Experiment: ethyl methyl sulfide sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_003675 and TX73_003680 are separated by 549 nucleotides TX73_003680 and TX73_003685 are separated by 26 nucleotides
TX73_003675: TX73_003675 - YbhB/YbcL family Raf kinase inhibitor-like protein, at 781,461 to 781,949
_003675
TX73_003680: TX73_003680 - 5,6-dimethylbenzimidazole synthase, at 782,499 to 783,170
_003680
TX73_003685: TX73_003685 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 783,197 to 784,252
_003685
Position (kb) 782
783
784 Strain fitness (log2 ratio) -2
-1
0
1
2 at 781.518 kb on - strand, within TX73_003675 at 781.520 kb on - strand, within TX73_003675 at 781.525 kb on + strand, within TX73_003675 at 781.525 kb on + strand, within TX73_003675 at 781.533 kb on - strand, within TX73_003675 at 781.547 kb on + strand, within TX73_003675 at 781.548 kb on - strand, within TX73_003675 at 781.560 kb on - strand, within TX73_003675 at 781.562 kb on + strand, within TX73_003675 at 781.570 kb on - strand, within TX73_003675 at 781.602 kb on - strand, within TX73_003675 at 781.618 kb on - strand, within TX73_003675 at 781.623 kb on - strand, within TX73_003675 at 781.626 kb on + strand, within TX73_003675 at 781.641 kb on + strand, within TX73_003675 at 781.659 kb on - strand, within TX73_003675 at 781.666 kb on - strand, within TX73_003675 at 781.666 kb on - strand, within TX73_003675 at 781.666 kb on - strand, within TX73_003675 at 781.670 kb on + strand, within TX73_003675 at 781.696 kb on + strand, within TX73_003675 at 781.696 kb on + strand, within TX73_003675 at 781.696 kb on + strand, within TX73_003675 at 781.707 kb on + strand, within TX73_003675 at 781.737 kb on + strand, within TX73_003675 at 781.739 kb on - strand, within TX73_003675 at 781.745 kb on - strand, within TX73_003675 at 781.753 kb on + strand, within TX73_003675 at 781.753 kb on + strand, within TX73_003675 at 781.883 kb on + strand, within TX73_003675 at 781.883 kb on + strand, within TX73_003675 at 781.886 kb on - strand, within TX73_003675 at 781.901 kb on + strand at 781.901 kb on + strand at 781.909 kb on + strand at 781.909 kb on - strand at 781.913 kb on + strand at 781.917 kb on - strand at 781.935 kb on - strand at 781.959 kb on - strand at 781.967 kb on - strand at 781.967 kb on - strand at 782.018 kb on - strand at 782.071 kb on + strand at 782.075 kb on + strand at 782.112 kb on - strand at 782.112 kb on - strand at 782.124 kb on - strand at 782.133 kb on - strand at 782.137 kb on + strand at 782.144 kb on + strand at 782.203 kb on + strand at 782.203 kb on + strand at 782.218 kb on - strand at 782.239 kb on - strand at 782.244 kb on - strand at 782.246 kb on + strand at 782.251 kb on + strand at 782.254 kb on - strand at 782.255 kb on - strand at 782.260 kb on + strand at 782.263 kb on - strand at 782.265 kb on - strand at 782.265 kb on - strand at 782.268 kb on - strand at 782.327 kb on + strand at 782.327 kb on + strand at 782.335 kb on - strand at 782.335 kb on - strand at 782.336 kb on - strand at 782.336 kb on - strand at 782.373 kb on - strand at 782.384 kb on + strand at 782.390 kb on - strand at 782.392 kb on - strand at 782.458 kb on - strand at 782.503 kb on - strand at 782.503 kb on - strand at 782.507 kb on + strand at 782.513 kb on - strand at 782.530 kb on + strand at 782.538 