Experiment: L-Malic (C); anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_013590 and TX73_013595 are separated by 241 nucleotides TX73_013595 and TX73_013600 are separated by 466 nucleotides
TX73_013590: TX73_013590 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 2,984,783 to 2,985,991
_013590
TX73_013595: TX73_013595 - alpha/beta hydrolase, at 2,986,233 to 2,987,219
_013595
TX73_013600: TX73_013600 - carboxylesterase/lipase family protein, at 2,987,686 to 2,989,347
_013600
Position (kb)
2986
2987
2988 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2985.233 kb on - strand, within TX73_013590 at 2985.264 kb on + strand, within TX73_013590 at 2985.286 kb on - strand, within TX73_013590 at 2985.311 kb on + strand, within TX73_013590 at 2985.383 kb on - strand, within TX73_013590 at 2985.400 kb on + strand, within TX73_013590 at 2985.425 kb on - strand, within TX73_013590 at 2985.483 kb on + strand, within TX73_013590 at 2985.563 kb on + strand, within TX73_013590 at 2985.619 kb on + strand, within TX73_013590 at 2985.670 kb on + strand, within TX73_013590 at 2985.689 kb on - strand, within TX73_013590 at 2985.800 kb on + strand, within TX73_013590 at 2985.805 kb on + strand, within TX73_013590 at 2985.808 kb on - strand, within TX73_013590 at 2985.892 kb on + strand at 2985.892 kb on + strand at 2985.892 kb on + strand at 2985.897 kb on + strand at 2985.900 kb on - strand at 2985.900 kb on - strand at 2985.900 kb on - strand at 2985.900 kb on - strand at 2985.900 kb on - strand at 2985.939 kb on + strand at 2985.939 kb on + strand at 2985.939 kb on + strand at 2985.939 kb on + strand at 2985.939 kb on + strand at 2985.939 kb on + strand at 2985.939 kb on + strand at 2985.939 kb on + strand at 2985.947 kb on - strand at 2985.947 kb on - strand at 2985.947 kb on - strand at 2985.947 kb on - strand at 2985.991 kb on + strand at 2986.049 kb on + strand at 2986.141 kb on + strand at 2986.141 kb on + strand at 2986.153 kb on + strand at 2986.153 kb on + strand at 2986.161 kb on - strand at 2986.180 kb on + strand at 2986.223 kb on - strand at 2986.223 kb on - strand at 2986.223 kb on - strand at 2986.226 kb on + strand at 2986.261 kb on + strand at 2986.275 kb on + strand at 2986.304 kb on + strand at 2986.336 kb on + strand, within TX73_013595 at 2986.372 kb on - strand, within TX73_013595 at 2986.379 kb on + strand, within TX73_013595 at 2986.393 kb on - strand, within TX73_013595 at 2986.420 kb on - strand, within TX73_013595 at 2986.503 kb on - strand, within TX73_013595 at 2986.503 kb on - strand, within TX73_013595 at 2986.505 kb on + strand, within TX73_013595 at 2986.505 kb on - strand, within TX73_013595 at 2986.510 kb on + strand, within TX73_013595 at 2986.513 kb on - strand, within TX73_013595 at 2986.513 kb on - strand, within TX73_013595 at 2986.533 kb on - strand, within TX73_013595 at 2986.533 kb on - strand, within TX73_013595 at 2986.543 kb on + strand, within TX73_013595 at 2986.570 kb on - strand, within TX73_013595 at 2986.615 kb on + strand, within TX73_013595 at 2986.682 kb on - strand, within TX73_013595 at 2986.707 kb on - strand, within TX73_013595 at 2986.725 kb on + strand, within TX73_013595 at 2986.725 kb on + strand, within TX73_013595 at 2986.785 kb on - strand, within TX73_013595 at 2986.804 kb on - strand, within TX73_013595 at 2986.804 kb on - strand, within TX73_013595 at 2986.845 kb on + strand, within TX73_013595 at 2986.851 kb on + strand, within TX73_013595 at 2986.861 kb on + strand, within TX73_013595 at 2986.913 kb on + strand, within TX73_013595 at 2986.920 kb on - strand, within TX73_013595 at 2986.920 kb on - strand, within TX73_013595 at 2986.939 kb on - strand, within TX73_013595 at 2986.962 kb on + strand, within TX73_013595 at 2986.962 kb on + strand, within TX73_013595 at 2986.970 kb on - strand, within TX73_013595 at 2987.027 kb on + strand, within TX73_013595 at 2987.053 kb on + strand, within TX73_013595 at 2987.055 kb on + strand, within TX73_013595 at 2987.063 kb on - strand, within TX73_013595 at 2987.146 kb on + strand at 2987.228 kb on + strand at 2987.236 kb on - strand at 2987.236 kb on - strand at 2987.242 kb on - strand at 2987.273 kb on - strand at 2987.298 kb on - strand at 2987.308 kb on - strand at 2987.314 kb on - strand at 2987.382 kb on - strand at 2987.423 kb on + strand at 2987.427 kb on - strand at 2987.442 kb on - strand at 2987.604 kb on + strand at 2987.619 kb on - strand at 2987.671 kb on - strand at 2987.671 kb on - strand at 2987.671 kb on - strand at 2987.671 kb on - strand at 2987.723 kb on - strand at 2987.820 kb on + strand at 2987.829 kb on + strand at 2987.862 kb on + strand, within TX73_013600 at 2987.862 kb on + strand, within TX73_013600 at 2987.862 kb on + strand, within TX73_013600 at 2987.869 kb on + strand, within TX73_013600 at 2987.870 kb on - strand, within TX73_013600 at 2987.870 kb on - strand, within TX73_013600 at 2987.870 kb on - strand, within TX73_013600 at 2987.874 kb on + strand, within TX73_013600 at 2987.906 kb on - strand, within TX73_013600 at 2988.042 kb on + strand, within TX73_013600 at 2988.047 kb on + strand, within TX73_013600 at 2988.114 kb on + strand, within TX73_013600
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C); anaerobic remove 2,985,233 - TX73_013590 0.37 -0.6 2,985,264 + TX73_013590 0.40 -0.7 2,985,286 - TX73_013590 0.42 +0.4 2,985,311 + TX73_013590 0.44 +0.2 2,985,383 - TX73_013590 0.50 +0.7 2,985,400 + TX73_013590 0.51 -0.9 2,985,425 - TX73_013590 0.53 -0.6 2,985,483 + TX73_013590 0.58 -0.9 2,985,563 + TX73_013590 0.65 +0.1 2,985,619 + TX73_013590 0.69 -0.4 2,985,670 + TX73_013590 0.73 +0.8 2,985,689 - TX73_013590 0.75 -0.7 2,985,800 + TX73_013590 0.84 -1.6 2,985,805 + TX73_013590 0.85 -0.5 2,985,808 - TX73_013590 0.85 +0.9 2,985,892 + +1.8 2,985,892 + +0.4 2,985,892 + +0.2 2,985,897 + -0.1 2,985,900 - -0.6 2,985,900 - +0.8 2,985,900 - -0.6 2,985,900 - +0.2 2,985,900 - +0.6 2,985,939 + -0.7 2,985,939 + -1.2 2,985,939 + +1.1 2,985,939 + +0.1 2,985,939 + +0.0 2,985,939 + -1.1 2,985,939 + +0.1 2,985,939 + -0.6 2,985,947 - +0.7 2,985,947 - +0.0 2,985,947 - +0.3 2,985,947 - +1.2 2,985,991 + +0.2 2,986,049 + +0.9 2,986,141 + +0.9 2,986,141 + +0.5 2,986,153 + -1.3 2,986,153 + -0.8 2,986,161 - +0.0 2,986,180 + +0.5 2,986,223 - -0.2 2,986,223 - +0.7 2,986,223 - +0.1 2,986,226 + +0.1 2,986,261 + -0.4 2,986,275 + +0.1 2,986,304 + +0.4 2,986,336 + TX73_013595 0.10 +0.8 2,986,372 - TX73_013595 0.14 -0.6 2,986,379 + TX73_013595 0.15 -1.1 2,986,393 - TX73_013595 0.16 -1.5 2,986,420 - TX73_013595 0.19 +0.0 2,986,503 - TX73_013595 0.27 -1.5 2,986,503 - TX73_013595 0.27 -0.6 2,986,505 + TX73_013595 0.28 +0.0 2,986,505 - TX73_013595 0.28 -0.2 2,986,510 + TX73_013595 0.28 +2.8 2,986,513 - TX73_013595 0.28 -0.7 2,986,513 - TX73_013595 0.28 -0.5 2,986,533 - TX73_013595 0.30 +0.3 2,986,533 - TX73_013595 0.30 +0.0 2,986,543 + TX73_013595 0.31 +0.5 2,986,570 - TX73_013595 0.34 -0.8 2,986,615 + TX73_013595 0.39 +0.1 2,986,682 - TX73_013595 0.45 -1.2 2,986,707 - TX73_013595 0.48 +0.5 2,986,725 + TX73_013595 0.50 -0.5 2,986,725 + TX73_013595 0.50 -0.6 2,986,785 - TX73_013595 0.56 -0.2 2,986,804 - TX73_013595 0.58 +0.1 2,986,804 - TX73_013595 0.58 +0.8 2,986,845 + TX73_013595 0.62 +0.2 2,986,851 + TX73_013595 0.63 -0.2 2,986,861 + TX73_013595 0.64 +0.9 2,986,913 + TX73_013595 0.69 +0.5 2,986,920 - TX73_013595 0.70 -0.4 2,986,920 - TX73_013595 0.70 -0.4 2,986,939 - TX73_013595 0.72 -0.6 2,986,962 + TX73_013595 0.74 -0.1 2,986,962 + TX73_013595 0.74 +0.6 2,986,970 - TX73_013595 0.75 +0.5 2,987,027 + TX73_013595 0.80 -0.4 2,987,053 + TX73_013595 0.83 -0.1 2,987,055 + TX73_013595 0.83 -0.2 2,987,063 - TX73_013595 0.84 +0.4 2,987,146 + -0.0 2,987,228 + +2.3 2,987,236 - +0.4 2,987,236 - -1.1 2,987,242 - +0.1 2,987,273 - +0.5 2,987,298 - +0.0 2,987,308 - +0.8 2,987,314 - -1.6 2,987,382 - +0.6 2,987,423 + +0.6 2,987,427 - -0.4 2,987,442 - -0.7 2,987,604 + +1.2 2,987,619 - -1.0 2,987,671 - -0.2 2,987,671 - +0.3 2,987,671 - -0.1 2,987,671 - +0.5 2,987,723 - +0.8 2,987,820 + -1.0 2,987,829 + +0.4 2,987,862 + TX73_013600 0.11 -0.9 2,987,862 + TX73_013600 0.11 +0.2 2,987,862 + TX73_013600 0.11 +0.9 2,987,869 + TX73_013600 0.11 -0.4 2,987,870 - TX73_013600 0.11 -3.1 2,987,870 - TX73_013600 0.11 +0.1 2,987,870 - TX73_013600 0.11 +0.6 2,987,874 + TX73_013600 0.11 +0.2 2,987,906 - TX73_013600 0.13 +0.7 2,988,042 + TX73_013600 0.21 +0.5 2,988,047 + TX73_013600 0.22 +0.4 2,988,114 + TX73_013600 0.26 +0.8
Or see this region's nucleotide sequence