.1
3,142,893	+				-0.0
3,142,893	-				-0.4
3,142,898	+				+0.5
3,142,898	+				-1.9
3,142,898	+				-1.8
3,142,901	-				+0.9
3,142,901	-				+0.6
3,142,901	-				-2.9
3,142,901	-				+0.0
3,142,901	-				+1.1
3,142,901	-				+0.2
3,142,901	-				+0.4
3,142,901	-				+0.8
3,142,901	-				+1.8
3,142,901	-				+1.2
3,142,901	-				+0.7
3,142,901	-				+0.4
3,142,901	-				-1.7
3,142,901	-				+0.2
3,142,906	-				-0.6
3,142,906	-				+2.2
3,142,906	-				-0.7
3,142,926	-				-1.5
3,142,931	+				+0.7
3,142,939	-				-0.6
3,142,949	+				-2.3
3,142,949	+				+0.2
3,142,949	+				+1.3
3,142,952	-				+0.5
3,142,957	-				-0.0
3,142,959	+				+1.0
3,142,959	+				+1.3
3,142,973	-				+0.2
3,142,976	+				+0.1
3,142,992	-				+1.2
3,142,992	-				+0.3
3,143,004	+				-1.2
3,143,004	+				+0.8
3,143,004	+				+0.6
3,143,004	+				-0.8
3,143,012	-				-2.4
3,143,023	-				-0.6
3,143,025	+				-1.3
3,143,033	-				+0.4
3,143,033	-				-0.2
3,143,092	-				-1.6
3,143,110	-				+0.2
3,143,123	+				-2.1
3,143,141	-				-0.2
3,143,161	+				+0.0
3,143,161	+				-2.6
3,143,164	-				+1.6
3,143,176	+				+0.6
3,143,187	+				-0.0
3,143,198	+				-2.0
3,143,208	+				-0.1
3,143,212	-				+0.1
3,143,213	+				+0.6
3,143,327	+				-0.3
3,143,327	+				+0.3
3,143,330	-				+1.7
3,143,330	-				+0.6
3,143,364	+		TX73_014360	0.11	+0.0
3,143,394	-		TX73_014360	0.14	-1.5
3,143,417	-		TX73_014360	0.17	+0.5
3,143,417	-		TX73_014360	0.17	-0.6
3,143,417	-		TX73_014360	0.17	-0.7
3,143,433	-		TX73_014360	0.18	+0.6
3,143,458	+		TX73_014360	0.21	+1.7
3,143,460	-		TX73_014360	0.21	-1.8
3,143,466	-		TX73_014360	0.22	+2.0
3,143,466	-		TX73_014360	0.22	-1.2
3,143,519	+		TX73_014360	0.28	-1.7
3,143,553	-		TX73_014360	0.31	+0.8
3,143,576	+		TX73_014360	0.34	-0.2
3,143,584	-		TX73_014360	0.34	+1.0
3,143,584	-		TX73_014360	0.34	+0.2
3,143,584	-		TX73_014360	0.34	+1.5
3,143,584	-		TX73_014360	0.34	-0.4
3,143,606	+		TX73_014360	0.37	-1.2
3,143,614	-		TX73_014360	0.38	+1.4
3,143,621	+		TX73_014360	0.38	+1.1
3,143,639	-		TX73_014360	0.40	-0.0
3,143,641	+		TX73_014360	0.40	-0.6
3,143,645	+		TX73_014360	0.41	-0.2
3,143,664	+		TX73_014360	0.43	-0.1
3,143,664	+		TX73_014360	0.43	+1.2
3,143,699	-		TX73_014360	0.47	+0.5
3,143,764	-		TX73_014360	0.53	-0.0
3,143,791	+		TX73_014360	0.56	+0.0
3,143,801	+		TX73_014360	0.57	-0.7
3,143,832	+		TX73_014360	0.61	-0.1
3,143,848	+		TX73_014360	0.62	-1.4
3,143,848	-		TX73_014360	0.62	-0.2
3,143,872	-		TX73_014360	0.65	-1.0
3,143,885	+		TX73_014360	0.66	-0.7
3,143,918	+		TX73_014360	0.70	-0.5
3,144,008	-		TX73_014360	0.79	+1.3
3,144,038	+		TX73_014360	0.82	-1.6
3,144,046	-		TX73_014360	0.83	-0.8
3,144,089	-		TX73_014360	0.88	-0.4
3,144,114	+				+0.6
3,144,114	+				+0.7
3,144,114	+				+0.2
3,144,114	+				+0.2
3,144,114	+				+1.2
3,144,114	+				+1.1
3,144,114	+				+0.8
3,144,114	+				-0.2
3,144,122	-				+0.6
3,144,122	-				+0.5
3,144,122	-				-1.1
3,144,132	-				+0.8
3,144,160	-				-0.5
