Experiment: Sebacic (C); anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_014270 and TX73_014275 are separated by 65 nucleotides TX73_014275 and TX73_014280 are separated by 361 nucleotides
TX73_014270: TX73_014270 - polysaccharide deacetylase family protein, at 3,127,398 to 3,128,450
_014270
TX73_014275: TX73_014275 - DNA starvation/stationary phase protection protein, at 3,128,516 to 3,128,998
_014275
TX73_014280: TX73_014280 - hypothetical protein, at 3,129,360 to 3,130,286
_014280
Position (kb)
3128
3129 Strain fitness (log2 ratio)
-1
0
1
2 at 3127.528 kb on + strand, within TX73_014270 at 3127.546 kb on - strand, within TX73_014270 at 3127.561 kb on + strand, within TX73_014270 at 3127.599 kb on + strand, within TX73_014270 at 3127.628 kb on - strand, within TX73_014270 at 3127.630 kb on - strand, within TX73_014270 at 3127.717 kb on - strand, within TX73_014270 at 3127.719 kb on - strand, within TX73_014270 at 3127.753 kb on - strand, within TX73_014270 at 3127.811 kb on - strand, within TX73_014270 at 3127.940 kb on + strand, within TX73_014270 at 3127.993 kb on - strand, within TX73_014270 at 3128.039 kb on - strand, within TX73_014270 at 3128.099 kb on + strand, within TX73_014270 at 3128.157 kb on + strand, within TX73_014270 at 3128.159 kb on - strand, within TX73_014270 at 3128.164 kb on - strand, within TX73_014270 at 3128.164 kb on - strand, within TX73_014270 at 3128.164 kb on - strand, within TX73_014270 at 3128.230 kb on + strand, within TX73_014270 at 3128.255 kb on + strand, within TX73_014270 at 3128.263 kb on - strand, within TX73_014270 at 3128.263 kb on - strand, within TX73_014270 at 3128.263 kb on - strand, within TX73_014270 at 3128.263 kb on - strand, within TX73_014270 at 3128.263 kb on - strand, within TX73_014270 at 3128.279 kb on + strand, within TX73_014270 at 3128.344 kb on - strand, within TX73_014270 at 3128.346 kb on + strand at 3128.385 kb on - strand at 3128.386 kb on - strand at 3128.386 kb on - strand at 3128.395 kb on - strand at 3128.396 kb on - strand at 3128.398 kb on + strand at 3128.402 kb on + strand at 3128.420 kb on + strand at 3128.420 kb on + strand at 3128.427 kb on + strand at 3128.427 kb on + strand at 3128.442 kb on - strand at 3128.448 kb on - strand at 3128.473 kb on + strand at 3128.537 kb on - strand at 3128.547 kb on - strand at 3128.583 kb on - strand, within TX73_014275 at 3128.589 kb on + strand, within TX73_014275 at 3128.589 kb on + strand, within TX73_014275 at 3128.601 kb on + strand, within TX73_014275 at 3128.618 kb on - strand, within TX73_014275 at 3128.627 kb on - strand, within TX73_014275 at 3128.684 kb on + strand, within TX73_014275 at 3128.691 kb on + strand, within TX73_014275 at 3128.691 kb on + strand, within TX73_014275 at 3128.694 kb on - strand, within TX73_014275 at 3128.699 kb on - strand, within TX73_014275 at 3128.699 kb on - strand, within TX73_014275 at 3128.699 kb on - strand, within TX73_014275 at 3128.699 kb on - strand, within TX73_014275 at 3128.740 kb on + strand, within TX73_014275 at 3128.785 kb on - strand, within TX73_014275 at 3128.805 kb on + strand, within TX73_014275 at 3128.805 kb on + strand, within TX73_014275 at 3128.805 kb on + strand, within TX73_014275 at 3128.805 kb on + strand, within TX73_014275 at 3128.817 kb on + strand, within TX73_014275 at 3128.819 kb on + strand, within TX73_014275 at 3128.819 kb on + strand, within TX73_014275 at 3128.820 kb on - strand, within TX73_014275 at 3128.847 kb on + strand, within TX73_014275 at 3128.900 kb on - strand, within TX73_014275 at 3128.904 kb on + strand, within TX73_014275 at 3128.927 kb on + strand, within TX73_014275 at 3128.935 kb on - strand, within TX73_014275 at 3128.966 kb on - strand at 3128.988 kb on + strand at 3128.999 kb on + strand at 3129.012 kb on - strand at 3129.014 kb on - strand at 3129.045 kb on - strand at 3129.264 kb on + strand at 3129.264 kb on + strand at 