kb on - strand at 782.539 kb on + strand at 782.558 kb on + strand at 782.566 kb on - strand at 782.566 kb on - strand at 782.566 kb on - strand at 782.574 kb on + strand, within TX73_003680 at 782.598 kb on + strand, within TX73_003680 at 782.620 kb on + strand, within TX73_003680 at 782.636 kb on + strand, within TX73_003680 at 782.644 kb on + strand, within TX73_003680 at 782.644 kb on - strand, within TX73_003680 at 782.669 kb on + strand, within TX73_003680 at 782.676 kb on + strand, within TX73_003680 at 782.676 kb on + strand, within TX73_003680 at 782.707 kb on + strand, within TX73_003680 at 782.716 kb on + strand, within TX73_003680 at 782.724 kb on - strand, within TX73_003680 at 782.745 kb on - strand, within TX73_003680 at 782.758 kb on - strand, within TX73_003680 at 782.768 kb on - strand, within TX73_003680 at 782.783 kb on + strand, within TX73_003680 at 782.786 kb on + strand, within TX73_003680 at 782.786 kb on + strand, within TX73_003680 at 782.808 kb on - strand, within TX73_003680 at 782.823 kb on - strand, within TX73_003680 at 782.833 kb on - strand, within TX73_003680 at 782.845 kb on + strand, within TX73_003680 at 782.845 kb on + strand, within TX73_003680 at 782.851 kb on + strand, within TX73_003680 at 782.859 kb on + strand, within TX73_003680 at 782.890 kb on - strand, within TX73_003680 at 782.898 kb on - strand, within TX73_003680 at 782.923 kb on + strand, within TX73_003680 at 782.951 kb on + strand, within TX73_003680 at 782.956 kb on + strand, within TX73_003680 at 782.974 kb on + strand, within TX73_003680 at 782.974 kb on + strand, within TX73_003680 at 782.982 kb on + strand, within TX73_003680 at 782.998 kb on - strand, within TX73_003680 at 783.005 kb on + strand, within TX73_003680 at 783.005 kb on + strand, within TX73_003680 at 783.005 kb on + strand, within TX73_003680 at 783.012 kb on + strand, within TX73_003680 at 783.013 kb on - strand, within TX73_003680 at 783.013 kb on - strand, within TX73_003680 at 783.013 kb on - strand, within TX73_003680 at 783.013 kb on - strand, within TX73_003680 at 783.023 kb on - strand, within TX73_003680 at 783.032 kb on + strand, within TX73_003680 at 783.040 kb on - strand, within TX73_003680 at 783.052 kb on + strand, within TX73_003680 at 783.052 kb on + strand, within TX73_003680 at 783.060 kb on - strand, within TX73_003680 at 783.060 kb on - strand, within TX73_003680 at 783.169 kb on - strand at 783.178 kb on + strand at 783.178 kb on + strand at 783.186 kb on - strand at 783.186 kb on - strand at 783.186 kb on - strand at 783.203 kb on - strand at 783.204 kb on + strand at 783.248 kb on + strand at 783.248 kb on - strand at 783.271 kb on - strand at 783.310 kb on + strand, within TX73_003685 at 783.310 kb on + strand, within TX73_003685 at 783.336 kb on + strand, within TX73_003685 at 783.336 kb on + strand, within TX73_003685 at 783.372 kb on + strand, within TX73_003685 at 783.399 kb on - strand, within TX73_003685 at 783.399 kb on - strand, within TX73_003685 at 783.431 kb on - strand, within TX73_003685 at 783.431 kb on - strand, within TX73_003685 at 783.454 kb on + strand, within TX73_003685 at 783.456 kb on + strand, within TX73_003685 at 783.461 kb on + strand, within TX73_003685 at 783.463 kb on - strand, within TX73_003685 at 783.476 kb on + strand, within TX73_003685 at 