Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_024585

Experiment: Sebacic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Sebacic (C); anaerobic
5,342,039	+		TX73_024580	0.48	+0.1
5,342,047	-		TX73_024580	0.49	-0.9
5,342,068	+		TX73_024580	0.50	+0.4
5,342,071	-		TX73_024580	0.50	+0.2
5,342,071	-		TX73_024580	0.50	+0.5
5,342,071	-		TX73_024580	0.50	+0.6
5,342,129	-		TX73_024580	0.54	-1.1
5,342,129	-		TX73_024580	0.54	-0.3
5,342,129	-		TX73_024580	0.54	-0.7
5,342,140	-		TX73_024580	0.54	+1.0
5,342,140	-		TX73_024580	0.54	-0.3
5,342,159	+		TX73_024580	0.55	-1.1
5,342,159	+		TX73_024580	0.55	-1.2
5,342,167	-		TX73_024580	0.56	+1.0
5,342,213	+		TX73_024580	0.59	-0.8
5,342,234	-		TX73_024580	0.60	-0.2
5,342,236	+		TX73_024580	0.60	-0.5
5,342,237	+		TX73_024580	0.60	-0.8
5,342,245	-		TX73_024580	0.61	+0.4
5,342,282	-		TX73_024580	0.63	+0.4
5,342,320	-		TX73_024580	0.65	+1.8
5,342,328	+		TX73_024580	0.66	+2.2
5,342,347	+		TX73_024580	0.67	-0.2
5,342,357	+		TX73_024580	0.68	-0.0
5,342,357	+		TX73_024580	0.68	-0.2
5,342,357	+		TX73_024580	0.68	+0.3
5,342,357	+		TX73_024580	0.68	+0.4
5,342,360	-		TX73_024580	0.68	+0.7
5,342,365	-		TX73_024580	0.68	+0.1
5,342,365	-		TX73_024580	0.68	-0.5
5,342,426	+		TX73_024580	0.72	+1.8
5,342,434	-		TX73_024580	0.72	-0.6
5,342,444	-		TX73_024580	0.73	-0.0
5,342,459	-		TX73_024580	0.74	-0.0
5,342,511	+		TX73_024580	0.77	-0.4
5,342,519	-		TX73_024580	0.78	-1.4
5,342,525	-		TX73_024580	0.78	-0.1
5,342,540	-		TX73_024580	0.79	+1.7
5,342,578	+		TX73_024580	0.81	+0.2
5,342,620	-		TX73_024580	0.84	+0.5
5,342,637	-		TX73_024580	0.85	+0.5
5,342,710	-		TX73_024580	0.90	+0.5
5,342,741	-				+0.6
5,342,750	-				-0.4
5,342,785	+				-0.6
5,342,785	+				-0.4
5,342,790	+				-0.7
5,342,798	-				-0.0
5,342,870	+				-0.2
5,342,878	+				+0.1
5,342,881	-				+1.0
5,342,881	-				-0.0
5,342,911	+				-0.0
5,342,911	+				+0.7
5,342,911	+				-0.9
5,342,919	-				+1.0
5,342,919	-				+0.9
5,342,928	+				+0.2
5,342,934	-				-0.2
5,342,954	-				-0.7
5,342,967	+				+0.7
5,342,975	-				+0.4
5,342,982	+				-0.0
5,342,990	-				-0.2
5,342,990	-				+0.2
5,342,990	-				+0.5
5,342,993	+				-0.2
5,343,025	+				-0.8
5,343,042	+				-0.3
5,343,047	+				-0.5
5,343,047	+				+0.8
5,343,050	-				-0.7
5,343,060	-				+1.1
5,343,060	-				-0.2
5,343,095	+				-0.6
5,343,120	-				+0.3
5,343,125	-				-0.4
5,343,141	-				-0.1
5,343,163	+		TX73_024585	0.11	-0.2
5,343,177	-		TX73_024585	0.13	+0.7
5,343,190	+		TX73_024585	0.14	+0.6
5,343,196	-		TX73_024585	0.14	+0.7
5,343,200	+		TX73_024585	0.14	-0.1
