Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_016260

Experiment: sulfur source control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sulfur source control
3,547,873	-		TX73_016250	0.38	-0.9
3,547,875	+		TX73_016250	0.38	+0.8
3,547,875	+		TX73_016250	0.38	+0.5
3,547,875	+		TX73_016250	0.38	+0.2
3,547,883	-		TX73_016250	0.39	-0.3
3,548,012	+		TX73_016250	0.57	-0.7
3,548,012	-		TX73_016250	0.57	+0.5
3,548,097	-		TX73_016250	0.68	-0.8
3,548,108	-		TX73_016250	0.69	-0.1
3,548,119	+		TX73_016250	0.71	+0.2
3,548,124	+		TX73_016250	0.72	-0.1
3,548,127	-		TX73_016250	0.72	+0.1
3,548,128	+		TX73_016250	0.72	-1.1
3,548,136	-		TX73_016250	0.73	-2.7
3,548,144	+		TX73_016250	0.74	+0.8
3,548,144	+		TX73_016250	0.74	+0.7
3,548,144	+		TX73_016250	0.74	-0.1
3,548,144	+		TX73_016250	0.74	-0.3
3,548,149	+		TX73_016250	0.75	+1.6
3,548,149	+		TX73_016250	0.75	+0.0
3,548,149	+		TX73_016250	0.75	-0.5
3,548,149	+		TX73_016250	0.75	-0.0
3,548,149	+		TX73_016250	0.75	-0.1
3,548,149	+		TX73_016250	0.75	+0.1
3,548,149	+		TX73_016250	0.75	-0.5
3,548,149	+		TX73_016250	0.75	+0.1
3,548,149	+		TX73_016250	0.75	-0.1
3,548,149	+		TX73_016250	0.75	+0.7
3,548,152	-		TX73_016250	0.75	-0.3
3,548,152	-		TX73_016250	0.75	+0.4
3,548,152	-		TX73_016250	0.75	+0.1
3,548,152	-		TX73_016250	0.75	-1.1
3,548,157	-		TX73_016250	0.76	+0.5
3,548,157	-		TX73_016250	0.76	+0.1
3,548,157	-		TX73_016250	0.76	+0.1
3,548,164	+		TX73_016250	0.77	+0.4
3,548,172	-		TX73_016250	0.78	+0.4
3,548,225	+		TX73_016250	0.85	-0.1
3,548,235	+		TX73_016250	0.87	-2.4
3,548,241	-		TX73_016250	0.87	-0.7
3,548,289	+				-0.6
3,548,290	+				+0.4
3,548,294	+				+0.1
3,548,294	+				+0.3
3,548,297	-				+0.6
3,548,297	-				-0.4
3,548,299	+				-0.2
3,548,340	+				+0.2
3,548,356	+				+0.5
3,548,356	+				+0.3
3,548,356	+				+0.3
3,548,364	-				+0.3
3,548,377	-				-0.4
3,548,401	-				+0.1
3,548,401	-				-0.3
3,548,419	-				+0.6
3,548,479	+				-0.7
3,548,484	-				+0.1
3,548,506	+				+0.3
3,548,530	-		TX73_016255	0.12	-0.7
3,548,570	-		TX73_016255	0.23	-0.9
3,548,584	+		TX73_016255	0.27	-1.9
3,548,614	-		TX73_016255	0.35	+0.0
3,548,631	+		TX73_016255	0.40	-0.1
3,548,631	+		TX73_016255	0.40	+0.5
3,548,631	+		TX73_016255	0.40	-0.2
3,548,631	+		TX73_016255	0.40	-0.6
3,548,633	+		TX73_016255	0.41	-0.6
3,548,639	-		TX73_016255	0.42	-0.1
3,548,639	-		TX73_016255	0.42	-0.2
3,548,649	-		TX73_016255	0.45	-0.0
3,548,699	-		TX73_016255	0.59	-0.2
3,548,721	+		TX73_016255	0.65	+0.0
3,548,721	+		TX73_016255	0.65	-0.3
3,548,721	+		TX73_016255	0.65	-2.9
3,548,729	-		TX73_016255	0.67	+0.6
