Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_021925

Experiment: Citraconic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citraconic (C); anaerobic
4,771,452	-		TX73_021915	0.48	-0.8
4,771,455	+		TX73_021915	0.49	+1.0
4,771,465	+		TX73_021915	0.52	-2.5
4,771,535	-		TX73_021915	0.72	+0.4
4,771,543	-		TX73_021915	0.74	+0.1
4,771,550	+		TX73_021915	0.76	+0.8
4,771,591	+		TX73_021915	0.88	-0.5
4,771,599	-				+1.1
4,771,622	+				+1.7
4,771,731	-				-1.2
4,771,742	-				+1.0
4,771,815	+				+0.6
4,771,992	+				+0.4
4,771,994	-				+0.7
4,772,030	-				+1.0
4,772,448	+				-0.6
4,772,453	+				+0.4
4,772,522	-				-0.1
4,772,548	+				-0.2
4,772,551	-				-0.0
4,772,622	+				+1.1
4,772,626	-				-0.0
4,772,638	+				+1.6
4,772,758	-		TX73_021925	0.14	+1.6
4,772,797	-		TX73_021925	0.16	+1.0
4,772,821	-		TX73_021925	0.17	+1.0
4,772,876	-		TX73_021925	0.20	-1.5
4,772,892	+		TX73_021925	0.21	-0.3
4,772,905	-		TX73_021925	0.21	+0.7
4,772,921	+		TX73_021925	0.22	-0.5
4,772,929	-		TX73_021925	0.23	+0.2
4,772,935	+		TX73_021925	0.23	-0.2
4,772,987	-		TX73_021925	0.25	-0.8
4,773,022	+		TX73_021925	0.27	+0.4
4,773,032	+		TX73_021925	0.27	+0.9
4,773,032	+		TX73_021925	0.27	+0.3
4,773,032	+		TX73_021925	0.27	+0.9
4,773,040	-		TX73_021925	0.28	+0.4
4,773,042	+		TX73_021925	0.28	+0.2
4,773,050	-		TX73_021925	0.28	+0.2
4,773,125	+		TX73_021925	0.32	-0.0
4,773,143	-		TX73_021925	0.33	+0.5
4,773,145	+		TX73_021925	0.33	+0.3
4,773,145	+		TX73_021925	0.33	+1.2
4,773,145	+		TX73_021925	0.33	+0.7
4,773,153	-		TX73_021925	0.33	-0.3
4,773,200	-		TX73_021925	0.35	+0.9
4,773,219	-		TX73_021925	0.36	-0.5
4,773,235	-		TX73_021925	0.37	+0.1
4,773,235	-		TX73_021925	0.37	+0.9
4,773,269	+		TX73_021925	0.39	-0.1
4,773,293	+		TX73_021925	0.40	+0.9
4,773,299	+		TX73_021925	0.40	+0.1
4,773,307	-		TX73_021925	0.40	+0.7
4,773,307	-		TX73_021925	0.40	-0.7
4,773,307	-		TX73_021925	0.40	-0.0
4,773,312	-		TX73_021925	0.41	-0.1
4,773,363	-		TX73_021925	0.43	+0.6
4,773,374	-		TX73_021925	0.44	-0.4
4,773,388	-		TX73_021925	0.44	-0.1
4,773,410	+		TX73_021925	0.45	-0.4
4,773,410	+		TX73_021925	0.45	+0.4
4,773,410	+		TX73_021925	0.45	+0.9
4,773,410	+		TX73_021925	0.45	+0.4
4,773,438	-		TX73_021925	0.47	+0.2
4,773,446	-		TX73_021925	0.47	+1.6
4,773,497	+		TX73_021925	0.49	+0.1
4,773,507	+		TX73_021925	0.50	+0.2
4,773,507	+		TX73_021925	0.50	-2.0
4,773,508	+		TX73_021925	0.50	+0.6
4,773,605	+		TX73_021925	0.55	+0.8
4,773,605	+		TX73_021925	0.55	+0.3
4,773,613	-		TX73_021925	0.55	-1.7
4,773,613	-		TX73_021925	0.55	-0.0
4,773,625	+		TX73_021925	0.56	-1.0
4,773,625	+		TX73_021925	0.56	-0.5
4,773,633	-		TX73_021925	0.56	+0.3
4,773,633	-		TX73_021925	0.56	+1.1
4,773,633	-		TX73_021925	0.56	+0.1
4,773,646	+		TX73_021925	0.57	-1.0
4,773,657	+		TX73_021925	0.57	-0.1
4,773,665	-		TX73_021925	0.57	+0.1
4,773,666	-		TX73_021925	0.57	-0.4
