Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_004760

Experiment: Pimelic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Pimelic (C); anaerobic
1,024,634	-		TX73_004755	0.21	+0.2
1,024,637	+		TX73_004755	0.21	+0.2
1,024,660	+		TX73_004755	0.24	+0.1
1,024,660	+		TX73_004755	0.24	-0.2
1,024,660	-		TX73_004755	0.24	+3.6
1,024,668	-		TX73_004755	0.24	-0.7
1,024,698	-		TX73_004755	0.27	+0.2
1,024,700	-		TX73_004755	0.27	+0.4
1,024,716	+		TX73_004755	0.29	-1.2
1,024,736	-		TX73_004755	0.31	+1.0
1,024,739	+		TX73_004755	0.31	-0.3
1,024,739	+		TX73_004755	0.31	+0.4
1,024,739	+		TX73_004755	0.31	+0.5
1,024,739	+		TX73_004755	0.31	+0.1
1,024,747	-		TX73_004755	0.32	+0.3
1,024,747	-		TX73_004755	0.32	+0.4
1,024,747	-		TX73_004755	0.32	+0.2
1,024,747	-		TX73_004755	0.32	-1.0
1,024,747	-		TX73_004755	0.32	+0.8
1,024,750	+		TX73_004755	0.32	+0.5
1,024,805	+		TX73_004755	0.38	+0.3
1,024,841	+		TX73_004755	0.41	-0.7
1,024,861	+		TX73_004755	0.43	+1.2
1,024,863	-		TX73_004755	0.43	+0.2
1,024,873	-		TX73_004755	0.44	-0.5
1,024,873	-		TX73_004755	0.44	-0.2
1,024,876	+		TX73_004755	0.45	+0.4
1,024,943	+		TX73_004755	0.51	-0.4
1,024,953	+		TX73_004755	0.52	+0.6
1,024,956	-		TX73_004755	0.53	-1.3
1,024,961	-		TX73_004755	0.53	+0.4
1,024,964	+		TX73_004755	0.53	+0.7
1,024,964	+		TX73_004755	0.53	+0.5
1,024,972	-		TX73_004755	0.54	-0.0
1,024,972	-		TX73_004755	0.54	-0.1
1,024,974	+		TX73_004755	0.54	-0.8
1,024,982	-		TX73_004755	0.55	+1.2
1,024,982	-		TX73_004755	0.55	-0.1
1,024,997	+		TX73_004755	0.57	-0.1
1,025,024	+		TX73_004755	0.59	-0.0
1,025,110	-		TX73_004755	0.68	+0.6
1,025,159	-		TX73_004755	0.72	+0.1
1,025,235	-		TX73_004755	0.80	-0.1
1,025,245	+		TX73_004755	0.81	-0.7
1,025,245	+		TX73_004755	0.81	-1.3
1,025,245	+		TX73_004755	0.81	-0.0
1,025,245	+		TX73_004755	0.81	+0.8
1,025,253	-		TX73_004755	0.82	+0.1
1,025,255	+		TX73_004755	0.82	-0.2
1,025,255	+		TX73_004755	0.82	+0.8
1,025,255	+		TX73_004755	0.82	-0.3
1,025,260	+		TX73_004755	0.82	-0.8
1,025,263	-		TX73_004755	0.83	+0.2
1,025,268	-		TX73_004755	0.83	+1.0
1,025,268	-		TX73_004755	0.83	+0.0
1,025,269	+		TX73_004755	0.83	-0.5
1,025,305	-		TX73_004755	0.87	-0.1
1,025,316	+		TX73_004755	0.88	-0.3
1,025,321	+		TX73_004755	0.88	-0.3
1,025,321	+		TX73_004755	0.88	+0.7
1,025,329	-		TX73_004755	0.89	+0.7
1,025,348	-				-0.3
1,025,410	+				-0.2
1,025,427	+				+0.6
1,025,435	+				+0.4
1,025,435	-				-0.7
1,025,440	+				-0.3
1,025,448	-				-1.5
1,025,450	+				-0.4
1,025,450	+				-0.5
1,025,497	-				-0.7
1,025,499	+				+0.2
1,025,499	-				+0.1
1,025,507	-				-0.4
1,025,508	+				-0.7
1,025,571	+				-0.5
1,025,571	+				+1.0
1,025,571	+				+0.9
1,025,579	-				+0.2
1,025,618	+				+0.9
1,025,628	+				+0.1
1,025,628	+				-0.3
1,025,636	-				-0.2
1,025,636	-				-0.4
1,025,636	-				+0.4
1,025,641	-				-1.1