783.484 kb on + strand, within TX73_003685 at 783.484 kb on + strand, within TX73_003685 at 783.489 kb on + strand, within TX73_003685 at 783.491 kb on + strand, within TX73_003685 at 783.491 kb on + strand, within TX73_003685 at 783.491 kb on + strand, within TX73_003685 at 783.496 kb on + strand, within TX73_003685 at 783.499 kb on - strand, within TX73_003685 at 783.499 kb on - strand, within TX73_003685 at 783.499 kb on - strand, within TX73_003685 at 783.499 kb on - strand, within TX73_003685 at 783.499 kb on - strand, within TX73_003685 at 783.499 kb on - strand, within TX73_003685 at 783.499 kb on - strand, within TX73_003685 at 783.501 kb on + strand, within TX73_003685 at 783.504 kb on - strand, within TX73_003685 at 783.504 kb on - strand, within TX73_003685 at 783.534 kb on + strand, within TX73_003685 at 783.602 kb on + strand, within TX73_003685 at 783.610 kb on - strand, within TX73_003685 at 783.623 kb on + strand, within TX73_003685 at 783.623 kb on + strand, within TX73_003685 at 783.631 kb on - strand, within TX73_003685 at 783.631 kb on - strand, within TX73_003685 at 783.631 kb on - strand, within TX73_003685 at 783.633 kb on + strand, within TX73_003685 at 783.647 kb on + strand, within TX73_003685 at 783.647 kb on + strand, within TX73_003685 at 783.661 kb on + strand, within TX73_003685 at 783.661 kb on + strand, within TX73_003685 at 783.669 kb on - strand, within TX73_003685 at 783.669 kb on - strand, within TX73_003685 at 783.669 kb on - strand, within TX73_003685 at 783.672 kb on + strand, within TX73_003685 at 783.705 kb on - strand, within TX73_003685 at 783.736 kb on + strand, within TX73_003685 at 783.736 kb on + strand, within TX73_003685 at 783.736 kb on + strand, within TX73_003685 at 783.736 kb on + strand, within TX73_003685 at 783.736 kb on + strand, within TX73_003685 at 783.744 kb on - strand, within TX73_003685 at 783.769 kb on + strand, within TX73_003685 at 783.782 kb on + strand, within TX73_003685 at 783.782 kb on + strand, within TX73_003685 at 783.787 kb on + strand, within TX73_003685 at 783.790 kb on - strand, within TX73_003685 at 783.798 kb on + strand, within TX73_003685 at 783.839 kb on - strand, within TX73_003685 at 783.845 kb on + strand, within TX73_003685 at 783.853 kb on + strand, within TX73_003685 at 783.861 kb on - strand, within TX73_003685 at 783.876 kb on - strand, within TX73_003685 at 783.876 kb on - strand, within TX73_003685 at 783.954 kb on - strand, within TX73_003685 at 783.974 kb on + strand, within TX73_003685 at 783.974 kb on + strand, within TX73_003685 at 783.982 kb on - strand, within TX73_003685 at 783.983 kb on + strand, within TX73_003685 at 783.983 kb on - strand, within TX73_003685 at 783.987 kb on - strand, within TX73_003685 at 783.992 kb on + strand, within TX73_003685 at 784.033 kb on + strand, within TX73_003685 at 784.033 kb on + strand, within TX73_003685 at 784.052 kb on + strand, within TX73_003685 at 784.055 kb on + strand, within TX73_003685 at 784.060 kb on - strand, within TX73_003685 at 784.061 kb on - strand, within TX73_003685 at 784.078 kb on - strand, within TX73_003685 at 784.087 kb on - strand, within TX73_003685 at 784.092 kb on - strand, within TX73_003685 at 784.114 kb on - strand, within TX73_003685 at 784.122 kb on + strand, within TX73_003685 at 784.122 kb on + strand, within