Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_012695

Experiment: Pimelic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pimelic (C); anaerobic
2,788,330	-				-0.0
2,788,351	+				+0.9
2,788,366	+				+0.2
2,788,374	-				-0.3
2,788,394	+				-1.2
2,788,395	+				+1.1
2,788,425	+		TX73_012690	0.13	-0.3
2,788,426	+		TX73_012690	0.13	+0.6
2,788,428	-		TX73_012690	0.13	+0.3
2,788,448	-		TX73_012690	0.15	+0.1
2,788,477	+		TX73_012690	0.19	+0.2
2,788,477	+		TX73_012690	0.19	-0.1
2,788,485	-		TX73_012690	0.20	-0.1
2,788,544	+		TX73_012690	0.26	+0.6
2,788,552	-		TX73_012690	0.27	+0.5
2,788,557	-		TX73_012690	0.28	+1.0
2,788,577	+		TX73_012690	0.30	-0.1
2,788,621	-		TX73_012690	0.35	+0.5
2,788,641	-		TX73_012690	0.37	-0.5
2,788,651	-		TX73_012690	0.38	+1.1
2,788,651	-		TX73_012690	0.38	-0.3
2,788,661	+		TX73_012690	0.39	+0.9
2,788,670	-		TX73_012690	0.40	+0.4
2,788,674	-		TX73_012690	0.41	-0.2
2,788,685	+		TX73_012690	0.42	+0.4
2,788,696	+		TX73_012690	0.43	+0.5
2,788,727	+		TX73_012690	0.47	-0.6
2,788,727	+		TX73_012690	0.47	-0.3
2,788,727	-		TX73_012690	0.47	+0.2
2,788,732	+		TX73_012690	0.47	-1.5
2,788,737	+		TX73_012690	0.48	-0.7
2,788,766	-		TX73_012690	0.51	+0.2
2,788,821	-		TX73_012690	0.57	-0.0
2,788,829	+		TX73_012690	0.58	-0.6
2,788,837	-		TX73_012690	0.59	-1.1
2,788,862	+		TX73_012690	0.62	-0.3
2,788,880	+		TX73_012690	0.64	+0.0
2,788,888	-		TX73_012690	0.65	+0.7
2,788,918	-		TX73_012690	0.68	+0.7
2,788,940	+		TX73_012690	0.70	+1.1
2,788,948	-		TX73_012690	0.71	-0.0
2,788,948	-		TX73_012690	0.71	+1.4
2,788,948	-		TX73_012690	0.71	-0.1
2,788,958	-		TX73_012690	0.72	-0.2
2,788,970	-		TX73_012690	0.74	+0.2
2,789,028	-		TX73_012690	0.80	+0.8
2,789,166	-				+0.2
2,789,166	-				+0.5
2,789,226	+				-0.0
2,789,234	-				-0.1
2,789,234	-				-0.0
2,789,267	+				+1.3
2,789,295	-				+0.0
2,789,326	-				-0.4
2,789,327	+				+0.3
2,789,327	+				-0.0
2,789,335	-				+0.1
2,789,335	-				-0.8
2,789,335	-				-0.7
2,789,419	-				+0.9
2,789,419	-				-1.1
2,789,419	-				+1.4
2,789,419	-				+0.2
2,789,454	+				-0.6
2,789,482	+		TX73_012695	0.11	+0.6
2,789,513	+		TX73_012695	0.13	-0.2
2,789,532	+		TX73_012695	0.15	-0.0
2,789,660	-		TX73_012695	0.24	-1.9
2,789,662	-		TX73_012695	0.24	-0.3
2,789,688	-		TX73_012695	0.26	-0.2
2,789,701	-		TX73_012695	0.27	-0.5
2,789,708	+		TX73_012695	0.28	-0.9
2,789,718	+		TX73_012695	0.28	+0.0
2,789,733	-		TX73_012695	0.29	-0.5
2,789,760	+		TX73_012695	0.31	+0.3
2,789,820	+		TX73_012695	0.36	+1.8
2,789,881	+		TX73_012695	0.40	+0.6
2,789,881	+		TX73_012695	0.40	+0.3
2,789,889	-		TX73_012695	0.41	+0.0
2,789,889	-		TX73_012695	0.41	+0.3
2,789,890	+		TX73_012695	0.41	+0.4
2,789,913	-		TX73_012695	0.43	-0.5
2,789,963	+		TX73_012695	0.46	-0.7