3129.380 kb on + strand at 3129.383 kb on - strand at 3129.399 kb on + strand at 3129.463 kb on + strand, within TX73_014280 at 3129.537 kb on + strand, within TX73_014280 at 3129.537 kb on + strand, within TX73_014280 at 3129.641 kb on + strand, within TX73_014280 at 3129.699 kb on + strand, within TX73_014280 at 3129.704 kb on + strand, within TX73_014280 at 3129.704 kb on + strand, within TX73_014280 at 3129.707 kb on - strand, within TX73_014280 at 3129.788 kb on - strand, within TX73_014280 at 3129.808 kb on + strand, within TX73_014280 at 3129.816 kb on - strand, within TX73_014280 at 3129.816 kb on - strand, within TX73_014280 at 3129.816 kb on - strand, within TX73_014280 at 3129.872 kb on + strand, within TX73_014280 at 3129.917 kb on - strand, within TX73_014280 at 3129.941 kb on + strand, within TX73_014280
Per-strain Table
Position Strand Gene LocusTag Fraction Sebacic (C); anaerobic remove 3,127,528 + TX73_014270 0.12 +0.2 3,127,546 - TX73_014270 0.14 -0.0 3,127,561 + TX73_014270 0.15 +0.1 3,127,599 + TX73_014270 0.19 +0.3 3,127,628 - TX73_014270 0.22 +0.5 3,127,630 - TX73_014270 0.22 +0.7 3,127,717 - TX73_014270 0.30 -1.0 3,127,719 - TX73_014270 0.30 +1.0 3,127,753 - TX73_014270 0.34 -0.3 3,127,811 - TX73_014270 0.39 +0.2 3,127,940 + TX73_014270 0.51 +0.5 3,127,993 - TX73_014270 0.57 -0.2 3,128,039 - TX73_014270 0.61 -0.2 3,128,099 + TX73_014270 0.67 -0.1 3,128,157 + TX73_014270 0.72 +0.3 3,128,159 - TX73_014270 0.72 +2.2 3,128,164 - TX73_014270 0.73 +1.3 3,128,164 - TX73_014270 0.73 +0.9 3,128,164 - TX73_014270 0.73 -0.2 3,128,230 + TX73_014270 0.79 -0.2 3,128,255 + TX73_014270 0.81 -0.6 3,128,263 - TX73_014270 0.82 +0.9 3,128,263 - TX73_014270 0.82 +0.0 3,128,263 - TX73_014270 0.82 +0.9 3,128,263 - TX73_014270 0.82 -0.3 3,128,263 - TX73_014270 0.82 +1.4 3,128,279 + TX73_014270 0.84 +0.3 3,128,344 - TX73_014270 0.90 -0.8 3,128,346 + -0.2 3,128,385 - +1.0 3,128,386 - +0.2 3,128,386 - +0.8 3,128,395 - -0.5 3,128,396 - -1.2 3,128,398 + +0.1 3,128,402 + -0.3 3,128,420 + -0.4 3,128,420 + +0.1 3,128,427 + -1.1 3,128,427 + +0.9 3,128,442 - +0.8 3,128,448 - +0.1 3,128,473 + +0.4 3,128,537 - +0.2 3,128,547 - +0.2 3,128,583 - TX73_014275 0.14 -0.1 3,128,589 + TX73_014275 0.15 +0.5 3,128,589 + TX73_014275 0.15 +0.2 3,128,601 + TX73_014275 0.18 +0.3 3,128,618 - TX73_014275 0.21 +0.4 3,128,627 - TX73_014275 0.23 -0.3 3,128,684 + TX73_014275 0.35 -0.8 3,128,691 + TX73_014275 0.36 +0.1 3,128,691 + TX73_014275 0.36 -0.0 3,128,694 - TX73_014275 0.37 -0.6 3,128,699 - TX73_014275 0.38 -0.4 3,128,699 - TX73_014275 0.38 +0.4 3,128,699 - TX73_014275 0.38 -0.3 3,128,699 - TX73_014275 0.38 +1.3 3,128,740 + TX73_014275 0.46 +0.8 3,128,785 - TX73_014275 0.56 -0.5 3,128,805 + TX73_014275 0.60 +0.9 3,128,805 + TX73_014275 0.60 +0.0 3,128,805 + TX73_014275 0.60 +0.9 3,128,805 + TX73_014275 0.60 +0.8 3,128,817 + TX73_014275 0.62 +0.1 3,128,819 + TX73_014275 0.63 +0.5 3,128,819 + TX73_014275 0.63 -0.6 3,128,820 - TX73_014275 0.63 +0.5 3,128,847 + TX73_014275 0.69 +1.2 3,128,900 - TX73_014275 0.80 +0.3 3,128,904 + TX73_014275 0.80 +0.2 3,128,927 + TX73_014275 0.85 +0.3 3,128,935 - TX73_014275 0.87 -0.1 3,128,966 - -0.5 3,128,988 + -0.5 3,128,999 + +0.6 3,129,012 - +0.3 3,129,014 - +0.9 3,129,045 - +0.1 3,129,264 + -1.6 3,129,264 + +0.1 3,129,380 + -0.2 3,129,383 - +0.1 3,129,399 + -0.5 3,129,463 + TX73_014280 0.11 +0.7 3,129,537 + TX73_014280 0.19 -0.9 3,129,537 + TX73_014280 0.19 -0.1 3,129,641 + TX73_014280 0.30 +0.4 3,129,699 + TX73_014280 0.37 -0.7 3,129,704 + TX73_014280 0.37 +0.7 3,129,704 + TX73_014280 0.37 +0.1 3,129,707 - TX73_014280 0.37 +0.2 3,129,788 - TX73_014280 0.46 +0.4 3,129,808 + TX73_014280 0.48 -0.5 3,129,816 - TX73_014280 0.49 +1.1 3,129,816 - TX73_014280 0.49 +0.7 3,129,816 - TX73_014280 0.49 -1.3 3,129,872 + TX73_014280 0.55 +0.2 3,129,917 - TX73_014280 0.60 +0.3 3,129,941 + TX73_014280 0.63 +0.9
Or see this region's nucleotide sequence