Experiment: sulfur source control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_018440 and TX73_018445 overlap by 4 nucleotides TX73_018445 and TX73_018450 are separated by 141 nucleotides
TX73_018440: TX73_018440 - permease, at 4,024,303 to 4,025,352
_018440
TX73_018445: TX73_018445 - metalloregulator ArsR/SmtB family transcription factor, at 4,025,349 to 4,025,648
_018445
TX73_018450: TX73_018450 - sulfite exporter TauE/SafE family protein, at 4,025,790 to 4,026,575
_018450
Position (kb)
4025
4026 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4024.395 kb on - strand at 4024.408 kb on + strand, within TX73_018440 at 4024.491 kb on - strand, within TX73_018440 at 4024.511 kb on - strand, within TX73_018440 at 4024.570 kb on - strand, within TX73_018440 at 4024.572 kb on - strand, within TX73_018440 at 4024.572 kb on - strand, within TX73_018440 at 4024.585 kb on - strand, within TX73_018440 at 4024.594 kb on + strand, within TX73_018440 at 4024.658 kb on + strand, within TX73_018440 at 4024.666 kb on - strand, within TX73_018440 at 4024.705 kb on + strand, within TX73_018440 at 4024.710 kb on + strand, within TX73_018440 at 4024.734 kb on - strand, within TX73_018440 at 4024.795 kb on - strand, within TX73_018440 at 4024.812 kb on + strand, within TX73_018440 at 4024.812 kb on - strand, within TX73_018440 at 4024.850 kb on + strand, within TX73_018440 at 4024.912 kb on + strand, within TX73_018440 at 4024.915 kb on - strand, within TX73_018440 at 4024.920 kb on - strand, within TX73_018440 at 4024.951 kb on + strand, within TX73_018440 at 4025.047 kb on + strand, within TX73_018440 at 4025.054 kb on + strand, within TX73_018440 at 4025.093 kb on + strand, within TX73_018440 at 4025.138 kb on - strand, within TX73_018440 at 4025.154 kb on + strand, within TX73_018440 at 4025.154 kb on + strand, within TX73_018440 at 4025.154 kb on + strand, within TX73_018440 at 4025.258 kb on + strand at 4025.265 kb on + strand at 4025.265 kb on + strand at 4025.270 kb on + strand at 4025.270 kb on + strand at 4025.273 kb on - strand at 4025.304 kb on + strand at 4025.312 kb on - strand at 4025.333 kb on + strand at 4025.350 kb on + strand at 4025.392 kb on + strand, within TX73_018445 at 4025.392 kb on + strand, within TX73_018445 at 4025.392 kb on + strand, within TX73_018445 at 4025.400 kb on - strand, within TX73_018445 at 4025.431 kb on - strand, within TX73_018445 at 4025.431 kb on - strand, within TX73_018445 at 4025.475 kb on - strand, within TX73_018445 at 4025.559 kb on + strand, within TX73_018445 at 4025.641 kb on - strand at 4025.782 kb on + strand at 4025.826 kb on + strand at 4025.841 kb on + strand at 4025.947 kb on + strand, within TX73_018450 at 4026.014 kb on + strand, within TX73_018450 at 4026.036 kb on - strand, within TX73_018450 at 4026.043 kb on + strand, within TX73_018450 at 4026.043 kb on + strand, within TX73_018450 at 4026.049 kb on - strand, within TX73_018450 at 4026.051 kb on - strand, within TX73_018450 at 4026.139 kb on - strand, within TX73_018450 at 4026.150 kb on - strand, within TX73_018450 at 4026.152 kb on + strand, within TX73_018450 at 4026.160 kb on - strand, within TX73_018450 at 4026.186 kb on + strand, within TX73_018450 at 4026.194 kb on - strand, within TX73_018450 at 4026.216 kb on + strand, within TX73_018450 at 4026.241 kb on + strand, within TX73_018450 at 4026.285 kb on + strand, within TX73_018450 at 4026.289 kb on - strand, within TX73_018450 at 4026.313 kb on - strand, within TX73_018450 at 4026.313 kb on - strand, within TX73_018450 at 4026.346 kb on + strand, within TX73_018450 at 4026.373 kb on + strand, within TX73_018450 at 4026.383 kb