Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_017365

Experiment: Pimelic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pimelic (C); anaerobic
3,802,245	+		TX73_017360	0.30	+0.0
3,802,260	+		TX73_017360	0.31	-0.0
3,802,277	+		TX73_017360	0.32	+1.0
3,802,299	-		TX73_017360	0.34	+0.4
3,802,353	-		TX73_017360	0.38	-0.7
3,802,355	-		TX73_017360	0.38	-0.3
3,802,355	-		TX73_017360	0.38	+0.1
3,802,370	-		TX73_017360	0.39	+0.9
3,802,370	-		TX73_017360	0.39	+0.2
3,802,383	+		TX73_017360	0.40	+0.8
3,802,429	-		TX73_017360	0.43	+0.5
3,802,429	-		TX73_017360	0.43	+0.7
3,802,435	-		TX73_017360	0.43	-0.8
3,802,443	+		TX73_017360	0.44	+0.6
3,802,443	+		TX73_017360	0.44	-0.1
3,802,451	-		TX73_017360	0.44	+0.7
3,802,451	-		TX73_017360	0.44	+0.1
3,802,466	-		TX73_017360	0.45	+0.1
3,802,479	-		TX73_017360	0.46	+0.9
3,802,502	-		TX73_017360	0.48	-0.2
3,802,522	+		TX73_017360	0.49	+0.8
3,802,535	-		TX73_017360	0.50	+0.5
3,802,560	+		TX73_017360	0.52	-0.4
3,802,560	+		TX73_017360	0.52	+0.9
3,802,568	-		TX73_017360	0.53	-1.0
3,802,605	+		TX73_017360	0.55	-1.1
3,802,615	+		TX73_017360	0.56	+0.5
3,802,671	+		TX73_017360	0.60	-0.5
3,802,679	-		TX73_017360	0.60	-0.0
3,802,721	+		TX73_017360	0.63	-0.0
3,802,732	-		TX73_017360	0.64	+0.1
3,802,758	+		TX73_017360	0.66	+0.5
3,802,758	+		TX73_017360	0.66	+0.7
3,802,758	+		TX73_017360	0.66	-0.1
3,802,758	+		TX73_017360	0.66	+1.2
3,802,758	+		TX73_017360	0.66	-0.2
3,802,760	+		TX73_017360	0.66	+0.8
3,802,766	-		TX73_017360	0.66	-0.3
3,802,766	-		TX73_017360	0.66	+0.5
3,802,766	-		TX73_017360	0.66	+0.3
3,802,766	-		TX73_017360	0.66	+0.0
3,802,766	-		TX73_017360	0.66	+1.1
3,802,768	-		TX73_017360	0.66	-0.7
3,802,799	-		TX73_017360	0.69	+0.1
3,802,813	+		TX73_017360	0.70	-0.1
3,802,821	-		TX73_017360	0.70	+0.0
3,802,821	-		TX73_017360	0.70	-0.1
3,802,821	-		TX73_017360	0.70	-0.1
3,802,823	+		TX73_017360	0.70	-2.3
3,802,836	-		TX73_017360	0.71	-0.4
3,802,886	-		TX73_017360	0.75	+0.6
3,802,897	-		TX73_017360	0.75	+0.7
3,802,904	-		TX73_017360	0.76	+0.3
3,802,909	+		TX73_017360	0.76	+0.6
3,802,909	+		TX73_017360	0.76	-0.4
3,802,909	+		TX73_017360	0.76	+0.8
3,802,917	-		TX73_017360	0.77	-0.2
3,802,917	-		TX73_017360	0.77	-1.7
3,802,917	-		TX73_017360	0.77	-0.2
3,802,917	-		TX73_017360	0.77	-0.4
3,802,917	-		TX73_017360	0.77	+0.5
