Experiment: Taurine sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_022475 and TX73_022480 overlap by 40 nucleotides TX73_022480 and TX73_022485 overlap by 74 nucleotides TX73_022485 and TX73_022490 are separated by 81 nucleotides TX73_022490 and TX73_022495 overlap by 13 nucleotides
TX73_022475: TX73_022475 - hypothetical protein, at 4,888,539 to 4,888,748
_022475
TX73_022480: TX73_022480 - HAD family phosphatase, at 4,888,709 to 4,889,452
_022480
TX73_022485: TX73_022485 - TetR/AcrR family transcriptional regulator, at 4,889,379 to 4,890,059
_022485
TX73_022490: TX73_022490 - crotonase/enoyl-CoA hydratase family protein, at 4,890,141 to 4,890,932
_022490
TX73_022495: TX73_022495 - glutathione S-transferase family protein, at 4,890,920 to 4,891,615
_022495
Position (kb) 4889
4890
4891 Strain fitness (log2 ratio) -1
0
1 at 4888.428 kb on + strand at 4888.434 kb on + strand at 4888.446 kb on + strand at 4888.447 kb on - strand at 4888.448 kb on + strand at 4888.454 kb on - strand at 4888.499 kb on + strand at 4888.509 kb on + strand at 4888.509 kb on + strand at 4888.544 kb on + strand at 4888.567 kb on + strand, within TX73_022475 at 4888.710 kb on - strand at 4888.723 kb on - strand at 4888.773 kb on + strand at 4888.786 kb on - strand, within TX73_022480 at 4888.804 kb on + strand, within TX73_022480 at 4888.804 kb on + strand, within TX73_022480 at 4888.812 kb on - strand, within TX73_022480 at 4888.812 kb on - strand, within TX73_022480 at 4888.812 kb on - strand, within TX73_022480 at 4888.812 kb on - strand, within TX73_022480 at 4888.852 kb on - strand, within TX73_022480 at 4888.925 kb on + strand, within TX73_022480 at 4888.930 kb on - strand, within TX73_022480 at 4888.958 kb on - strand, within TX73_022480 at 4889.010 kb on - strand, within TX73_022480 at 4889.035 kb on - strand, within TX73_022480 at 4889.042 kb on - strand, within TX73_022480 at 4889.081 kb on + strand, within TX73_022480 at 4889.117 kb on + strand, within TX73_022480 at 4889.127 kb on - strand, within TX73_022480 at 4889.156 kb on + strand, within TX73_022480 at 4889.156 kb on + strand, within TX73_022480 at 4889.156 kb on + strand, within TX73_022480 at 4889.159 kb on - strand, within TX73_022480 at 4889.164 kb on - strand, within TX73_022480 at 4889.164 kb on - strand, within TX73_022480 at 4889.255 kb on - strand, within TX73_022480 at 4889.311 kb on + strand, within TX73_022480 at 4889.315 kb on - strand, within TX73_022480 at 4889.376 kb on - strand, within TX73_022480 at 4889.447 kb on + strand at 4889.575 kb on - strand, within TX73_022485 at 4889.850 kb on + strand, within TX73_022485 at 4889.976 kb on - strand, within TX73_022485 at 4890.018 kb on + strand at 4890.106 kb on + strand at 4890.134 kb on - strand at 4890.160 kb on - strand at 4890.249 kb on - strand, within TX73_022490 at 4890.299 kb on - strand, within TX73_022490 at 4890.339 kb on - strand, within TX73_022490 at 4890.410 kb on + strand, within TX73_022490 at 4890.418 kb on - strand, within TX73_022490 at 4890.418 kb on - strand, within TX73_022490 at 4890.575 kb on - strand, within TX73_022490 at 4890.582 kb on - strand, within TX73_022490 at 4890.683 kb on + strand, within TX73_022490 at 4890.986 kb on + strand at 4891.013 kb on - strand, within TX73_022495 at 4891.041 kb on + strand, within TX73_022495
Per-strain Table
Position Strand Gene LocusTag Fraction Taurine sulfur source remove 4,888,428 + +0.4 4,888,434 + -0.0 4,888,446 + -0.2 4,888,447 - +0.5 4,888,448 + +0.1 4,888,454 - -0.2 4,888,499 + -0.4 4,888,509 + +0.6 4,888,509 + -0.2 4,888,544 + -1.2 4,888,567 + TX73_022475 0.13 +0.1 4,888,710 - +0.5 4,888,723 - -1.3 4,888,773 + -0.3 4,888,786 - TX73_022480 0.10 -0.1 4,888,804 + TX73_022480 0.13 +0.6 4,888,804 + TX73_022480 0.13 -0.4 4,888,812 - TX73_022480 0.14 -0.5 4,888,812 - TX73_022480 0.14 +0.7 4,888,812 - TX73_022480 0.14 +0.2 4,888,812 - TX73_022480 0.14 -1.1 4,888,852 - TX73_022480 0.19 -0.1 4,888,925 + TX73_022480 0.29 +0.1 4,888,930 - TX73_022480 0.30 +0.5 4,888,958 - TX73_022480 0.33 -0.1 4,889,010 - TX73_022480 0.40 +0.6 4,889,035 - TX73_022480 0.44 +0.5 4,889,042 - TX73_022480 0.45 -0.4 4,889,081 + TX73_022480 0.50 +0.2 4,889,117 + TX73_022480 0.55 -0.2 4,889,127 - TX73_022480 0.56 -0.3 4,889,156 + TX73_022480 0.60 -0.1 4,889,156 + TX73_022480 0.60 +1.2 4,889,156 + TX73_022480 0.60 +0.3 4,889,159 - TX73_022480 0.60 +0.1 4,889,164 - TX73_022480 0.61 +0.1 4,889,164 - TX73_022480 0.61 -0.4 4,889,255 - TX73_022480 0.73 -0.2 4,889,311 + TX73_022480 0.81 -1.6 4,889,315 - TX73_022480 0.81 -0.1 4,889,376 - TX73_022480 0.90 -0.0 4,889,447 + -0.4 4,889,575 - TX73_022485 0.29 -0.5 4,889,850 + TX73_022485 0.69 -0.7 4,889,976 - TX73_022485 0.88 +0.3 4,890,018 + +0.2 4,890,106 + +0.0 4,890,134 - -0.3 4,890,160 - +0.1 4,890,249 - TX73_022490 0.14 -0.2 4,890,299 - TX73_022490 0.20 -0.6 4,890,339 - TX73_022490 0.25 -1.2 4,890,410 + TX73_022490 0.34 +0.3 4,890,418 - TX73_022490 0.35 +0.2 4,890,418 - TX73_022490 0.35 +1.3 4,890,575 - TX73_022490 0.55 -0.8 4,890,582 - TX73_022490 0.56 -0.7 4,890,683 + TX73_022490 0.68 +0.2 4,890,986 + -0.1 4,891,013 - TX73_022495 0.13 -0.8 4,891,041 + TX73_022495 0.17 +0.3
Or see this region's nucleotide sequence