Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_015915

Experiment: ethyl methyl sulfide sulfur source

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ethyl methyl sulfide sulfur source
3,480,977	+				+1.0
3,480,985	+				-0.9
3,481,012	-				-0.3
3,481,020	-				-0.8
3,481,032	-				-0.6
3,481,062	-				-1.7
3,481,062	-				+0.3
3,481,064	+				+0.1
3,481,083	+				+0.1
3,481,083	+				-0.0
3,481,089	+				+0.1
3,481,089	+				-1.1
3,481,091	-				-0.6
3,481,097	-				-0.0
3,481,123	+				-1.0
3,481,130	-				+0.6
3,481,158	+				+0.5
3,481,178	+				+0.7
3,481,210	+				+0.1
3,481,218	+				+0.0
3,481,221	-				+0.1
3,481,226	-				+0.2
3,481,226	-				-0.1
3,481,226	-				-0.0
3,481,230	+				-0.1
3,481,233	+				+0.1
3,481,315	+		TX73_015910	0.47	-0.1
3,481,317	-		TX73_015910	0.48	-0.4
3,481,334	+		TX73_015910	0.57	+0.1
3,481,337	-		TX73_015910	0.58	-0.2
3,481,342	-		TX73_015910	0.60	-0.7
3,481,342	-		TX73_015910	0.60	-1.1
3,481,342	-		TX73_015910	0.60	+0.1
3,481,358	+		TX73_015910	0.68	-0.3
3,481,359	+		TX73_015910	0.69	-0.7
3,481,359	+		TX73_015910	0.69	+0.7
3,481,362	-		TX73_015910	0.70	+0.8
3,481,367	-		TX73_015910	0.72	+0.1
3,481,367	-		TX73_015910	0.72	+0.8
3,481,369	+		TX73_015910	0.73	+0.7
3,481,375	+		TX73_015910	0.76	+1.0
3,481,389	+		TX73_015910	0.83	+0.1
3,481,397	-		TX73_015910	0.87	-0.0
3,481,410	-				+0.4
3,481,412	+				+0.3
3,481,420	-				-0.0
3,481,420	-				-0.5
3,481,424	+				-0.8
3,481,449	-				+0.0
3,481,492	-				-0.1
3,481,508	-				-0.3
3,481,516	-				+0.5
3,481,528	-				-0.4
3,481,532	+				-0.1
3,481,542	-		TX73_015915	0.11	+0.6
3,481,545	-		TX73_015915	0.11	+0.2
3,481,545	-		TX73_015915	0.11	-0.2
3,481,552	+		TX73_015915	0.12	+0.1
3,481,565	-		TX73_015915	0.13	-0.8
3,481,565	-		TX73_015915	0.13	-0.6
3,481,583	+		TX73_015915	0.14	+0.8
3,481,594	+		TX73_015915	0.15	+0.6
3,481,604	+		TX73_015915	0.16	+0.3
3,481,604	+		TX73_015915	0.16	-0.5
3,481,604	+		TX73_015915	0.16	+0.4
3,481,605	+		TX73_015915	0.16	-0.5
3,481,607	-		TX73_015915	0.16	+0.4
3,481,612	-		TX73_015915	0.17	-1.4
3,481,612	-		TX73_015915	0.17	-0.1
3,481,626	-		TX73_015915	0.18	-0.3
3,481,630	+		TX73_015915	0.18	-0.0
3,481,662	-		TX73_015915	0.21	+0.2
3,481,695	+		TX73_015915	0.24	-1.4
3,481,714	+		TX73_015915	0.25	-0.0
3,481,725	-		TX73_015915	0.26	-0.1
3,481,744	+		TX73_015915	0.28	-2.4
3,481,744	+		TX73_015915	0.28	-0.5
3,481,761	+		TX73_015915	0.29	-0.3
3,481,772	+		TX73_015915	0.30	-0.1
3,481,772	+		TX73_015915	0.30	-0.4
3,481,773	+		TX73_015915	0.30	+0.2
3,481,773	+		TX73_015915	0.30	+0.2
3,481,773	+		TX73_015915	0.30	-1.7
3,481,773	+		TX73_015915	0.30	-0.3
3,481,773	+		TX73_015915	0.30	+0.1
3,481,775	+		TX73_015915	0.30	-0.2
3,481,780	-		TX73_015915	0.31	-0.5
3,481,780	-		TX73_015915	0.31	+0.6
3,481,780	-		TX73_015915	0.31	+0.4
3,481,780	-		TX73_015915	0.31	-0.1
3,481,780	-		TX73_015915	0.31	-0.3
3,481,780	-		TX73_015915	0.31	+0.4
3,481,781	-		TX73_015915	0.31	+0.0