3,802,922	-		TX73_017360	0.77	-0.7
3,802,943	+		TX73_017360	0.79	-1.1
3,802,949	-		TX73_017360	0.79	-0.1
3,802,951	+		TX73_017360	0.79	+0.2
3,802,959	-		TX73_017360	0.80	+0.1
3,802,982	+		TX73_017360	0.81	-0.4
3,803,000	-		TX73_017360	0.83	+2.6
3,803,000	-		TX73_017360	0.83	-0.1
3,803,065	+		TX73_017360	0.87	-0.1
3,803,083	+		TX73_017360	0.88	+0.2
3,803,093	-		TX73_017360	0.89	-0.4
3,803,171	+				+0.3
3,803,171	+				+0.3
3,803,171	-				+0.5
3,803,179	-				+0.2
3,803,179	-				+1.1
3,803,181	+				+0.9
3,803,189	-				+1.6
3,803,189	-				+0.3
3,803,198	-				-0.0
3,803,329	+				+1.0
3,803,335	-				+0.8
3,803,415	-		TX73_017365	0.14	-1.2
3,803,429	+		TX73_017365	0.15	+0.6
3,803,451	-		TX73_017365	0.17	+0.7
3,803,478	+		TX73_017365	0.19	+1.0
3,803,483	+		TX73_017365	0.20	+0.1
3,803,508	+		TX73_017365	0.22	+1.1
3,803,510	+		TX73_017365	0.22	-0.3
3,803,588	+		TX73_017365	0.28	+0.9
3,803,592	+		TX73_017365	0.29	+0.4
3,803,638	+		TX73_017365	0.33	-0.3
3,803,653	+		TX73_017365	0.34	+0.3
3,803,662	+		TX73_017365	0.34	-0.3
3,803,722	-		TX73_017365	0.39	-0.7
3,803,740	+		TX73_017365	0.41	+1.2
3,803,773	-		TX73_017365	0.44	+0.3
3,803,813	+		TX73_017365	0.47	+0.0
3,803,818	+		TX73_017365	0.47	+1.4
3,803,824	+		TX73_017365	0.48	-0.6
3,803,828	-		TX73_017365	0.48	+0.7
3,803,856	+		TX73_017365	0.51	-0.9
3,803,870	+		TX73_017365	0.52	+0.9
3,803,872	+		TX73_017365	0.52	+0.5
3,803,894	+		TX73_017365	0.54	-0.1
3,803,895	+		TX73_017365	0.54	-0.7
3,803,998	+		TX73_017365	0.62	-0.1
3,804,042	-		TX73_017365	0.66	-0.2
3,804,072	+		TX73_017365	0.68	-0.3
3,804,080	-		TX73_017365	0.69	+0.9
3,804,083	+		TX73_017365	0.69	+0.6
3,804,134	+		TX73_017365	0.74	+0.0
3,804,134	+		TX73_017365	0.74	+0.9
3,804,134	+		TX73_017365	0.74	-0.8
3,804,134	+		TX73_017365	0.74	+0.3
3,804,134	+		TX73_017365	0.74	+0.6
3,804,134	+		TX73_017365	0.74	-0.6
3,804,134	+		TX73_017365	0.74	+0.0
3,804,134	+		TX73_017365	0.74	+0.5
3,804,142	-		TX73_017365	0.74	-0.4
3,804,142	-		TX73_017365	0.74	+1.1
3,804,147	+		TX73_017365	0.75	-0.5
3,804,174	-		TX73_017365	0.77	+1.4
3,804,175	+		TX73_017365	0.77	-2.2
3,804,194	+		TX73_017365	0.78	+0.5
3,804,204	+		TX73_017365	0.79	-0.3
3,804,209	+		TX73_017365	0.80	-1.0
3,804,212	-		TX73_017365	0.80	-0.2
3,804,236	+		TX73_017365	0.82	+1.4
3,804,244	-		TX73_017365	0.83	+0.0
3,804,244	-		TX73_017365	0.83	+0.4
