Experiment: Taurine sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_001550 and TX73_001555 overlap by 4 nucleotides TX73_001555 and TX73_001560 are separated by 96 nucleotides TX73_001560 and TX73_001565 are separated by 35 nucleotides
TX73_001550: TX73_001550 - kinase/pyrophosphorylase, at 329,002 to 329,841
_001550
TX73_001555: TX73_001555 - Maf family protein, at 329,838 to 330,446
_001555
TX73_001560: TX73_001560 - dephospho-CoA kinase, at 330,543 to 331,142
_001560
TX73_001565: TX73_001565 - DNA polymerase III subunit epsilon, at 331,178 to 331,876
_001565
Position (kb) 329
330
331 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 328.975 kb on + strand at 328.984 kb on + strand at 328.985 kb on + strand at 328.985 kb on + strand at 328.985 kb on + strand at 328.985 kb on + strand at 328.986 kb on - strand at 328.992 kb on - strand at 328.992 kb on - strand at 328.993 kb on - strand at 328.993 kb on - strand at 328.994 kb on - strand at 328.997 kb on - strand at 329.002 kb on - strand at 329.002 kb on - strand at 329.044 kb on + strand at 329.071 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.073 kb on + strand at 329.079 kb on + strand at 329.079 kb on + strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.081 kb on - strand at 329.083 kb on - strand at 329.087 kb on - strand, within TX73_001550 at 329.089 kb on + strand, within TX73_001550 at 329.089 kb on + strand, within TX73_001550 at 329.097 kb on - strand, within TX73_001550 at 329.097 kb on - strand, within TX73_001550 at 329.097 kb on - strand, within TX73_001550 at 329.102 kb on + strand, within TX73_001550 at 329.102 kb on + strand, within TX73_001550 at 329.110 kb on - strand, within TX73_001550 at 329.116 kb on + strand, within TX73_001550 at 329.121 kb on + strand, within TX73_001550 at 329.121 kb on + strand, within TX73_001550 at 329.121 kb on + strand, within TX73_001550 at 329.121 kb on + strand, within TX73_001550 at 329.121 kb on + strand, within TX73_001550 at 329.121 kb on + strand, within TX73_001550 at 329.122 kb on + strand, within TX73_001550 at 329.122 kb on + strand, within TX73_001550 at 329.129 kb on - strand, within TX73_001550 at 329.129 kb on - strand, within TX73_001550 at 329.130 kb on - strand, within TX73_001550 at 329.130 kb on - strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.141 kb on + strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.149 kb on - strand, within TX73_001550 at 329.177 kb on - strand, within TX73_001550 at 329.189 kb on + strand, within TX73_001550 at 329.194 kb on + strand, within TX73_001550 at 329.199 kb on + strand, within TX73_001550 at 329.202 kb on - strand, within TX73_001550 at 329.202 kb on - strand, within TX73_001550 at 329.202 kb on - strand, within TX73_001550 at 329.206 kb on + strand, within TX73_001550 at 329.207 kb on - strand, within TX73_001550 at 329.207 kb on - strand, within TX73_001550 at 329.207 kb on - strand, within TX73_001550 at 329.208 kb on + strand, within TX73_001550 at 329.208 kb on + strand, within TX73_001550 at 329.208 kb on + strand, within TX73_001550 at 329.216 kb on - strand, within TX73_001550 at 329.231 kb on + strand, within TX73_001550 at 329.259 kb on - strand, within TX73_001550 