4,773,697	+		TX73_021925	0.59	-0.1
4,773,822	-		TX73_021925	0.65	+0.1
4,773,839	-		TX73_021925	0.66	-0.5
4,773,842	+		TX73_021925	0.66	+0.7
4,773,871	+		TX73_021925	0.67	-0.2
4,773,871	+		TX73_021925	0.67	-0.2
4,773,937	+		TX73_021925	0.70	-0.0
4,773,966	-		TX73_021925	0.72	-2.0
4,773,990	-		TX73_021925	0.73	+0.8
4,773,997	+		TX73_021925	0.73	+0.8
4,774,004	+		TX73_021925	0.73	-0.5
4,774,009	+		TX73_021925	0.74	-1.1
4,774,058	-		TX73_021925	0.76	-0.3
4,774,058	-		TX73_021925	0.76	+0.3
4,774,074	+		TX73_021925	0.77	-0.7
4,774,082	-		TX73_021925	0.77	-0.2
4,774,116	+		TX73_021925	0.79	-0.4
4,774,120	+		TX73_021925	0.79	+1.2
4,774,120	+		TX73_021925	0.79	-1.0
4,774,203	+		TX73_021925	0.83	+0.6
4,774,203	+		TX73_021925	0.83	-0.6
4,774,203	+		TX73_021925	0.83	+2.0
4,774,231	-		TX73_021925	0.84	+0.9
4,774,234	+		TX73_021925	0.84	-0.2
4,774,265	+		TX73_021925	0.86	+0.8
4,774,307	-		TX73_021925	0.88	-0.2
4,774,323	+		TX73_021925	0.89	-0.4
4,774,331	-		TX73_021925	0.89	-0.1
4,774,341	-		TX73_021925	0.89	+0.9
4,774,355	+				+0.7
4,774,355	+				-0.4
4,774,358	-				+0.7
4,774,363	-				-0.9
4,774,363	-				-0.1
4,774,368	-				+0.1
4,774,386	+				+1.2
4,774,412	-				-1.0
4,774,427	+				+1.3
4,774,427	+				-0.6
4,774,434	-				+0.7
4,774,435	-				+3.0
4,774,435	-				+0.1
4,774,440	+				-2.3
4,774,482	+				-0.3
4,774,504	-				+0.2
4,774,516	-				-0.4
4,774,525	+				+0.1
4,774,529	+				+0.2
4,774,548	+				-0.7
4,774,595	+				+0.3
4,774,610	-				+0.3
4,774,640	+				-0.5
4,774,642	-				+0.2
4,774,649	+				+0.1
4,774,686	-				-0.8
4,774,697	-				+0.1
4,774,707	+				+0.2
4,774,759	+		TX73_021930	0.19	-0.0
4,774,798	+		TX73_021930	0.31	+0.5
4,774,803	+		TX73_021930	0.32	-0.6
4,774,824	-		TX73_021930	0.39	-0.4
4,774,945	+		TX73_021930	0.76	+0.7
4,774,964	+		TX73_021930	0.81	+0.4
4,774,979	-		TX73_021930	0.86	+0.1
4,775,000	+				-0.4
4,775,026	-				-0.0
4,775,055	-				+0.3
4,775,118	-				-0.2
4,775,159	+				-0.4
4,775,171	-		TX73_021935	0.11	-1.2
4,775,186	-		TX73_021935	0.12	-0.2
4,775,197	+		TX73_021935	0.13	-0.2
4,775,222	-		TX73_021935	0.15	+0.4
4,775,246	+		TX73_021935	0.17	+0.5
4,775,254	-		TX73_021935	0.17	-0.2
4,775,275	+		TX73_021935	0.19	+0.9
4,775,280	-		TX73_021935	0.20	-0.3
4,775,285	-		TX73_021935	0.20	+0.3
4,775,311	-		TX73_021935	0.22	-1.5
4,775,311	-		TX73_021935	0.22	-0.2
4,775,311	-		TX73_021935	0.22	-0.0
4,775,322	+		TX73_021935	0.23	-1.1
4,775,327	+		TX73_021935	0.23	+0.9
4,775,330	-		TX73_021935	0.24	-0.2
4,775,348	+		TX73_021935	0.25	-0.2
4,775,380	+		TX73_021935	0.28	-0.6
4,775,427	+		TX73_021935	0.31	+0.2
4,775,435	-		TX73_021935	0.32	+0.4
4,775,462	+		TX73_021935	0.34	+0.3
4,775,465	-		TX73_021935	0.34	-0.9
4,775,465	-		TX73_021935	0.34	+0.7
4,775,465	-		TX73_021935	0.34	-0.9
4,775,514	+		TX73_021935	0.38	-0.6
4,775,535	-		TX73_021935	0.40	+0.4