Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_006080

Experiment: Fumarate (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fumarate (C); anaerobic
1,295,664	-				-0.2
1,295,683	+				-1.8
1,295,768	-				+0.3
1,295,788	+				+0.1
1,295,790	+				+0.4
1,295,794	-		TX73_006075	0.10	+0.4
1,295,797	+		TX73_006075	0.11	-0.2
1,295,839	+		TX73_006075	0.15	+0.4
1,295,856	+		TX73_006075	0.17	-0.2
1,295,886	-		TX73_006075	0.20	+0.6
1,295,907	-		TX73_006075	0.23	+0.9
1,295,907	-		TX73_006075	0.23	-2.0
1,295,917	+		TX73_006075	0.24	+0.6
1,295,917	+		TX73_006075	0.24	-0.3
1,295,942	+		TX73_006075	0.26	+0.8
1,295,950	-		TX73_006075	0.27	+0.6
1,295,954	-		TX73_006075	0.28	+0.8
1,295,958	+		TX73_006075	0.28	-2.2
1,295,960	-		TX73_006075	0.28	+1.2
1,295,963	+		TX73_006075	0.29	+0.1
1,295,963	+		TX73_006075	0.29	+0.9
1,295,966	-		TX73_006075	0.29	+0.4
1,295,980	+		TX73_006075	0.30	+1.0
1,295,989	+		TX73_006075	0.31	+0.3
1,295,997	-		TX73_006075	0.32	-0.2
1,296,009	-		TX73_006075	0.33	-1.3
1,296,011	+		TX73_006075	0.34	+0.3
1,296,019	-		TX73_006075	0.35	-0.3
1,296,068	+		TX73_006075	0.40	+0.7
1,296,117	+		TX73_006075	0.45	+0.8
1,296,123	-		TX73_006075	0.46	+0.7
1,296,128	-		TX73_006075	0.46	+0.4
1,296,135	+		TX73_006075	0.47	-0.2
1,296,138	-		TX73_006075	0.47	+2.3
1,296,179	-		TX73_006075	0.52	-0.4
1,296,202	-		TX73_006075	0.54	+0.2
1,296,225	+		TX73_006075	0.57	+0.9
1,296,249	+		TX73_006075	0.59	+0.7
1,296,250	-		TX73_006075	0.59	-0.5
1,296,250	-		TX73_006075	0.59	+1.1
1,296,257	-		TX73_006075	0.60	+1.3
1,296,271	+		TX73_006075	0.62	+0.5
1,296,299	-		TX73_006075	0.65	+0.5
1,296,332	+		TX73_006075	0.68	+0.4
1,296,340	-		TX73_006075	0.69	-1.5
1,296,342	-		TX73_006075	0.69	+1.1
1,296,355	+		TX73_006075	0.71	+0.0
1,296,411	+		TX73_006075	0.77	-0.4
1,296,424	-		TX73_006075	0.78	+0.8
1,296,504	-		TX73_006075	0.86	+1.3
1,296,523	+		TX73_006075	0.89	+0.5
1,296,531	+		TX73_006075	0.89	+0.3
1,296,537	-				+0.9
1,296,564	+				-0.9
1,296,564	+				+0.6
1,296,596	+				-0.5
1,296,621	-				+0.8
1,296,625	-				+1.4
1,296,626	-				+0.1
1,296,658	-				+0.4
1,296,667	+				+0.6
1,296,672	+				-0.4
1,296,679	-				-0.1
1,296,698	+				-2.3
1,296,698	+				-0.6
1,296,701	-				+1.2
1,296,706	-				+0.3
1,296,724	-				+0.4
1,296,730	+		TX73_006080	0.10	+1.0
1,296,734	-		TX73_006080	0.10	+1.4
1,296,737	+		TX73_006080	0.11	+0.3
1,296,737	+		TX73_006080	0.11	+2.3
1,296,798	+		TX73_006080	0.17	+0.1
1,296,816	-		TX73_006080	0.19	+0.6
1,296,816	-		TX73_006080	0.19	+1.0
1,296,826	+		TX73_006080	0.20	-0.8
1,296,826	+		TX73_006080	0.20	+0.2
1,296,840	-		TX73_006080	0.21	+0.5
1,296,841	-		TX73_006080	0.21	-0.1
1,296,873	-		TX73_006080	0.24	+0.3
1,296,875	+		TX73_006080	0.24	+0.8
1,296,878	-		TX73_006080	0.25	+0.0
1,296,940	+		TX73_006080	0.31	-0.2
1,296,952	+		TX73_006080	0.32	+0.5
1,296,979	+		TX73_006080	0.35	-0.5
1,297,019	+		TX73_006080	0.39	-0.5
1,297,022	-		TX73_006080	0.39	-0.0
1,297,024	+		TX73_006080	0.39	+0.4
1,297,024	+		TX73_006080	0.39	+0.3
1,297,100	-		TX73_006080	0.47	+0.3
1,297,113	-		TX73_006080	0.48	+0.3
1,297,128	-		TX73_006080	0.50	+0.2
1,297,133	-		TX73_006080	0.50	+0.8
1,297,134	+		TX73_006080	0.50	+0.6
1,297,163	-		TX73_006080	0.53	+0.8
1,297,188	+		TX73_006080	0.56	+0.6
1,297,193	-		TX73_006080	0.56	-1.4
1,297,196	-		TX73_006080	0.56	+0.2
1,297,209	+		TX73_006080	0.58	+0.2
