Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_008115

Experiment: L-Malic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C); anaerobic
1,755,187	+		TX73_008110	0.33	+0.2
1,755,187	-		TX73_008110	0.33	+0.2
1,755,197	+		TX73_008110	0.34	-0.1
1,755,217	+		TX73_008110	0.36	+0.0
1,755,265	+		TX73_008110	0.40	+0.3
1,755,328	+		TX73_008110	0.45	-0.7
1,755,334	+		TX73_008110	0.45	-0.3
1,755,338	+		TX73_008110	0.46	-0.8
1,755,346	-		TX73_008110	0.46	-0.1
1,755,351	+		TX73_008110	0.47	+0.5
1,755,352	+		TX73_008110	0.47	+0.0
1,755,372	-		TX73_008110	0.48	-0.8
1,755,377	+		TX73_008110	0.49	-0.4
1,755,396	+		TX73_008110	0.50	-0.9
1,755,396	+		TX73_008110	0.50	-0.3
1,755,415	+		TX73_008110	0.52	+0.3
1,755,415	+		TX73_008110	0.52	-0.5
1,755,417	+		TX73_008110	0.52	+0.0
1,755,423	-		TX73_008110	0.53	+0.5
1,755,423	-		TX73_008110	0.53	+0.4
1,755,423	-		TX73_008110	0.53	+0.5
1,755,425	+		TX73_008110	0.53	-0.4
1,755,496	+		TX73_008110	0.59	-0.4
1,755,504	-		TX73_008110	0.59	-0.4
1,755,504	-		TX73_008110	0.59	-1.8
1,755,504	-		TX73_008110	0.59	+1.1
1,755,536	-		TX73_008110	0.62	+0.4
1,755,547	+		TX73_008110	0.63	+0.2
1,755,630	+		TX73_008110	0.70	-0.0
1,755,724	+		TX73_008110	0.78	+0.0
1,755,739	+		TX73_008110	0.79	+0.1
1,755,848	-		TX73_008110	0.88	+0.3
1,755,901	-				-0.6
1,755,927	+				+0.7
1,755,954	+				+0.6
1,755,962	+				-1.0
1,755,962	+				-1.8
1,755,962	+				+0.0
1,755,970	-				-0.1
1,755,970	-				+0.1
1,755,984	+				-0.3
1,756,007	+				-0.6
1,756,014	-				-0.8
1,756,019	+				+0.4
1,756,081	-				+0.1
1,756,188	-				-1.1
1,756,211	+				+0.5
1,756,221	+				-0.1
1,756,225	+				+0.8
1,756,238	-				-0.9
1,756,275	+				+0.5
1,756,275	+				+0.7
1,756,283	-				-0.3
1,756,293	-				-0.5
1,756,420	+				-0.3
1,756,478	-		TX73_008115	0.11	+0.4
1,756,495	-		TX73_008115	0.11	+0.6
1,756,500	-		TX73_008115	0.11	-0.7
1,756,745	+		TX73_008115	0.19	-0.9
1,756,775	-		TX73_008115	0.20	-0.3
1,756,788	-		TX73_008115	0.21	-0.2
1,756,795	+		TX73_008115	0.21	+0.4
1,756,847	-		TX73_008115	0.23	+0.4
1,756,857	-		TX73_008115	0.23	-0.4
1,756,881	+		TX73_008115	0.24	-0.4
1,756,914	-		TX73_008115	0.25	+0.3
1,757,005	+		TX73_008115	0.28	-0.0
1,757,104	+		TX73_008115	0.31	-0.9
1,757,127	-		TX73_008115	0.32	+0.4
1,757,151	-		TX73_008115	0.33	+1.3
1,757,154	+		TX73_008115	0.33	+0.4
1,757,164	+		TX73_008115	0.33	-0.9
1,757,189	+		TX73_008115	0.34	+0.4
1,757,238	+		TX73_008115	0.36	-0.4
1,757,257	+		TX73_008115	0.36	-0.6
1,757,265	-		TX73_008115	0.37	-0.2
1,757,265	-		TX73_008115	0.37	+1.0
1,757,270	-		TX73_008115	0.37	-0.7
1,757,432	+		TX73_008115	0.42	-0.7