2,789,963	+		TX73_012695	0.46	+0.2
2,789,963	+		TX73_012695	0.46	+0.2
2,789,963	+		TX73_012695	0.46	+0.0
2,789,971	-		TX73_012695	0.47	+0.1
2,789,971	-		TX73_012695	0.47	+0.7
2,789,997	+		TX73_012695	0.49	-0.1
2,789,997	+		TX73_012695	0.49	+0.2
2,789,997	+		TX73_012695	0.49	+1.1
2,789,997	+		TX73_012695	0.49	+0.9
2,790,007	+		TX73_012695	0.49	-0.0
2,790,020	-		TX73_012695	0.50	+0.5
2,790,025	-		TX73_012695	0.51	-1.2
2,790,029	+		TX73_012695	0.51	+0.4
2,790,046	-		TX73_012695	0.52	+0.7
2,790,048	+		TX73_012695	0.52	+2.0
2,790,048	+		TX73_012695	0.52	+0.7
2,790,048	+		TX73_012695	0.52	+0.6
2,790,049	-		TX73_012695	0.52	+0.5
2,790,049	-		TX73_012695	0.52	-0.9
2,790,056	-		TX73_012695	0.53	+0.3
2,790,073	+		TX73_012695	0.54	-0.8
2,790,152	+		TX73_012695	0.60	+0.3
2,790,200	-		TX73_012695	0.63	-1.0
2,790,205	+		TX73_012695	0.64	+1.2
2,790,213	-		TX73_012695	0.64	-0.8
2,790,225	-		TX73_012695	0.65	-0.5
2,790,235	-		TX73_012695	0.66	-0.1
2,790,250	-		TX73_012695	0.67	+0.4
2,790,275	+		TX73_012695	0.69	+0.0
2,790,289	+		TX73_012695	0.70	-0.5
2,790,312	-		TX73_012695	0.72	+0.0
2,790,319	-		TX73_012695	0.72	-0.2
2,790,321	+		TX73_012695	0.72	+0.4
2,790,325	+		TX73_012695	0.73	+0.4
2,790,325	+		TX73_012695	0.73	+0.8
2,790,363	+		TX73_012695	0.75	-0.1
2,790,363	+		TX73_012695	0.75	+0.0
2,790,376	+		TX73_012695	0.76	-0.1
2,790,391	+		TX73_012695	0.77	-1.0
2,790,391	+		TX73_012695	0.77	+0.9
2,790,393	+		TX73_012695	0.78	-0.8
2,790,397	-		TX73_012695	0.78	-1.1
2,790,406	-		TX73_012695	0.78	+0.4
2,790,406	-		TX73_012695	0.78	+0.5
2,790,409	+		TX73_012695	0.79	+0.3
2,790,509	-		TX73_012695	0.86	-1.5
2,790,514	-		TX73_012695	0.86	-0.7
2,790,516	+		TX73_012695	0.87	-0.1
2,790,516	+		TX73_012695	0.87	-0.0
2,790,521	+		TX73_012695	0.87	-0.9
2,790,521	+		TX73_012695	0.87	-2.0
2,790,521	+		TX73_012695	0.87	-0.1
2,790,524	-		TX73_012695	0.87	-0.5
2,790,524	-		TX73_012695	0.87	+0.4
2,790,524	-		TX73_012695	0.87	-0.0
2,790,526	+		TX73_012695	0.87	+0.2
2,790,526	+		TX73_012695	0.87	+0.7
2,790,526	+		TX73_012695	0.87	-0.7
2,790,526	-		TX73_012695	0.87	+0.4
2,790,529	-		TX73_012695	0.87	+0.4
2,790,531	+		TX73_012695	0.88	+0.3
2,790,531	+		TX73_012695	0.88	-0.6
2,790,531	+		TX73_012695	0.88	-0.7
2,790,534	-		TX73_012695	0.88	+0.1
2,790,534	-		TX73_012695	0.88	-0.0
2,790,534	-		TX73_012695	0.88	-0.8
2,790,539	-		TX73_012695	0.88	+0.3
2,790,544	-		TX73_012695	0.89	+0.1
2,790,559	+		TX73_012695	0.90	+0.9
2,790,567	+				+0.5
2,790,567	+				+0.9
2,790,567	-				-0.2
2,790,575	-				+0.2
2,790,604	+				+0.3
2,790,609	+				+0.5
2,790,612	-				+0.3
2,790,636	+				-1.2
2,790,646	+				+0.0
2,790,682	+				+0.2
2,790,690	-				+1.7
2,790,698	+				-0.1
2,790,700	-				-1.1
2,790,714	-				-0.6