TX73_003685 at 784.149 kb on + strand at 784.154 kb on + strand at 784.161 kb on + strand at 784.163 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ethyl methyl sulfide sulfur source remove 781,518 - TX73_003675 0.12 -0.1 781,520 - TX73_003675 0.12 -0.7 781,525 + TX73_003675 0.13 +0.9 781,525 + TX73_003675 0.13 +1.6 781,533 - TX73_003675 0.15 +0.0 781,547 + TX73_003675 0.18 -0.9 781,548 - TX73_003675 0.18 +0.4 781,560 - TX73_003675 0.20 -0.6 781,562 + TX73_003675 0.21 +0.1 781,570 - TX73_003675 0.22 +0.3 781,602 - TX73_003675 0.29 +0.7 781,618 - TX73_003675 0.32 +0.2 781,623 - TX73_003675 0.33 +0.6 781,626 + TX73_003675 0.34 +0.3 781,641 + TX73_003675 0.37 -0.3 781,659 - TX73_003675 0.40 -0.1 781,666 - TX73_003675 0.42 -0.5 781,666 - TX73_003675 0.42 -1.4 781,666 - TX73_003675 0.42 +0.6 781,670 + TX73_003675 0.43 -0.4 781,696 + TX73_003675 0.48 +0.2 781,696 + TX73_003675 0.48 -0.0 781,696 + TX73_003675 0.48 -1.1 781,707 + TX73_003675 0.50 -1.6 781,737 + TX73_003675 0.56 +0.2 781,739 - TX73_003675 0.57 +0.3 781,745 - TX73_003675 0.58 -0.3 781,753 + TX73_003675 0.60 -1.0 781,753 + TX73_003675 0.60 -0.1 781,883 + TX73_003675 0.86 +0.9 781,883 + TX73_003675 0.86 +0.1 781,886 - TX73_003675 0.87 -0.2 781,901 + -0.2 781,901 + +0.7 781,909 + +0.1 781,909 - +0.4 781,913 + +0.4 781,917 - +0.3 781,935 - +0.3 781,959 - -0.4 781,967 - +0.0 781,967 - -0.2 782,018 - +0.4 782,071 + +0.1 782,075 + -0.1 782,112 - -0.3 782,112 - +0.8 782,124 - -0.0 782,133 - -0.2 782,137 + +1.0 782,144 + +0.2 782,203 + +0.8 782,203 + -0.0 782,218 - +0.7 782,239 - -0.2 782,244 - -0.6 782,246 + -1.2 782,251 + -0.7 782,254 - +0.2 782,255 - +0.2 782,260 + +0.3 782,263 - -0.2 782,265 - -0.7 782,265 - -0.1 782,268 - -0.2 782,327 + -0.1 782,327 + +0.9 782,335 - -0.1 782,335 - +0.8 782,336 - +0.1 782,336 - -0.3 782,373 - -0.2 782,384 + +0.4 782,390 - +0.0 782,392 - +0.9 782,458 - -0.1 782,503 - -0.4 782,503 - -1.3 782,507 + -1.5 782,513 - +0.4 782,530 + -0.2 782,538 - +0.2 782,539 + +0.1 782,558 + -0.1 782,566 - +0.1 782,566 - +0.4 782,566 - -0.2 782,574 + TX73_003680 0.11 +0.7 782,598 + TX73_003680 0.15 +0.5 782,620 + TX73_003680 0.18 +0.0 782,636 + TX73_003680 0.20 +0.4 782,644 + TX73_003680 0.22 +1.0 782,644 - TX73_003680 0.22 -0.8 782,669 + TX73_003680 0.25 -0.2 782,676 + TX73_003680 0.26 -0.1 782,676 + TX73_003680 0.26 +0.9 782,707 + TX73_003680 0.31 +0.0 782,716 + TX73_003680 0.32 +0.2 782,724 - TX73_003680 0.33 +0.6 782,745 - TX73_003680 0.37 +0.6 782,758 - TX73_003680 0.39 +0.8 782,768 - TX73_003680 0.40 -0.2 782,783 + TX73_003680 0.42 +0.0 782,786 + TX73_003680 0.43 -0.8 782,786 + TX73_003680 0.43 +0.2 782,808 - TX73_003680 0.46 +0.3 782,823 - TX73_003680 0.48 -0.8 782,833 - TX73_003680 0.50 +0.6 782,845 + TX73_003680 0.51 -0.3 782,845 + TX73_003680 0.51 +0.0 782,851 + TX73_003680 0.52 -0.6 782,859 + TX73_003680 0.54 +0.2 782,890 - TX73_003680 0.58 -0.3 782,898 - TX73_003680 0.59 -0.5 782,923 + TX73_003680 0.63 -0.0 782,951 + TX73_003680 0.67 -0.6 782,956 + TX73_003680 0.68 +0.2 782,974 + TX73_003680 0.71 +0.1 782,974 + TX73_003680 0.71 -0.2 782,982 + TX73_003680 0.72 +1.1 782,998 - TX73_003680 0.74 +0.6 783,005 + TX73_003680 0.75 +0.5 783,005 + TX73_003680 0.75 +0.1 783,005 + TX73_003680 0.75 +0.2 783,012 + TX73_003680 0.76 +0.1 783,013 - TX73_003680 0.76 +0.4 783,013 - TX73_003680 0.76 +0.6 