at 329.259 kb on - strand, within TX73_001550 at 329.287 kb on + strand, within TX73_001550 at 329.295 kb on - strand, within TX73_001550 at 329.295 kb on - strand, within TX73_001550 at 329.297 kb on + strand, within TX73_001550 at 329.307 kb on - strand, within TX73_001550 at 329.326 kb on - strand, within TX73_001550 at 329.328 kb on + strand, within TX73_001550 at 329.329 kb on + strand, within TX73_001550 at 329.337 kb on - strand, within TX73_001550 at 329.337 kb on - strand, within TX73_001550 at 329.349 kb on - strand, within TX73_001550 at 329.349 kb on - strand, within TX73_001550 at 329.352 kb on + strand, within TX73_001550 at 329.396 kb on - strand, within TX73_001550 at 329.398 kb on + strand, within TX73_001550 at 329.413 kb on + strand, within TX73_001550 at 329.413 kb on + strand, within TX73_001550 at 329.421 kb on + strand, within TX73_001550 at 329.421 kb on + strand, within TX73_001550 at 329.428 kb on + strand, within TX73_001550 at 329.429 kb on + strand, within TX73_001550 at 329.437 kb on - strand, within TX73_001550 at 329.437 kb on - strand, within TX73_001550 at 329.449 kb on + strand, within TX73_001550 at 329.449 kb on + strand, within TX73_001550 at 329.449 kb on + strand, within TX73_001550 at 329.452 kb on - strand, within TX73_001550 at 329.454 kb on + strand, within TX73_001550 at 329.457 kb on - strand, within TX73_001550 at 329.463 kb on + strand, within TX73_001550 at 329.463 kb on + strand, within TX73_001550 at 329.463 kb on + strand, within TX73_001550 at 329.489 kb on + strand, within TX73_001550 at 329.495 kb on + strand, within TX73_001550 at 329.497 kb on - strand, within TX73_001550 at 329.503 kb on - strand, within TX73_001550 at 329.526 kb on + strand, within TX73_001550 at 329.533 kb on - strand, within TX73_001550 at 329.543 kb on - strand, within TX73_001550 at 329.586 kb on + strand, within TX73_001550 at 329.588 kb on + strand, within TX73_001550 at 329.601 kb on + strand, within TX73_001550 at 329.627 kb on - strand, within TX73_001550 at 329.634 kb on + strand, within TX73_001550 at 329.665 kb on + strand, within TX73_001550 at 329.673 kb on + strand, within TX73_001550 at 329.673 kb on + strand, within TX73_001550 at 329.673 kb on + strand, within TX73_001550 at 329.673 kb on + strand, within TX73_001550 at 329.673 kb on + strand, within TX73_001550 at 329.673 kb on + strand, within TX73_001550 at 329.673 kb on + strand, within TX73_001550 at 329.681 kb on - strand, within TX73_001550 at 329.681 kb on - strand, within TX73_001550 at 329.681 kb on - strand, within TX73_001550 at 329.681 kb on - strand, within TX73_001550 at 329.681 kb on - strand, within TX73_001550 at 329.681 kb on - strand, within TX73_001550 at 329.681 kb on - strand, within TX73_001550 at 329.681 kb on - strand, within TX73_001550 at 329.699 kb on + strand, within TX73_001550 at 329.719 kb on + strand, within TX73_001550 at 329.719 kb on + strand, within TX73_001550 at 329.725 kb on - strand, within TX73_001550 at 329.734 kb on + strand, within TX73_001550 at 329.737 kb on - strand, within TX73_001550 at 329.754 kb on + strand, within TX73_001550 at 329.759 kb on - strand at 329.762 kb on + strand at 329.821 kb on + strand at 329.821 kb on + strand