5,343,209	-		TX73_024585	0.15	+0.0
5,343,232	+		TX73_024585	0.17	-1.3
5,343,263	-		TX73_024585	0.20	-0.4
5,343,265	-		TX73_024585	0.20	-0.5
5,343,281	-		TX73_024585	0.21	-0.7
5,343,289	+		TX73_024585	0.22	-0.2
5,343,295	+		TX73_024585	0.22	+0.2
5,343,297	-		TX73_024585	0.23	-1.1
5,343,323	+		TX73_024585	0.25	+0.9
5,343,352	-		TX73_024585	0.27	+0.1
5,343,360	+		TX73_024585	0.28	-0.1
5,343,376	+		TX73_024585	0.29	-0.5
5,343,376	+		TX73_024585	0.29	-0.9
5,343,376	+		TX73_024585	0.29	+0.9
5,343,376	+		TX73_024585	0.29	-1.7
5,343,376	+		TX73_024585	0.29	-0.3
5,343,381	+		TX73_024585	0.30	-0.0
5,343,382	-		TX73_024585	0.30	+0.2
5,343,384	-		TX73_024585	0.30	-0.4
5,343,384	-		TX73_024585	0.30	-0.1
5,343,384	-		TX73_024585	0.30	-0.3
5,343,384	-		TX73_024585	0.30	+0.8
5,343,384	-		TX73_024585	0.30	-1.4
5,343,395	+		TX73_024585	0.31	-0.8
5,343,403	-		TX73_024585	0.31	-1.2
5,343,403	-		TX73_024585	0.31	-0.9
5,343,412	-		TX73_024585	0.32	-1.0
5,343,416	-		TX73_024585	0.33	+0.3
5,343,427	-		TX73_024585	0.34	+1.2
5,343,427	-		TX73_024585	0.34	-0.7
5,343,447	-		TX73_024585	0.35	-0.2
5,343,447	-		TX73_024585	0.35	-0.4
5,343,497	-		TX73_024585	0.39	-1.1
5,343,519	-		TX73_024585	0.41	+0.8
5,343,529	+		TX73_024585	0.42	+0.4
5,343,529	-		TX73_024585	0.42	-0.8
5,343,567	+		TX73_024585	0.45	-1.7
5,343,593	-		TX73_024585	0.47	-0.4
5,343,608	+		TX73_024585	0.49	+1.2
5,343,619	+		TX73_024585	0.50	-0.7
5,343,627	-		TX73_024585	0.50	-0.2
5,343,635	+		TX73_024585	0.51	-1.5
5,343,635	+		TX73_024585	0.51	-1.3
5,343,635	+		TX73_024585	0.51	+0.1
5,343,635	+		TX73_024585	0.51	+1.2
5,343,643	-		TX73_024585	0.52	+0.5
5,343,650	-		TX73_024585	0.52	-1.2
5,343,712	+		TX73_024585	0.57	+0.1
5,343,722	+		TX73_024585	0.58	+0.1
5,343,731	-		TX73_024585	0.59	+0.2
5,343,752	-		TX73_024585	0.61	+0.7
5,343,758	+		TX73_024585	0.61	-1.0
5,343,802	+		TX73_024585	0.65	+0.3
5,343,810	-		TX73_024585	0.66	+0.3
5,343,856	+		TX73_024585	0.69	+0.3
5,343,856	+		TX73_024585	0.69	+0.2
5,343,864	-		TX73_024585	0.70	+0.0
5,343,864	-		TX73_024585	0.70	-0.6
5,343,864	-		TX73_024585	0.70	-0.1
5,343,864	-		TX73_024585	0.70	-0.5
5,343,873	+		TX73_024585	0.71	-0.5
5,343,873	+		TX73_024585	0.71	-0.1
5,343,885	+		TX73_024585	0.72	+0.2
5,343,891	-		TX73_024585	0.72	-0.2
5,343,931	+		TX73_024585	0.76	-0.9
5,343,947	-		TX73_024585	0.77	-0.3
5,343,947	-		TX73_024585	0.77	+0.2
5,343,951	+		TX73_024585	0.77	-0.3
5,343,961	-		TX73_024585	0.78	-0.5
5,344,032	+		TX73_024585	0.84	-2.1
5,344,051	-		TX73_024585	0.86	-0.3
5,344,108	-				+0.1
5,344,123	-				+0.5
