Experiment: 2-(Methylthio)ethanol sulfur source
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_007200 and TX73_007205 are separated by 263 nucleotides TX73_007205 and TX73_007210 overlap by 1 nucleotides
TX73_007200: TX73_007200 - type 1 glutamine amidotransferase, at 1,550,580 to 1,551,407
_007200
TX73_007205: TX73_007205 - allophanate hydrolase, at 1,551,671 to 1,553,494
_007205
TX73_007210: TX73_007210 - urea carboxylase, at 1,553,494 to 1,557,042
_007210
Position (kb)
1551
1552
1553
1554 Strain fitness (log2 ratio)
-1
0
1
2 at 1550.685 kb on - strand, within TX73_007200 at 1550.722 kb on - strand, within TX73_007200 at 1550.798 kb on - strand, within TX73_007200 at 1550.881 kb on - strand, within TX73_007200 at 1550.887 kb on + strand, within TX73_007200 at 1550.895 kb on - strand, within TX73_007200 at 1550.897 kb on + strand, within TX73_007200 at 1551.056 kb on + strand, within TX73_007200 at 1551.064 kb on - strand, within TX73_007200 at 1551.146 kb on + strand, within TX73_007200 at 1551.182 kb on + strand, within TX73_007200 at 1551.185 kb on - strand, within TX73_007200 at 1551.188 kb on - strand, within TX73_007200 at 1551.221 kb on - strand, within TX73_007200 at 1551.426 kb on + strand at 1551.434 kb on - strand at 1551.524 kb on + strand at 1551.599 kb on - strand at 1551.600 kb on - strand at 1551.634 kb on + strand at 1551.634 kb on + strand at 1551.660 kb on - strand at 1551.910 kb on + strand, within TX73_007205 at 1551.915 kb on + strand, within TX73_007205 at 1551.923 kb on - strand, within TX73_007205 at 1552.006 kb on + strand, within TX73_007205 at 1552.033 kb on + strand, within TX73_007205 at 1552.036 kb on - strand, within TX73_007205 at 1552.048 kb on + strand, within TX73_007205 at 1552.105 kb on - strand, within TX73_007205 at 1552.201 kb on + strand, within TX73_007205 at 1552.259 kb on - strand, within TX73_007205 at 1552.261 kb on + strand, within TX73_007205 at 1552.261 kb on + strand, within TX73_007205 at 1552.270 kb on + strand, within TX73_007205 at 1552.366 kb on + strand, within TX73_007205 at 1552.367 kb on + strand, within TX73_007205 at 1552.383 kb on - strand, within TX73_007205 at 1552.385 kb on + strand, within TX73_007205 at 1552.385 kb on + strand, within TX73_007205 at 1552.385 kb on + strand, within TX73_007205 at 1552.393 kb on - strand, within TX73_007205 at 1552.417 kb on - strand, within TX73_007205 at 1552.454 kb on + strand, within TX73_007205 at 1552.481 kb on - strand, within TX73_007205 at 1552.536 kb on + strand, within TX73_007205 at 1552.589 kb on + strand, within TX73_007205 at 1552.589 kb on + strand, within TX73_007205 at 1552.603 kb on + strand, within TX73_007205 at 1552.625 kb on + strand, within TX73_007205 at 1552.715 kb on - strand, within TX73_007205 at 1552.880 kb on + strand, within TX73_007205 at 1552.900 kb on + strand, within TX73_007205 at 1552.935 kb on + strand, within TX73_007205 at 1553.004 kb on - strand, within TX73_007205 at 1553.011 kb on - strand, within TX73_007205 at 1553.085 kb on - strand, within TX73_007205 at 1553.127 kb on + strand, within TX73_007205 at 1553.127 kb on + strand, within TX73_007205 at 1553.510 kb on + strand at 1553.562 kb on - strand at 1553.658 kb on + strand at 1553.666 kb on - strand at 1553.671 kb on + strand at 1553.753 kb on + strand at 1553.761 kb on - strand at 1553.763 kb on + strand at 1553.771 kb on + strand at 1553.771 kb on + strand at 1553.848 kb on + strand at 1553.848 kb on + strand at 1553.849 kb on - strand, within TX73_007210 at 1553.856 