at 329.822 kb on + strand at 329.828 kb on - strand at 329.828 kb on - strand at 329.849 kb on + strand at 330.075 kb on - strand, within TX73_001555 at 330.432 kb on - strand at 330.432 kb on - strand at 330.465 kb on + strand at 330.476 kb on + strand at 330.478 kb on + strand at 330.478 kb on + strand at 330.478 kb on + strand at 330.478 kb on + strand at 330.478 kb on + strand at 330.478 kb on + strand at 330.486 kb on - strand at 330.486 kb on - strand at 330.486 kb on - strand at 330.486 kb on - strand at 330.486 kb on - strand at 330.486 kb on - strand at 330.534 kb on + strand at 330.554 kb on - strand at 331.086 kb on + strand at 331.153 kb on + strand at 331.153 kb on + strand at 331.167 kb on + strand at 331.167 kb on + strand at 331.170 kb on - strand at 331.172 kb on + strand at 331.175 kb on - strand at 331.175 kb on - strand at 331.180 kb on + strand at 331.180 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Taurine sulfur source remove 328,975 + -0.2 328,984 + +0.7 328,985 + -0.2 328,985 + -1.1 328,985 + +1.5 328,985 + -0.4 328,986 - -0.3 328,992 - +0.5 328,992 - +0.2 328,993 - +0.8 328,993 - -1.5 328,994 - -1.2 328,997 - -0.2 329,002 - -0.1 329,002 - -0.2 329,044 + -1.1 329,071 + -0.2 329,073 + +0.3 329,073 + +0.7 329,073 + -0.3 329,073 + -1.0 329,073 + -0.9 329,073 + -0.4 329,073 + -0.3 329,073 + +0.2 329,073 + -1.2 329,073 + -0.8 329,073 + -0.9 329,073 + +0.2 329,073 + -0.4 329,073 + -1.1 329,073 + -0.7 329,073 + -2.5 329,073 + -1.5 329,079 + +2.0 329,079 + -0.4 329,081 - -0.8 329,081 - -1.8 329,081 - +1.1 329,081 - +0.5 329,081 - -3.0 329,081 - -2.0 329,081 - +0.5 329,081 - -1.0 329,081 - +0.0 329,081 - -0.1 329,081 - -0.4 329,081 - -0.4 329,081 - -0.6 329,081 - -1.9 329,083 - -0.4 329,087 - TX73_001550 0.10 -0.6 329,089 + TX73_001550 0.10 +1.8 329,089 + TX73_001550 0.10 -0.9 329,097 - TX73_001550 0.11 -1.8 329,097 - TX73_001550 0.11 +0.0 329,097 - TX73_001550 0.11 -0.5 329,102 + TX73_001550 0.12 -2.7 329,102 + TX73_001550 0.12 -0.8 329,110 - TX73_001550 0.13 -1.2 329,116 + TX73_001550 0.14 -0.0 329,121 + TX73_001550 0.14 +0.8 329,121 + TX73_001550 0.14 +0.3 329,121 + TX73_001550 0.14 -0.3 329,121 + TX73_001550 0.14 -2.3 329,121 + TX73_001550 0.14 -0.9 329,121 + TX73_001550 0.14 -1.3 329,122 + TX73_001550 0.14 -0.4 329,122 + TX73_001550 0.14 +0.1 329,129 - TX73_001550 0.15 -0.2 329,129 - TX73_001550 0.15 -0.4 329,130 - TX73_001550 0.15 -0.2 329,130 - TX73_001550 0.15 -1.1 329,141 + TX73_001550 0.17 -1.0 329,141 + TX73_001550 0.17 -1.5 329,141 + TX73_001550 0.17 +0.0 329,141 + TX73_001550 0.17 -1.4 329,141 + TX73_001550 0.17 -3.4 329,141 + TX73_001550 0.17 -0.7 329,141 + TX73_001550 0.17 -0.5 329,141 + TX73_001550 0.17 -1.4 329,141 + TX73_001550 0.17 -1.3 329,149 - TX73_001550 0.17 -0.3 329,149 - TX73_001550 0.17 -0.2 329,149 - TX73_001550 0.17 -1.7 329,149 - TX73_001550 0.17 +0.3 329,149 - TX73_001550 0.17 -1.0 329,149 - TX73_001550 0.17 -2.3 329,149 - TX73_001550 0.17 -0.1 329,149 - TX73_001550 0.17 +0.1 329,149 - TX73_001550 0.17 -0.5 329,149 - TX73_001550 0.17 -3.0 329,149 - TX73_001550 0.17 -0.4 329,149 - TX73_001550 0.17 -0.3 329,177 - TX73_001550 0.21 -0.7 329,189 + TX73_001550 0.22 -1.6 329,194 + TX73_001550 0.23 +0.3 329,199 + TX73_001550 