3,548,765	-		TX73_016255	0.77	+0.8
3,548,800	+		TX73_016255	0.87	-0.2
3,548,848	-				-0.9
3,548,848	-				+0.6
3,548,880	+				-0.5
3,548,890	+				+0.3
3,548,903	+				-0.1
3,548,962	-				+0.2
3,548,999	+		TX73_016260	0.13	-0.9
3,548,999	+		TX73_016260	0.13	+1.3
3,548,999	+		TX73_016260	0.13	+0.3
3,549,004	+		TX73_016260	0.14	-0.6
3,549,009	+		TX73_016260	0.14	-1.1
3,549,009	+		TX73_016260	0.14	-1.5
3,549,017	-		TX73_016260	0.15	+0.0
3,549,043	-		TX73_016260	0.17	-0.4
3,549,062	+		TX73_016260	0.19	-0.4
3,549,110	+		TX73_016260	0.24	-0.3
3,549,110	+		TX73_016260	0.24	-0.3
3,549,110	+		TX73_016260	0.24	-1.7
3,549,110	+		TX73_016260	0.24	-1.8
3,549,110	+		TX73_016260	0.24	+0.6
3,549,118	-		TX73_016260	0.25	-0.2
3,549,118	-		TX73_016260	0.25	-0.4
3,549,118	-		TX73_016260	0.25	-1.5
3,549,118	-		TX73_016260	0.25	-0.5
3,549,118	-		TX73_016260	0.25	-1.3
3,549,152	-		TX73_016260	0.28	+0.3
3,549,165	+		TX73_016260	0.29	+0.1
3,549,176	+		TX73_016260	0.30	-0.4
3,549,176	+		TX73_016260	0.30	+0.3
3,549,184	-		TX73_016260	0.31	-0.6
3,549,184	-		TX73_016260	0.31	-0.6
3,549,184	-		TX73_016260	0.31	-0.3
3,549,184	-		TX73_016260	0.31	+0.3
3,549,186	-		TX73_016260	0.31	+0.5
3,549,215	+		TX73_016260	0.34	-1.7
3,549,217	-		TX73_016260	0.34	-0.8
3,549,221	+		TX73_016260	0.35	+0.6
3,549,223	-		TX73_016260	0.35	-1.1
3,549,223	-		TX73_016260	0.35	-1.0
3,549,242	+		TX73_016260	0.37	-0.1
3,549,259	+		TX73_016260	0.38	-0.5
3,549,262	-		TX73_016260	0.39	+0.2
3,549,267	-		TX73_016260	0.39	-0.6
3,549,267	-		TX73_016260	0.39	+2.4
3,549,267	-		TX73_016260	0.39	+0.2
3,549,337	+		TX73_016260	0.46	+0.3
3,549,337	+		TX73_016260	0.46	-0.7
3,549,339	+		TX73_016260	0.46	+0.4
3,549,389	-		TX73_016260	0.51	+0.5
3,549,391	+		TX73_016260	0.51	-0.0
3,549,411	-		TX73_016260	0.53	-0.8
3,549,418	-		TX73_016260	0.54	+0.7
3,549,447	-		TX73_016260	0.57	+0.0
3,549,452	-		TX73_016260	0.57	+0.0
3,549,491	+		TX73_016260	0.61	-0.6
3,549,516	-		TX73_016260	0.63	-0.4
3,549,534	+		TX73_016260	0.65	+0.1
3,549,665	+		TX73_016260	0.78	-2.1
3,549,671	-		TX73_016260	0.78	+0.6
3,549,704	+		TX73_016260	0.81	-0.5
3,549,721	-		TX73_016260	0.83	+0.1
3,549,722	-		TX73_016260	0.83	-1.3
3,549,723	+		TX73_016260	0.83	-0.3
3,549,731	+		TX73_016260	0.84	+0.4
3,549,731	+		TX73_016260	0.84	-0.7
3,549,744	-		TX73_016260	0.85	-0.3
3,549,744	-		TX73_016260	0.85	+0.4
3,549,750	-		TX73_016260	0.86	+0.4
3,549,768	+		TX73_016260	0.88	+0.1
3,549,768	+		TX73_016260	0.88	-0.1
3,549,768	-		TX73_016260	0.88	-0.8
3,549,776	-		TX73_016260	0.88	+0.7
3,549,800	+				-0.6
3,549,808	-				-0.4