kb on - strand, within TX73_007210 at 1553.881 kb on - strand, within TX73_007210 at 1553.981 kb on + strand, within TX73_007210 at 1554.018 kb on + strand, within TX73_007210 at 1554.023 kb on + strand, within TX73_007210 at 1554.023 kb on + strand, within TX73_007210 at 1554.031 kb on - strand, within TX73_007210 at 1554.089 kb on - strand, within TX73_007210 at 1554.178 kb on - strand, within TX73_007210 at 1554.210 kb on + strand, within TX73_007210 at 1554.399 kb on - strand, within TX73_007210 at 1554.413 kb on + strand, within TX73_007210 at 1554.450 kb on - strand, within TX73_007210 at 1554.485 kb on + strand, within TX73_007210 at 1554.485 kb on + strand, within TX73_007210 at 1554.493 kb on - strand, within TX73_007210
Per-strain Table
Position Strand Gene LocusTag Fraction 2-(Methylthio)ethanol sulfur source remove 1,550,685 - TX73_007200 0.13 -0.2 1,550,722 - TX73_007200 0.17 +0.6 1,550,798 - TX73_007200 0.26 +0.6 1,550,881 - TX73_007200 0.36 +0.1 1,550,887 + TX73_007200 0.37 +0.7 1,550,895 - TX73_007200 0.38 +0.4 1,550,897 + TX73_007200 0.38 +2.2 1,551,056 + TX73_007200 0.57 +0.2 1,551,064 - TX73_007200 0.58 +0.1 1,551,146 + TX73_007200 0.68 +1.6 1,551,182 + TX73_007200 0.73 -0.5 1,551,185 - TX73_007200 0.73 -0.9 1,551,188 - TX73_007200 0.73 -0.7 1,551,221 - TX73_007200 0.77 +0.4 1,551,426 + +0.0 1,551,434 - -0.3 1,551,524 + -0.0 1,551,599 - +0.0 1,551,600 - +0.2 1,551,634 + -0.7 1,551,634 + -0.5 1,551,660 - +0.3 1,551,910 + TX73_007205 0.13 +0.0 1,551,915 + TX73_007205 0.13 -0.6 1,551,923 - TX73_007205 0.14 +0.5 1,552,006 + TX73_007205 0.18 +1.9 1,552,033 + TX73_007205 0.20 -0.8 1,552,036 - TX73_007205 0.20 +0.4 1,552,048 + TX73_007205 0.21 +0.4 1,552,105 - TX73_007205 0.24 +0.1 1,552,201 + TX73_007205 0.29 -0.2 1,552,259 - TX73_007205 0.32 +0.7 1,552,261 + TX73_007205 0.32 +1.3 1,552,261 + TX73_007205 0.32 +0.5 1,552,270 + TX73_007205 0.33 +0.6 1,552,366 + TX73_007205 0.38 +0.2 1,552,367 + TX73_007205 0.38 -0.5 1,552,383 - TX73_007205 0.39 +1.4 1,552,385 + TX73_007205 0.39 +0.6 1,552,385 + TX73_007205 0.39 +0.3 1,552,385 + TX73_007205 0.39 +0.4 1,552,393 - TX73_007205 0.40 +0.1 1,552,417 - TX73_007205 0.41 +0.8 1,552,454 + TX73_007205 0.43 +0.0 1,552,481 - TX73_007205 0.44 +0.1 1,552,536 + TX73_007205 0.47 -1.1 1,552,589 + TX73_007205 0.50 -0.0 1,552,589 + TX73_007205 0.50 +0.4 1,552,603 + TX73_007205 0.51 +0.2 1,552,625 + TX73_007205 0.52 -0.2 1,552,715 - TX73_007205 0.57 -0.5 1,552,880 + TX73_007205 0.66 -0.3 1,552,900 + TX73_007205 0.67 +0.3 1,552,935 + TX73_007205 0.69 +0.8 1,553,004 - TX73_007205 0.73 -0.2 1,553,011 - TX73_007205 0.73 +1.0 1,553,085 - TX73_007205 0.78 +0.4 1,553,127 + TX73_007205 0.80 +0.1 1,553,127 + TX73_007205 0.80 +0.7 1,553,510 + -0.1 1,553,562 - +0.4 1,553,658 + +0.7 1,553,666 - +0.2 1,553,671 + +0.0 1,553,753 + +0.7 1,553,761 - -0.7 1,553,763 + -0.2 1,553,771 + -0.2 1,553,771 + -1.2 1,553,848 + -0.6 1,553,848 + -0.1 1,553,849 - TX73_007210 0.10 +0.9 1,553,856 - TX73_007210 0.10 -0.0 1,553,881 - TX73_007210 0.11 +0.5 1,553,981 + TX73_007210 0.14 +0.4 1,554,018 + TX73_007210 0.15 -0.3 1,554,023 + TX73_007210 0.15 +0.4 1,554,023 + TX73_007210 0.15 +1.1 1,554,031 - TX73_007210 0.15 +0.1 1,554,089 - TX73_007210 0.17 +0.4 1,554,178 - TX73_007210 0.19 +0.1 1,554,210 + TX73_007210 0.20 +0.5 1,554,399 - TX73_007210 0.26 +0.7 1,554,413 + TX73_007210 0.26 -0.4 1,554,450 - TX73_007210 0.27 -0.8 1,554,485 + TX73_007210 0.28 -0.6 1,554,485 + TX73_007210 0.28 -0.2 1,554,493 - TX73_007210 0.28 -0.9
Or see this region's nucleotide sequence