0.23 +0.1 329,202 - TX73_001550 0.24 -0.5 329,202 - TX73_001550 0.24 +0.4 329,202 - TX73_001550 0.24 +0.2 329,206 + TX73_001550 0.24 -0.1 329,207 - TX73_001550 0.24 +0.2 329,207 - TX73_001550 0.24 -0.3 329,207 - TX73_001550 0.24 -2.1 329,208 + TX73_001550 0.25 -0.3 329,208 + TX73_001550 0.25 -0.4 329,208 + TX73_001550 0.25 +0.9 329,216 - TX73_001550 0.25 -1.6 329,231 + TX73_001550 0.27 -0.6 329,259 - TX73_001550 0.31 -1.1 329,259 - TX73_001550 0.31 -0.4 329,287 + TX73_001550 0.34 +1.2 329,295 - TX73_001550 0.35 -1.7 329,295 - TX73_001550 0.35 -0.4 329,297 + TX73_001550 0.35 -2.4 329,307 - TX73_001550 0.36 -2.2 329,326 - TX73_001550 0.39 -0.1 329,328 + TX73_001550 0.39 -0.2 329,329 + TX73_001550 0.39 +0.3 329,337 - TX73_001550 0.40 +0.1 329,337 - TX73_001550 0.40 -1.9 329,349 - TX73_001550 0.41 -1.1 329,349 - TX73_001550 0.41 -0.5 329,352 + TX73_001550 0.42 +1.6 329,396 - TX73_001550 0.47 +0.4 329,398 + TX73_001550 0.47 -2.4 329,413 + TX73_001550 0.49 -1.4 329,413 + TX73_001550 0.49 +1.5 329,421 + TX73_001550 0.50 -0.8 329,421 + TX73_001550 0.50 -2.7 329,428 + TX73_001550 0.51 -0.5 329,429 + TX73_001550 0.51 -2.5 329,437 - TX73_001550 0.52 +0.3 329,437 - TX73_001550 0.52 -2.3 329,449 + TX73_001550 0.53 -1.9 329,449 + TX73_001550 0.53 -1.4 329,449 + TX73_001550 0.53 -2.2 329,452 - TX73_001550 0.54 -0.9 329,454 + TX73_001550 0.54 -1.7 329,457 - TX73_001550 0.54 -2.0 329,463 + TX73_001550 0.55 -1.0 329,463 + TX73_001550 0.55 -2.1 329,463 + TX73_001550 0.55 -1.0 329,489 + TX73_001550 0.58 -1.4 329,495 + TX73_001550 0.59 -1.6 329,497 - TX73_001550 0.59 -1.4 329,503 - TX73_001550 0.60 -3.5 329,526 + TX73_001550 0.62 -2.2 329,533 - TX73_001550 0.63 -1.4 329,543 - TX73_001550 0.64 -2.1 329,586 + TX73_001550 0.70 -1.7 329,588 + TX73_001550 0.70 +0.3 329,601 + TX73_001550 0.71 -1.2 329,627 - TX73_001550 0.74 -2.9 329,634 + TX73_001550 0.75 -2.8 329,665 + TX73_001550 0.79 -2.0 329,673 + TX73_001550 0.80 -1.6 329,673 + TX73_001550 0.80 -1.7 329,673 + TX73_001550 0.80 -1.4 329,673 + TX73_001550 0.80 -0.7 329,673 + TX73_001550 0.80 -2.3 329,673 + TX73_001550 0.80 -1.3 329,673 + TX73_001550 0.80 -0.3 329,681 - TX73_001550 0.81 -2.1 329,681 - TX73_001550 0.81 -0.0 329,681 - TX73_001550 0.81 -2.1 329,681 - TX73_001550 0.81 -0.5 329,681 - TX73_001550 0.81 -4.1 329,681 - TX73_001550 0.81 -0.4 329,681 - TX73_001550 0.81 -0.3 329,681 - TX73_001550 0.81 +0.3 329,699 + TX73_001550 0.83 -1.9 329,719 + TX73_001550 0.85 -1.6 329,719 + TX73_001550 0.85 -1.3 329,725 - TX73_001550 0.86 -0.2 329,734 + TX73_001550 0.87 -0.0 329,737 - TX73_001550 0.88 -1.9 329,754 + TX73_001550 0.90 -1.0 329,759 - -2.3 329,762 + -2.3 329,821 + -0.3 329,821 + +0.2 329,822 + -0.4 329,828 - -0.7 329,828 - +0.6 329,849 + -1.2 330,075 - TX73_001555 0.39 +1.0 330,432 - +0.5 330,432 - +0.2 330,465 + -0.2 330,476 + +1.2 330,478 + +1.2 330,478 + +1.1 330,478 + +0.0 330,478 + -0.4 330,478 + -3.5 330,478 + -0.3 330,486 - +0.3 330,486 - +0.5 330,486 - +0.6 330,486 - +0.6 330,486 - +1.0 330,486 - -1.0 330,534 + -1.0 330,554 - +0.6 331,086 + +0.7 331,153 + +0.3 331,153 + +0.1 331,167 + +0.5 331,167 + +0.3 331,170 - -0.1 331,172 + -0.3 331,175 - -1.4 331,175 - -0.5 331,180 + -0.2 331,180 - +0.8
Or see this region's nucleotide sequence