5,344,132	+				+0.2
5,344,140	-				+0.0
5,344,140	-				-0.3
5,344,140	-				+0.5
5,344,140	-				-1.3
5,344,175	+				-0.1
5,344,175	+				+0.3
5,344,175	+				+0.0
5,344,176	-				-0.4
5,344,178	-				-0.4
5,344,227	+				+0.2
5,344,229	+				+0.1
5,344,237	-				+0.3
5,344,237	-				+0.7
5,344,237	-				+0.5
5,344,269	+				+0.3
5,344,301	-				-0.5
5,344,322	+				+0.1
5,344,331	-				+0.4
5,344,351	-				+1.2
5,344,351	-				+0.5
5,344,351	-				-0.1
5,344,396	-				-0.2
5,344,432	-				-1.4
5,344,439	+		TX73_024590	0.10	-1.3
5,344,439	+		TX73_024590	0.10	-0.4
5,344,440	-		TX73_024590	0.10	+0.6
5,344,447	-		TX73_024590	0.11	+0.8
5,344,452	+		TX73_024590	0.12	+0.1
5,344,465	+		TX73_024590	0.15	-1.4
5,344,481	+		TX73_024590	0.17	-0.4
5,344,525	+		TX73_024590	0.25	-0.6
5,344,550	+		TX73_024590	0.29	+0.2
5,344,558	-		TX73_024590	0.31	-0.8
5,344,564	+		TX73_024590	0.32	-0.0
5,344,568	-		TX73_024590	0.32	+0.7
5,344,572	+		TX73_024590	0.33	-0.5
5,344,572	+		TX73_024590	0.33	-0.3
5,344,572	-		TX73_024590	0.33	-0.2
5,344,585	-		TX73_024590	0.35	+0.5
5,344,595	+		TX73_024590	0.37	-0.2
5,344,604	+		TX73_024590	0.39	+0.2
5,344,622	+		TX73_024590	0.42	-0.4
5,344,627	+		TX73_024590	0.42	-0.6
5,344,669	-		TX73_024590	0.50	+0.1
5,344,671	+		TX73_024590	0.50	+1.2
5,344,671	+		TX73_024590	0.50	+0.6
5,344,673	+		TX73_024590	0.50	-0.1
5,344,717	-		TX73_024590	0.58	-0.5
5,344,724	-		TX73_024590	0.59	+0.5
5,344,746	+		TX73_024590	0.63	+0.6
5,344,749	-		TX73_024590	0.64	+0.7
5,344,754	-		TX73_024590	0.64	+0.8
5,344,754	-		TX73_024590	0.64	-0.0
5,344,791	+		TX73_024590	0.71	+0.7
5,344,791	+		TX73_024590	0.71	+0.2
5,344,791	+		TX73_024590	0.71	+0.1
5,344,791	+		TX73_024590	0.71	+0.8
5,344,799	-		TX73_024590	0.72	-1.9
5,344,799	-		TX73_024590	0.72	-0.8
5,344,799	-		TX73_024590	0.72	-0.5
5,344,804	-		TX73_024590	0.73	+1.2
5,344,814	-		TX73_024590	0.75	-0.1
5,344,825	+		TX73_024590	0.77	+0.6
5,344,825	+		TX73_024590	0.77	-0.0
5,344,825	+		TX73_024590	0.77	+0.3
5,344,830	+		TX73_024590	0.78	+0.2
5,344,833	-		TX73_024590	0.78	+2.8
5,344,833	-		TX73_024590	0.78	+0.2
5,344,833	-		TX73_024590	0.78	+0.0
5,344,835	+		TX73_024590	0.78	+0.5
5,344,835	+		TX73_024590	0.78	-0.2
5,344,836	+		TX73_024590	0.79	-0.4
5,344,848	-		TX73_024590	0.81	-0.6
5,344,893	-		TX73_024590	0.88	-1.0
5,344,903	-				-1.8
5,344,903	-				-1.6
5,344,930	-				+0.2
5,344,964	+				-0.1
5,344,972	-				-0.3
5,344,972	-				+0.4
5,345,046	-				-0.5
5,345,046	-				+0.5
5,345,053	+				-0.3
5,345,062	+		TX73_024595	0.11	-0.4
5,345,062	+		TX73_024595	0.11	+0.1