1,297,212	-		TX73_006080	0.58	+1.5
1,297,214	+		TX73_006080	0.58	+0.6
1,297,217	-		TX73_006080	0.59	+0.3
1,297,222	+		TX73_006080	0.59	+0.4
1,297,224	+		TX73_006080	0.59	-0.1
1,297,232	+		TX73_006080	0.60	+0.2
1,297,263	+		TX73_006080	0.63	+1.0
1,297,268	-		TX73_006080	0.64	+0.2
1,297,268	-		TX73_006080	0.64	+0.3
1,297,309	-		TX73_006080	0.68	-2.1
1,297,326	+		TX73_006080	0.69	+0.1
1,297,351	+		TX73_006080	0.72	+0.7
1,297,366	+		TX73_006080	0.73	-1.2
1,297,379	-		TX73_006080	0.75	+0.3
1,297,411	+		TX73_006080	0.78	-0.2
1,297,419	+		TX73_006080	0.79	-1.1
1,297,434	+		TX73_006080	0.80	-0.1
1,297,434	+		TX73_006080	0.80	-0.8
1,297,442	-		TX73_006080	0.81	-0.8
1,297,493	-		TX73_006080	0.86	+0.6
1,297,495	+		TX73_006080	0.86	+0.8
1,297,499	+		TX73_006080	0.87	+0.2
1,297,514	+		TX73_006080	0.88	-0.8
1,297,514	+		TX73_006080	0.88	+0.9
1,297,569	-				-0.4
1,297,576	+				-1.0
1,297,582	-				-0.4
1,297,584	-				-1.3
1,297,589	+				-0.2
1,297,599	+				-1.9
1,297,609	+				-0.5
1,297,617	+				-0.2
1,297,629	+				-0.4
1,297,636	-				-0.7
1,297,638	+				-0.5
1,297,641	+				+0.8
1,297,641	+				+0.5
1,297,645	+				-1.9
1,297,646	+				-0.3
1,297,653	-				-0.7
1,297,660	+				-0.3
1,297,689	+				-0.0
1,297,689	+				-0.6
1,297,689	+				+0.8
1,297,697	-				-0.5
1,297,697	-				-0.5
1,297,697	-				+0.0
1,297,729	-				-0.2
1,297,782	+				-0.1
1,297,784	+				-0.7
1,297,790	-				-0.3
1,297,794	+				-2.0
1,297,801	-				-0.5
1,297,822	+				-0.2
1,297,822	-				-1.0
1,297,866	-				-0.1
1,297,866	-				-1.4
1,297,879	+				+0.6
1,297,879	+				-0.3
1,297,887	-				-0.6
1,297,907	+				+0.3
1,297,907	+				-1.1
1,297,915	-				-0.5
1,297,943	+		TX73_006085	0.12	-0.1
1,297,950	+		TX73_006085	0.14	+0.0
1,297,950	+		TX73_006085	0.14	+0.1
1,297,950	+		TX73_006085	0.14	-0.9
1,297,950	+		TX73_006085	0.14	-0.8
1,297,950	+		TX73_006085	0.14	-1.0
1,297,950	+		TX73_006085	0.14	+0.8
1,297,950	+		TX73_006085	0.14	-1.2
1,297,951	+		TX73_006085	0.14	-0.6
1,297,958	-		TX73_006085	0.15	-0.4
1,297,958	-		TX73_006085	0.15	+0.9
1,297,958	-		TX73_006085	0.15	+0.2
1,297,997	-		TX73_006085	0.21	-1.6
1,298,041	-		TX73_006085	0.28	-0.6
1,298,042	-		TX73_006085	0.29	+0.2
1,298,079	+		TX73_006085	0.35	-1.7
1,298,079	+		TX73_006085	0.35	-0.1
1,298,123	-		TX73_006085	0.42	-2.1
1,298,139	-		TX73_006085	0.44	+0.0
1,298,139	-		TX73_006085	0.44	+0.1
1,298,160	-		TX73_006085	0.48	+0.6
1,298,184	+		TX73_006085	0.52	-0.1
1,298,184	+		TX73_006085	0.52	-1.5
1,298,217	-		TX73_006085	0.57	-0.5
1,298,220	-		TX73_006085	0.58	-0.2
1,298,220	-		TX73_006085	0.58	-0.1
1,298,249	+		TX73_006085	0.62	-1.1
1,298,263	-		TX73_006085	0.65	-0.5
1,298,282	-		TX73_006085	0.68	-0.4
1,298,297	+		TX73_006085	0.70	-1.0
1,298,303	+		TX73_006085	0.71	-1.1
1,298,317	-		TX73_006085	0.74	-0.4
1,298,353	+		TX73_006085	0.79	-0.3
1,298,375	+		TX73_006085	0.83	-1.2
1,298,407	+		TX73_006085	0.88	-0.2
1,298,434	+				-0.1
1,298,440	+				-1.3
1,298,445	+				-1.5
1,298,445	+				-1.0
1,298,460	+				-2.3
1,298,460	+				-1.3
1,298,460	+				-2.4
1,298,465	+				-0.4
1,298,468	-				-0.8
1,298,468	-				+1.0
1,298,468	-				-1.3
1,298,468	-				+1.8
1,298,468	-				-2.0
1,298,472	+				-2.2
1,298,472	+				+0.4
1,298,548	+				+0.5
1,298,625	+		TX73_006090	0.21	+0.0
1,298,626	-		TX73_006090	0.21	+0.7
1,298,626	-		TX73_006090	0.21	-1.5
1,298,633	+		TX73_006090	0.22	-0.7