on + strand, within TX73_018450 at 4026.391 kb on - strand, within TX73_018450 at 4026.401 kb on - strand, within TX73_018450 at 4026.401 kb on - strand, within TX73_018450 at 4026.408 kb on - strand, within TX73_018450 at 4026.422 kb on - strand, within TX73_018450 at 4026.432 kb on + strand, within TX73_018450 at 4026.445 kb on - strand, within TX73_018450 at 4026.464 kb on - strand, within TX73_018450 at 4026.475 kb on + strand, within TX73_018450 at 4026.485 kb on + strand, within TX73_018450 at 4026.485 kb on + strand, within TX73_018450 at 4026.502 kb on + strand at 4026.502 kb on - strand at 4026.520 kb on - strand at 4026.541 kb on - strand at 4026.549 kb on + strand at 4026.560 kb on + strand at 4026.570 kb on + strand at 4026.573 kb on - strand at 4026.578 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction sulfur source control remove 4,024,395 - +1.1 4,024,408 + TX73_018440 0.10 +0.4 4,024,491 - TX73_018440 0.18 +0.0 4,024,511 - TX73_018440 0.20 -0.6 4,024,570 - TX73_018440 0.25 +0.0 4,024,572 - TX73_018440 0.26 +0.7 4,024,572 - TX73_018440 0.26 +0.6 4,024,585 - TX73_018440 0.27 -1.0 4,024,594 + TX73_018440 0.28 -0.3 4,024,658 + TX73_018440 0.34 +0.0 4,024,666 - TX73_018440 0.35 +0.2 4,024,705 + TX73_018440 0.38 +0.2 4,024,710 + TX73_018440 0.39 -0.4 4,024,734 - TX73_018440 0.41 -0.5 4,024,795 - TX73_018440 0.47 -0.0 4,024,812 + TX73_018440 0.48 +0.3 4,024,812 - TX73_018440 0.48 -0.3 4,024,850 + TX73_018440 0.52 +0.8 4,024,912 + TX73_018440 0.58 +0.4 4,024,915 - TX73_018440 0.58 -0.4 4,024,920 - TX73_018440 0.59 -0.8 4,024,951 + TX73_018440 0.62 +1.1 4,025,047 + TX73_018440 0.71 +1.1 4,025,054 + TX73_018440 0.72 -1.2 4,025,093 + TX73_018440 0.75 +0.7 4,025,138 - TX73_018440 0.80 +0.3 4,025,154 + TX73_018440 0.81 +0.4 4,025,154 + TX73_018440 0.81 -0.6 4,025,154 + TX73_018440 0.81 +0.8 4,025,258 + -0.9 4,025,265 + +0.7 4,025,265 + -0.8 4,025,270 + +0.7 4,025,270 + +0.4 4,025,273 - -0.9 4,025,304 + -0.1 4,025,312 - -0.1 4,025,333 + +0.6 4,025,350 + +0.3 4,025,392 + TX73_018445 0.14 -1.3 4,025,392 + TX73_018445 0.14 -1.1 4,025,392 + TX73_018445 0.14 +0.2 4,025,400 - TX73_018445 0.17 +0.6 4,025,431 - TX73_018445 0.27 -0.7 4,025,431 - TX73_018445 0.27 -1.0 4,025,475 - TX73_018445 0.42 -0.2 4,025,559 + TX73_018445 0.70 -0.7 4,025,641 - +0.4 4,025,782 + +0.6 4,025,826 + +0.5 4,025,841 + -1.0 4,025,947 + TX73_018450 0.20 -0.0 4,026,014 + TX73_018450 0.28 -3.3 4,026,036 - TX73_018450 0.31 -0.1 4,026,043 + TX73_018450 0.32 +1.1 4,026,043 + TX73_018450 0.32 +0.3 4,026,049 - TX73_018450 0.33 +0.1 4,026,051 - TX73_018450 0.33 +0.8 4,026,139 - TX73_018450 0.44 +0.6 4,026,150 - TX73_018450 0.46 -0.7 4,026,152 + TX73_018450 0.46 +0.1 4,026,160 - TX73_018450 0.47 +1.5 4,026,186 + TX73_018450 0.50 -2.2 4,026,194 - TX73_018450 0.51 -0.2 4,026,216 + TX73_018450 0.54 -0.4 4,026,241 + TX73_018450 0.57 +0.4 4,026,285 + TX73_018450 0.63 +0.1 4,026,289 - TX73_018450 0.63 +0.1 4,026,313 - TX73_018450 0.67 -3.0 4,026,313 - TX73_018450 0.67 +1.0 4,026,346 + TX73_018450 0.71 -0.7 4,026,373 + TX73_018450 0.74 -0.8 4,026,383 + TX73_018450 0.75 +1.6 4,026,391 - TX73_018450 0.76 +0.1 4,026,401 - TX73_018450 0.78 -2.4 4,026,401 - TX73_018450 0.78 -0.1 4,026,408 - TX73_018450 0.79 +0.5 4,026,422 - TX73_018450 0.80 +1.2 4,026,432 + TX73_018450 0.82 +0.2 4,026,445 - TX73_018450 0.83 +0.0 4,026,464 - TX73_018450 0.86 +0.4 4,026,475 + TX73_018450 0.87 +0.6 4,026,485 + TX73_018450 0.88 -0.2 4,026,485 + TX73_018450 0.88 -0.4 4,026,502 + +0.2 4,026,502 - +0.8 4,026,520 - +1.4 4,026,541 - +0.1 4,026,549 + -0.0 4,026,560 + +0.1 4,026,570 + +1.2 4,026,573 - -0.4 4,026,578 - -0.4
Or see this region's nucleotide sequence