3,549,808	-				+0.5
3,549,864	+				-0.5
3,549,904	+				-0.6
3,549,914	+				-0.2
3,549,928	-				+0.4
3,549,987	+				-1.1
3,549,990	-				-1.0
3,549,990	-				-0.1
3,550,019	+				+0.3
3,550,027	-				+0.0
3,550,027	-				+0.9
3,550,029	+				-2.0
3,550,029	+				+1.0
3,550,037	-				-0.3
3,550,077	-				+0.1
3,550,159	-				-0.3
3,550,170	+				-0.5
3,550,170	+				-0.5
3,550,219	-				-0.1
3,550,255	-				-0.2
3,550,279	+				+0.1
3,550,327	+				+0.5
3,550,350	-				+0.8
3,550,363	+				-0.3
3,550,376	-				+1.0
3,550,376	-				-0.1
3,550,376	-				+1.4
3,550,380	+				-0.5
3,550,381	-				+0.8
3,550,381	-				-0.2
3,550,415	-				-0.2
3,550,433	-				-0.5
3,550,439	-				+0.6
3,550,439	-				-0.3
3,550,439	-				+0.2
3,550,444	-				+0.5
3,550,453	+				+0.8
3,550,461	-				+0.4
3,550,466	-				-1.8
3,550,467	+				-2.2
3,550,467	+				+0.6
3,550,467	+				+1.1
3,550,480	-				-0.3
3,550,480	-				+0.3
3,550,484	+				-0.5
3,550,484	+				+0.5
3,550,492	-		TX73_016265	0.10	+0.2
3,550,523	-		TX73_016265	0.11	+1.1
3,550,540	+		TX73_016265	0.12	-0.2
3,550,544	-		TX73_016265	0.12	-0.5
3,550,564	-		TX73_016265	0.13	-0.7
3,550,619	+		TX73_016265	0.16	+0.0
3,550,634	+		TX73_016265	0.17	-1.4
3,550,635	+		TX73_016265	0.17	+0.1
3,550,653	+		TX73_016265	0.18	-0.5
3,550,653	+		TX73_016265	0.18	+0.3
3,550,653	+		TX73_016265	0.18	-1.3
3,550,653	+		TX73_016265	0.18	+0.3
3,550,653	+		TX73_016265	0.18	+0.0
3,550,653	+		TX73_016265	0.18	+0.6
3,550,653	+		TX73_016265	0.18	+0.8
3,550,653	+		TX73_016265	0.18	-0.5
3,550,653	+		TX73_016265	0.18	-0.2
3,550,656	-		TX73_016265	0.18	-0.1
3,550,661	-		TX73_016265	0.18	+0.9
3,550,661	-		TX73_016265	0.18	+0.5
3,550,661	-		TX73_016265	0.18	-0.1
3,550,661	-		TX73_016265	0.18	+0.4
3,550,661	-		TX73_016265	0.18	-2.1
3,550,678	+		TX73_016265	0.19	-1.4
3,550,687	-		TX73_016265	0.19	+0.2
3,550,725	+		TX73_016265	0.21	-0.0
3,550,725	+		TX73_016265	0.21	-0.2
3,550,725	+		TX73_016265	0.21	-0.0
3,550,730	+		TX73_016265	0.21	+0.1
3,550,733	-		TX73_016265	0.21	-0.4
3,550,735	+		TX73_016265	0.22	-0.7
3,550,738	-		TX73_016265	0.22	+0.9
3,550,844	+		TX73_016265	0.27	-0.7
3,550,844	+		TX73_016265	0.27	-0.5
3,550,844	+		TX73_016265	0.27	-0.2
3,550,844	+		TX73_016265	0.27	-1.3
3,550,844	+		TX73_016265	0.27	+0.7
3,550,844	+		TX73_016265	0.27	+0.1
3,550,852	-		TX73_016265	0.27	+0.5
3,550,852	-		TX73_016265	0.27	-0.0
3,550,852	-		TX73_016265	0.27	-0.1
3,550,852	-		TX73_016265	0.27	-1.0
3,550,859	+		TX73_016265	0.27	-0.1
3,550,859	+		TX73_016265	0.27	+0.6
3,550,866	-		TX73_016265	0.28	-0.0
3,550,866	-		TX73_016265	0.28	-0.3