3,804,251	+		TX73_017365	0.83	+1.7
3,804,278	+		TX73_017365	0.85	-0.2
3,804,300	-		TX73_017365	0.87	-0.9
3,804,302	+		TX73_017365	0.87	-1.0
3,804,302	+		TX73_017365	0.87	-0.2
3,804,302	+		TX73_017365	0.87	-0.8
3,804,320	+		TX73_017365	0.89	+0.5
3,804,360	+				+3.1
3,804,369	+				+0.3
3,804,386	+				-0.3
3,804,487	+				+0.2
3,804,524	+				-0.3
3,804,533	-				-0.8
3,804,542	+				-0.7
3,804,545	-				+0.2
3,804,550	-				-0.3
3,804,551	+				-0.1
3,804,556	+				-0.0
3,804,578	-				+0.5
3,804,608	-				+0.0
3,804,627	-				-0.0
3,804,631	+				+0.3
3,804,639	-				+0.7
3,804,650	-				-0.1
3,804,669	-				-0.5
3,804,676	+				+0.3
3,804,679	-				+0.7
3,804,686	+				+0.2
3,804,686	+				+0.2
3,804,686	+				+0.6
3,804,691	+				-0.3
3,804,706	-				+0.3
3,804,738	-				-0.1
3,804,746	-				+1.0
3,804,748	+				-0.3
3,804,755	+				+0.7
3,804,774	+				-0.8
3,804,784	+				-0.9
3,804,791	+				-0.4
3,804,799	-				+1.0
3,804,799	-				+0.3
3,804,799	-				+0.0
3,804,799	-				+1.5
3,804,806	+				-0.8
3,804,814	-				-0.3
3,804,814	-				+0.1
3,804,815	-				+0.2
3,804,822	+				+0.8
3,804,826	+				-1.1
3,804,828	+				-0.2
3,804,835	+				-0.2
3,804,836	-				-0.4
3,804,836	-				-0.6
3,804,843	-				+0.0
3,804,844	-				-0.0
3,804,860	-				-0.8
3,804,866	+				+0.1
3,804,880	+				+0.1
3,804,890	+				-0.2
3,804,892	-				-0.2
3,804,893	-				-0.5
3,804,907	+				-0.1
3,804,926	+				+1.3
3,804,955	-				+1.5
3,805,012	-				+0.8
3,805,056	+				-0.0
3,805,058	+				-0.5
3,805,064	-				+0.1
3,805,084	-				+0.5
3,805,088	+				+0.2
3,805,093	-				+0.4
3,805,096	-				-0.4
3,805,112	+				-0.5
3,805,140	-				+0.8
3,805,164	+				-0.7
3,805,174	+				+0.1
3,805,251	+		TX73_017370	0.14	-0.7
3,805,251	+		TX73_017370	0.14	+0.6
3,805,253	-		TX73_017370	0.15	-0.0
3,805,262	-		TX73_017370	0.18	+0.9
3,805,285	-		TX73_017370	0.27	-1.6
3,805,288	+		TX73_017370	0.29	+0.6
3,805,295	-		TX73_017370	0.31	+0.2
3,805,295	-		TX73_017370	0.31	+0.8
3,805,295	-		TX73_017370	0.31	-1.0
3,805,301	+		TX73_017370	0.34	-0.5
3,805,301	+		TX73_017370	0.34	+1.6
3,805,306	+		TX73_017370	0.36	+0.6
3,805,311	+		TX73_017370	0.38	+0.4
3,805,332	+		TX73_017370	0.46	-0.2
3,805,345	-		TX73_017370	0.51	+0.0
3,805,434	+		TX73_017370	0.87	-1.2
3,805,434	+		TX73_017370	0.87	+0.4
3,805,434	+		TX73_017370	0.87	-0.4
3,805,438	-		TX73_017370	0.88	-0.6
3,805,442	-				+0.0