3,481,781	-		TX73_015915	0.31	+0.6
3,481,781	-		TX73_015915	0.31	+1.0
3,481,781	-		TX73_015915	0.31	-0.1
3,481,781	-		TX73_015915	0.31	+0.3
3,481,781	-		TX73_015915	0.31	-0.8
3,481,781	-		TX73_015915	0.31	-0.5
3,481,807	+		TX73_015915	0.33	-0.1
3,481,810	+		TX73_015915	0.33	-0.1
3,481,813	-		TX73_015915	0.34	-0.3
3,481,813	-		TX73_015915	0.34	-0.2
3,481,815	-		TX73_015915	0.34	+0.0
3,481,819	-		TX73_015915	0.34	+0.1
3,481,827	-		TX73_015915	0.35	+0.1
3,481,838	+		TX73_015915	0.36	-0.6
3,481,841	-		TX73_015915	0.36	-0.4
3,481,857	+		TX73_015915	0.37	-0.6
3,481,865	-		TX73_015915	0.38	+0.3
3,481,865	-		TX73_015915	0.38	+0.1
3,481,884	+		TX73_015915	0.40	-0.6
3,481,889	+		TX73_015915	0.40	-1.1
3,481,894	+		TX73_015915	0.41	-0.1
3,481,961	-		TX73_015915	0.46	-0.9
3,481,963	-		TX73_015915	0.46	-0.4
3,481,963	-		TX73_015915	0.46	+0.5
3,481,981	+		TX73_015915	0.48	-0.5
3,481,981	+		TX73_015915	0.48	-0.6
3,481,982	-		TX73_015915	0.48	+0.1
3,482,010	-		TX73_015915	0.50	+0.6
3,482,017	+		TX73_015915	0.51	-0.4
3,482,025	+		TX73_015915	0.52	-0.3
3,482,025	+		TX73_015915	0.52	-0.6
3,482,033	-		TX73_015915	0.52	+0.6
3,482,033	-		TX73_015915	0.52	+0.1
3,482,036	+		TX73_015915	0.53	-0.6
3,482,036	+		TX73_015915	0.53	-0.8
3,482,036	+		TX73_015915	0.53	-0.1
3,482,036	+		TX73_015915	0.53	-1.0
3,482,041	+		TX73_015915	0.53	-0.2
3,482,041	+		TX73_015915	0.53	-1.4
3,482,044	-		TX73_015915	0.53	-0.3
3,482,055	+		TX73_015915	0.54	+0.2
3,482,063	-		TX73_015915	0.55	+0.3
3,482,086	-		TX73_015915	0.57	-0.5
3,482,101	-		TX73_015915	0.58	+0.0
3,482,102	-		TX73_015915	0.58	-0.2
3,482,116	-		TX73_015915	0.59	-0.1
3,482,137	-		TX73_015915	0.61	+0.4
3,482,137	-		TX73_015915	0.61	+0.1
3,482,150	+		TX73_015915	0.62	-0.3
3,482,150	+		TX73_015915	0.62	-0.0
3,482,150	+		TX73_015915	0.62	-0.8
3,482,151	+		TX73_015915	0.62	-1.0
3,482,158	-		TX73_015915	0.63	-0.8
3,482,158	-		TX73_015915	0.63	-1.0
3,482,203	-		TX73_015915	0.67	+0.1
3,482,215	+		TX73_015915	0.68	+0.3
3,482,221	-		TX73_015915	0.68	+0.2
3,482,274	+		TX73_015915	0.73	-0.7
3,482,275	+		TX73_015915	0.73	-0.9
3,482,275	+		TX73_015915	0.73	-0.1
3,482,277	-		TX73_015915	0.73	+0.3
3,482,283	-		TX73_015915	0.74	-0.9
3,482,345	-		TX73_015915	0.79	+0.4
3,482,365	+		TX73_015915	0.80	+0.4
3,482,370	-		TX73_015915	0.81	+0.3
3,482,394	+		TX73_015915	0.83	-0.5
3,482,402	-		TX73_015915	0.84	+0.1
3,482,427	-		TX73_015915	0.86	-0.0
3,482,436	-		TX73_015915	0.87	+0.2
3,482,443	+		TX73_015915	0.87	+0.2
3,482,469	+		TX73_015915	0.89	-0.6
3,482,482	-				-0.9
3,482,484	+				-1.3
3,482,484	-				-0.0
3,482,491	+				+1.7
3,482,491	+				-0.7
3,482,491	+				+0.1
3,482,491	+				-0.1
3,482,491	+				-0.2
3,482,492	-				+0.2
3,482,499	-				-0.8
3,482,499	-				+0.3
3,482,499	-				+0.0
3,482,499	-				-0.7
3,482,499	-				-0.5
3,482,512	+				+0.4
3,482,514	-				+0.6
3,482,520	-				-0.3
3,482,520	-				+0.3
3,482,544	-				+0.3
3,483,534	+				+0.8
3,483,534	+				+0.1