1,025,663	+				-0.5
1,025,687	+				+0.4
1,025,687	+				+0.9
1,025,695	-				-0.5
1,025,724	-		TX73_004760	0.12	-0.5
1,025,726	+		TX73_004760	0.13	-0.0
1,025,734	-		TX73_004760	0.14	-0.3
1,025,734	-		TX73_004760	0.14	-0.2
1,025,736	+		TX73_004760	0.14	-1.1
1,025,767	-		TX73_004760	0.18	+0.8
1,025,769	+		TX73_004760	0.18	-0.3
1,025,772	-		TX73_004760	0.18	-1.3
1,025,826	-		TX73_004760	0.25	+0.4
1,025,893	-		TX73_004760	0.33	+0.6
1,025,898	-		TX73_004760	0.33	+0.3
1,025,922	+		TX73_004760	0.36	+0.2
1,025,922	-		TX73_004760	0.36	-0.2
1,025,927	+		TX73_004760	0.37	-0.3
1,025,935	-		TX73_004760	0.38	-1.2
1,025,935	-		TX73_004760	0.38	-0.9
1,025,943	-		TX73_004760	0.39	-0.0
1,025,975	+		TX73_004760	0.43	-0.5
1,025,975	+		TX73_004760	0.43	-1.2
1,025,999	-		TX73_004760	0.46	-1.3
1,025,999	-		TX73_004760	0.46	-0.9
1,026,109	-		TX73_004760	0.59	-0.6
1,026,113	+		TX73_004760	0.60	+1.2
1,026,113	+		TX73_004760	0.60	-0.6
1,026,113	+		TX73_004760	0.60	+0.2
1,026,121	-		TX73_004760	0.60	+0.4
1,026,121	-		TX73_004760	0.60	-0.5
1,026,154	-		TX73_004760	0.64	-0.3
1,026,260	+		TX73_004760	0.77	-0.2
1,026,260	+		TX73_004760	0.77	-0.2
1,026,260	+		TX73_004760	0.77	-0.6
1,026,266	+		TX73_004760	0.78	-0.6
1,026,275	-		TX73_004760	0.79	-0.2
1,026,348	-		TX73_004760	0.88	-0.1
1,026,392	+				-1.5
1,026,392	+				-0.2
1,026,400	-				-0.3
1,026,482	-				-0.2
1,026,490	+				-0.8
1,026,505	-				+0.4
1,026,528	+				-1.2
1,026,640	+		TX73_004765	0.19	-0.3
1,026,739	+		TX73_004765	0.29	-0.2
1,026,773	-		TX73_004765	0.32	+0.2
1,026,782	-		TX73_004765	0.33	+0.4
1,026,787	-		TX73_004765	0.34	+0.1
1,026,802	+		TX73_004765	0.35	+1.1
1,026,838	+		TX73_004765	0.38	-1.2
1,026,846	-		TX73_004765	0.39	+1.1
1,026,878	+		TX73_004765	0.42	-0.9
1,026,878	+		TX73_004765	0.42	-1.6
1,026,886	-		TX73_004765	0.43	-0.7
1,026,942	+		TX73_004765	0.49	-0.2
1,026,957	+		TX73_004765	0.50	-0.2
1,026,972	+		TX73_004765	0.52	-0.6
1,027,059	-		TX73_004765	0.60	+1.0
1,027,068	+		TX73_004765	0.61	+0.0
1,027,074	+		TX73_004765	0.62	-1.5
1,027,082	+		TX73_004765	0.62	+0.0
1,027,143	+		TX73_004765	0.68	+0.3
1,027,225	+		TX73_004765	0.76	-0.6
1,027,233	-		TX73_004765	0.77	-0.1
1,027,233	-		TX73_004765	0.77	+0.6
1,027,254	-		TX73_004765	0.79	-0.9
1,027,268	-		TX73_004765	0.80	-0.9
1,027,277	+		TX73_004765	0.81	-0.3
1,027,277	+		TX73_004765	0.81	+0.1
1,027,277	+		TX73_004765	0.81	-0.2
1,027,277	+		TX73_004765	0.81	+0.8
1,027,285	-		TX73_004765	0.82	+1.1
1,027,285	-		TX73_004765	0.82	-1.3
1,027,285	-		TX73_004765	0.82	+0.6
1,027,318	+		TX73_004765	0.85	-0.5
1,027,340	+		TX73_004765	0.87	+0.0
1,027,340	+		TX73_004765	0.87	-1.0
1,027,340	+		TX73_004765	0.87	-0.4
1,027,348	-		TX73_004765	0.88	-0.4
1,027,348	-		TX73_004765	0.88	+0.1
1,027,348	-		TX73_004765	0.88	+0.6
1,027,398	+				+0.4
1,027,406	-				-0.3