3,144,181	+				+0.4
3,144,199	+				-0.6
3,144,207	-				+2.0
3,144,243	-				-0.7
3,144,243	-				+0.8
3,144,243	-				+0.8
3,144,278	-				-1.0
3,144,283	-				+0.5
3,144,305	+				-2.2
3,144,313	+				-1.8
3,144,313	-				+0.6
3,144,326	+				+0.1
3,144,326	+				+0.1
3,144,337	+		TX73_014365	0.11	-1.4
3,144,337	+		TX73_014365	0.11	+1.0
3,144,340	-		TX73_014365	0.11	-1.5
3,144,340	-		TX73_014365	0.11	+2.0
3,144,340	-		TX73_014365	0.11	-0.3
3,144,340	-		TX73_014365	0.11	-0.8
3,144,340	-		TX73_014365	0.11	-0.3
3,144,347	+		TX73_014365	0.12	-0.4
3,144,381	+		TX73_014365	0.15	+1.8
3,144,403	+		TX73_014365	0.18	+0.8
3,144,421	-		TX73_014365	0.20	+0.3
3,144,433	-		TX73_014365	0.21	+1.7
3,144,433	-		TX73_014365	0.21	-0.2
3,144,497	+		TX73_014365	0.28	+0.2
3,144,498	+		TX73_014365	0.28	-0.4
3,144,498	+		TX73_014365	0.28	+1.3
3,144,506	-		TX73_014365	0.29	+0.3
3,144,514	+		TX73_014365	0.29	-0.1
3,144,559	-		TX73_014365	0.34	+0.2
3,144,564	-		TX73_014365	0.35	-0.0
3,144,612	-		TX73_014365	0.40	-3.2
3,144,655	+		TX73_014365	0.44	+0.8
3,144,677	+		TX73_014365	0.47	-1.4
3,144,683	-		TX73_014365	0.47	-1.6
3,144,724	-		TX73_014365	0.52	+0.4
3,144,755	+		TX73_014365	0.55	-0.0
3,144,755	+		TX73_014365	0.55	-0.2
3,144,771	-		TX73_014365	0.56	-1.2
3,144,777	-		TX73_014365	0.57	+0.3
3,144,813	+		TX73_014365	0.61	-0.0
3,144,816	+		TX73_014365	0.61	+0.4
3,144,837	+		TX73_014365	0.63	-1.3
3,144,844	+		TX73_014365	0.64	+0.8
3,144,844	+		TX73_014365	0.64	+0.5
3,144,844	+		TX73_014365	0.64	+1.0
3,144,847	-		TX73_014365	0.64	-0.3
3,144,847	-		TX73_014365	0.64	+0.6
3,144,849	+		TX73_014365	0.65	-1.4
3,144,852	-		TX73_014365	0.65	+0.5
3,144,852	-		TX73_014365	0.65	+0.3
3,144,852	-		TX73_014365	0.65	+0.8
3,144,852	-		TX73_014365	0.65	-0.2
3,144,852	-		TX73_014365	0.65	+1.3
3,144,852	-		TX73_014365	0.65	+0.6
3,144,857	-		TX73_014365	0.66	+0.9
3,144,857	-		TX73_014365	0.66	+0.6
3,144,857	-		TX73_014365	0.66	-0.8
3,144,857	-		TX73_014365	0.66	-0.4
3,144,880	+		TX73_014365	0.68	+0.4
3,144,888	-		TX73_014365	0.69	+0.2
3,144,912	-		TX73_014365	0.71	-0.9
3,144,912	-		TX73_014365	0.71	+0.1
3,144,917	-		TX73_014365	0.72	+1.4
3,144,930	-		TX73_014365	0.73	+0.2
3,144,943	-		TX73_014365	0.75	+0.3
3,144,963	+		TX73_014365	0.77	-2.2
3,144,986	+		TX73_014365	0.79	+0.6
3,144,988	+		TX73_014365	0.79	-1.0
3,144,994	-		TX73_014365	0.80	-2.4
3,144,998	+		TX73_014365	0.80	+1.1
3,145,014	+		TX73_014365	0.82	+0.9
3,145,032	+		TX73_014365	0.84	-1.6
3,145,039	+		TX73_014365	0.85	-1.1
3,145,056	+		TX73_014365	0.86	+1.1
3,145,072	+		TX73_014365	0.88	+0.1
3,145,082	+		TX73_014365	0.89	-0.7
3,145,082	+		TX73_014365	0.89	-0.7
3,145,098	+				+0.4
3,145,098	+				-1.2
3,145,106	-				-1.5
3,145,117	+				-0.6
3,145,118	-				+0.4
3,145,125	-				+0.1
3,145,140	-				+0.2
3,145,168	-				-0.4
3,145,171	+				+0.0
3,145,188	-				-0.1
3,145,188	-				-0.9
3,145,188	-				+0.6
3,145,193	-				-0.7