2,790,734	+				-0.4
2,790,755	+				-1.7
2,790,763	-				+0.4
2,790,818	+				-0.3
2,790,820	+				-0.4
2,790,826	+				-0.2
2,790,826	-				-0.6
2,790,826	-				-0.7
2,790,828	-				+0.2
2,790,828	-				-0.2
2,790,841	+				-2.2
2,790,841	+				+2.2
2,790,851	+				+0.3
2,790,852	+				+0.5
2,790,852	+				+0.6
2,790,852	+				-0.8
2,790,860	-				-0.4
2,790,862	-				+0.4
2,790,877	-		TX73_012700	0.12	-0.2
2,790,884	+		TX73_012700	0.13	+0.8
2,790,884	+		TX73_012700	0.13	-0.1
2,790,916	+		TX73_012700	0.17	+0.4
2,790,917	-		TX73_012700	0.17	-1.0
2,790,917	-		TX73_012700	0.17	-1.7
2,790,917	-		TX73_012700	0.17	+0.3
2,790,949	+		TX73_012700	0.22	+0.4
2,790,950	-		TX73_012700	0.22	-0.8
2,790,951	+		TX73_012700	0.22	-0.3
2,790,975	-		TX73_012700	0.26	+0.1
2,790,978	+		TX73_012700	0.26	-0.6
2,790,978	+		TX73_012700	0.26	+0.6
2,790,978	+		TX73_012700	0.26	-0.7
2,790,979	+		TX73_012700	0.26	-0.5
2,790,981	-		TX73_012700	0.27	-1.5
2,790,986	-		TX73_012700	0.27	-0.3
2,790,986	-		TX73_012700	0.27	-0.7
2,790,986	-		TX73_012700	0.27	+0.6
2,790,987	-		TX73_012700	0.28	-0.9
2,790,987	-		TX73_012700	0.28	+0.5
2,790,988	+		TX73_012700	0.28	-1.4
2,791,025	+		TX73_012700	0.33	-0.2
2,791,032	+		TX73_012700	0.34	-0.0
2,791,033	-		TX73_012700	0.34	-0.1
2,791,041	-		TX73_012700	0.35	-2.6
2,791,068	+		TX73_012700	0.39	+0.2
2,791,099	+		TX73_012700	0.44	-1.0
2,791,114	+		TX73_012700	0.46	-0.1
2,791,114	+		TX73_012700	0.46	+0.3
2,791,114	+		TX73_012700	0.46	+0.0
2,791,114	+		TX73_012700	0.46	+0.5
2,791,122	-		TX73_012700	0.47	-0.8
2,791,122	-		TX73_012700	0.47	+0.0
2,791,122	-		TX73_012700	0.47	-0.1
2,791,130	-		TX73_012700	0.48	-0.4
2,791,134	+		TX73_012700	0.49	-0.5
2,791,134	+		TX73_012700	0.49	+0.0
2,791,142	-		TX73_012700	0.50	+0.1
2,791,147	+		TX73_012700	0.51	-1.0
2,791,159	+		TX73_012700	0.52	-0.7
2,791,218	+		TX73_012700	0.61	-0.5
2,791,227	-		TX73_012700	0.62	-0.9
2,791,227	-		TX73_012700	0.62	-0.4
2,791,241	+		TX73_012700	0.64	-0.1
2,791,249	-		TX73_012700	0.66	+0.8
2,791,255	-		TX73_012700	0.66	+0.4
2,791,285	-		TX73_012700	0.71	+0.7
2,791,311	+		TX73_012700	0.74	-0.0
2,791,316	+		TX73_012700	0.75	-1.2
2,791,319	-		TX73_012700	0.76	-0.3
2,791,359	+		TX73_012700	0.81	-1.2
2,791,367	-		TX73_012700	0.83	+0.4
2,791,379	-		TX73_012700	0.84	-0.2
2,791,391	+		TX73_012700	0.86	-0.8
2,791,391	+		TX73_012700	0.86	-0.7
2,791,391	+		TX73_012700	0.86	+0.3
2,791,399	-		TX73_012700	0.87	-0.3
2,791,399	-		TX73_012700	0.87	+0.4
2,791,442	-				-0.2
2,791,484	-				-0.7
2,791,494	+				-0.2
2,791,519	+				+0.5
2,791,521	-				-1.1
2,791,521	-				+0.5
2,791,551	+				-1.1
2,791,581	+				-1.1
2,791,589	-				-0.3
2,791,626	+				-0.3
2,791,647	-				+0.6
2,791,674	+				-0.1
2,791,693	-				+0.5