1,757,440	-		TX73_008115	0.43	+0.2
1,757,538	+		TX73_008115	0.46	+0.6
1,757,563	-		TX73_008115	0.47	-1.0
1,757,579	-		TX73_008115	0.47	+0.1
1,757,579	-		TX73_008115	0.47	-0.2
1,757,586	-		TX73_008115	0.47	-1.4
1,757,590	-		TX73_008115	0.48	-1.0
1,757,641	+		TX73_008115	0.49	-0.1
1,757,704	+		TX73_008115	0.51	+0.2
1,757,730	-		TX73_008115	0.52	+0.7
1,757,793	-		TX73_008115	0.54	-1.3
1,757,802	+		TX73_008115	0.55	-0.2
1,757,815	-		TX73_008115	0.55	+0.1
1,757,854	-		TX73_008115	0.56	-0.3
1,757,856	+		TX73_008115	0.56	-0.9
1,757,882	+		TX73_008115	0.57	+0.9
1,757,885	+		TX73_008115	0.57	-0.8
1,757,890	-		TX73_008115	0.57	-0.1
1,757,890	-		TX73_008115	0.57	-1.1
1,757,893	-		TX73_008115	0.58	+1.0
1,758,020	+		TX73_008115	0.62	-0.8
1,758,035	+		TX73_008115	0.62	-0.8
1,758,052	-		TX73_008115	0.63	+1.0
1,758,100	+		TX73_008115	0.64	-0.4
1,758,135	+		TX73_008115	0.66	+0.3
1,758,143	-		TX73_008115	0.66	+0.3
1,758,143	-		TX73_008115	0.66	+1.1
1,758,215	+		TX73_008115	0.68	+0.6
1,758,223	-		TX73_008115	0.69	+0.1
1,758,232	-		TX73_008115	0.69	+0.3
1,758,232	-		TX73_008115	0.69	-1.1
1,758,238	+		TX73_008115	0.69	-0.2
1,758,248	+		TX73_008115	0.69	-0.3
1,758,292	-		TX73_008115	0.71	+0.1
1,758,300	-		TX73_008115	0.71	+0.0
1,758,424	+		TX73_008115	0.75	-0.5
1,758,468	+		TX73_008115	0.77	-0.4
1,758,524	+		TX73_008115	0.79	+1.0
1,758,629	+		TX73_008115	0.82	-0.1
1,758,629	+		TX73_008115	0.82	-0.5
1,758,696	-		TX73_008115	0.84	-0.1
1,758,709	-		TX73_008115	0.85	-0.8
1,758,749	+		TX73_008115	0.86	+0.1
1,758,757	-		TX73_008115	0.86	-0.1
1,758,802	+		TX73_008115	0.88	-0.4
1,758,818	+		TX73_008115	0.88	-0.6
1,758,825	+		TX73_008115	0.89	+0.3
1,758,862	+		TX73_008115	0.90	-0.1
1,758,875	-				+0.2
1,758,934	-				-0.3
1,758,946	+				-0.1
1,758,954	-				+0.3
1,758,969	+				-0.8
1,758,992	-				-0.8
1,758,995	+				-1.9
1,759,006	+				-0.4
1,759,014	-				+0.5
1,759,047	+				-0.7
1,759,052	+				-0.1
1,759,055	-				+0.5
1,759,086	+				-0.4
1,759,094	-				+0.6
1,759,108	+				+0.7
1,759,116	-				-0.2
1,759,121	-				-0.8
1,759,202	-				+0.4
1,759,260	+				-0.5
1,759,307	-				+0.2
1,759,417	-		TX73_008120	0.16	-0.5
1,759,438	+		TX73_008120	0.19	+1.0
1,759,443	+		TX73_008120	0.20	-1.2
1,759,446	-		TX73_008120	0.21	-0.2
1,759,448	+		TX73_008120	0.21	+0.4
1,759,482	-		TX73_008120	0.26	+0.5
1,759,484	-		TX73_008120	0.26	+0.9
1,759,517	+		TX73_008120	0.31	+0.1
1,759,517	+		TX73_008120	0.31	+0.3
1,759,547	+		TX73_008120	0.36	-0.3
1,759,552	+		TX73_008120	0.37	-1.1
1,759,850	-		TX73_008120	0.83	+0.6
1,759,905	+				+0.5
1,759,952	-				-0.8
1,759,991	-				+0.2
1,760,056	-				+0.3