783,013 - TX73_003680 0.76 -0.2 783,013 - TX73_003680 0.76 -0.2 783,023 - TX73_003680 0.78 -1.0 783,032 + TX73_003680 0.79 +0.4 783,040 - TX73_003680 0.81 +0.3 783,052 + TX73_003680 0.82 -0.2 783,052 + TX73_003680 0.82 -0.5 783,060 - TX73_003680 0.83 +0.5 783,060 - TX73_003680 0.83 +0.8 783,169 - -0.1 783,178 + +0.5 783,178 + +0.2 783,186 - +0.0 783,186 - +0.6 783,186 - -0.4 783,203 - -0.3 783,204 + +0.4 783,248 + +0.7 783,248 - +0.6 783,271 - -0.5 783,310 + TX73_003685 0.11 -0.2 783,310 + TX73_003685 0.11 +0.5 783,336 + TX73_003685 0.13 +0.3 783,336 + TX73_003685 0.13 +0.3 783,372 + TX73_003685 0.17 -0.7 783,399 - TX73_003685 0.19 +0.8 783,399 - TX73_003685 0.19 -1.7 783,431 - TX73_003685 0.22 +0.1 783,431 - TX73_003685 0.22 -0.8 783,454 + TX73_003685 0.24 +0.2 783,456 + TX73_003685 0.25 +0.3 783,461 + TX73_003685 0.25 +0.7 783,463 - TX73_003685 0.25 +0.1 783,476 + TX73_003685 0.26 +0.6 783,484 + TX73_003685 0.27 -0.4 783,484 + TX73_003685 0.27 +0.5 783,489 + TX73_003685 0.28 -0.3 783,491 + TX73_003685 0.28 +0.2 783,491 + TX73_003685 0.28 +1.0 783,491 + TX73_003685 0.28 +0.0 783,496 + TX73_003685 0.28 +0.5 783,499 - TX73_003685 0.29 -1.2 783,499 - TX73_003685 0.29 -0.1 783,499 - TX73_003685 0.29 -0.2 783,499 - TX73_003685 0.29 -0.0 783,499 - TX73_003685 0.29 -0.7 783,499 - TX73_003685 0.29 +0.6 783,499 - TX73_003685 0.29 -0.6 783,501 + TX73_003685 0.29 +0.6 783,504 - TX73_003685 0.29 -0.2 783,504 - TX73_003685 0.29 -0.3 783,534 + TX73_003685 0.32 -1.3 783,602 + TX73_003685 0.38 -0.1 783,610 - TX73_003685 0.39 +0.8 783,623 + TX73_003685 0.40 +0.4 783,623 + TX73_003685 0.40 +0.2 783,631 - TX73_003685 0.41 -0.1 783,631 - TX73_003685 0.41 -0.1 783,631 - TX73_003685 0.41 -0.5 783,633 + TX73_003685 0.41 +0.5 783,647 + TX73_003685 0.43 -0.9 783,647 + TX73_003685 0.43 -0.4 783,661 + TX73_003685 0.44 -1.4 783,661 + TX73_003685 0.44 +0.6 783,669 - TX73_003685 0.45 +0.2 783,669 - TX73_003685 0.45 +0.6 783,669 - TX73_003685 0.45 -1.0 783,672 + TX73_003685 0.45 -0.3 783,705 - TX73_003685 0.48 -0.1 783,736 + TX73_003685 0.51 -0.1 783,736 + TX73_003685 0.51 +0.7 783,736 + TX73_003685 0.51 -0.4 783,736 + TX73_003685 0.51 +0.4 783,736 + TX73_003685 0.51 -0.9 783,744 - TX73_003685 0.52 -0.1 783,769 + TX73_003685 0.54 -1.1 783,782 + TX73_003685 0.55 +2.0 783,782 + TX73_003685 0.55 +1.7 783,787 + TX73_003685 0.56 +0.2 783,790 - TX73_003685 0.56 -0.7 783,798 + TX73_003685 0.57 +0.0 783,839 - TX73_003685 0.61 +0.0 783,845 + TX73_003685 0.61 -0.2 783,853 + TX73_003685 0.62 -0.4 783,861 - TX73_003685 0.63 +1.2 783,876 - TX73_003685 0.64 -0.4 783,876 - TX73_003685 0.64 +0.2 783,954 - TX73_003685 0.72 +0.1 783,974 + TX73_003685 0.74 +0.3 783,974 + TX73_003685 0.74 -2.1 783,982 - TX73_003685 0.74 -0.1 783,983 + TX73_003685 0.74 +0.4 783,983 - TX73_003685 0.74 -0.0 783,987 - TX73_003685 0.75 +0.1 783,992 + TX73_003685 0.75 +0.4 784,033 + TX73_003685 0.79 -0.2 784,033 + TX73_003685 0.79 +0.1 784,052 + TX73_003685 0.81 -0.0 784,055 + TX73_003685 0.81 -0.6 784,060 - TX73_003685 0.82 +0.3 784,061 - TX73_003685 0.82 +1.0 784,078 - TX73_003685 0.83 +0.7 784,087 - TX73_003685 0.84 -0.8 784,092 - TX73_003685 0.85 -0.1 784,114 - TX73_003685 0.87 +0.3 784,122 + TX73_003685 0.88 +0.1 784,122 + TX73_003685 0.88 -0.8 784,149 + -0.5 784,154 + +1.7 784,161 + +0.2 784,163 + -0.0
Or see this region's nucleotide sequence