Experiment: Citraconic (C); anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_024740 and TX73_024745 are separated by 832 nucleotides TX73_024745 and TX73_024750 are separated by 276 nucleotides TX73_024750 and TX73_024755 are separated by 196 nucleotides
TX73_024740: TX73_024740 - hypothetical protein, at 5,372,943 to 5,373,476
_024740
TX73_024745: TX73_024745 - hypothetical protein, at 5,374,309 to 5,374,443
_024745
TX73_024750: TX73_024750 - tRNA-Gly, at 5,374,720 to 5,374,793
_024750
TX73_024755: TX73_024755 - methylated-DNA--[protein]-cysteine S-methyltransferase, at 5,374,990 to 5,375,571
_024755
Position (kb) 5374
5375 Strain fitness (log2 ratio) -1
0
1 at 5373.310 kb on + strand, within TX73_024740 at 5373.333 kb on + strand, within TX73_024740 at 5373.342 kb on - strand, within TX73_024740 at 5373.356 kb on + strand, within TX73_024740 at 5373.401 kb on - strand, within TX73_024740 at 5373.403 kb on + strand, within TX73_024740 at 5373.406 kb on + strand, within TX73_024740 at 5373.414 kb on - strand, within TX73_024740 at 5373.424 kb on + strand at 5373.442 kb on - strand at 5373.462 kb on - strand at 5373.466 kb on - strand at 5373.494 kb on + strand at 5373.502 kb on - strand at 5373.677 kb on + strand at 5373.738 kb on - strand at 5373.771 kb on - strand at 5373.771 kb on - strand at 5373.798 kb on + strand at 5373.798 kb on + strand at 5373.798 kb on + strand at 5373.798 kb on + strand at 5373.798 kb on + strand at 5373.806 kb on - strand at 5373.806 kb on - strand at 5373.806 kb on - strand at 5373.808 kb on - strand at 5373.815 kb on + strand at 5373.815 kb on + strand at 5373.815 kb on + strand at 5373.835 kb on + strand at 5373.840 kb on + strand at 5373.850 kb on - strand at 5373.862 kb on + strand at 5373.871 kb on - strand at 5373.882 kb on - strand at 5373.884 kb on + strand at 5373.887 kb on - strand at 5373.951 kb on + strand at 5374.017 kb on - strand at 5374.019 kb on + strand at 5374.019 kb on - strand at 5374.035 kb on + strand at 5374.043 kb on - strand at 5374.073 kb on + strand at 5374.105 kb on - strand at 5374.136 kb on + strand at 5374.149 kb on + strand at 5374.152 kb on - strand at 5374.157 kb on - strand at 5374.178 kb on + strand at 5374.226 kb on - strand at 5374.238 kb on - strand at 5374.238 kb on - strand at 5374.251 kb on + strand at 5374.251 kb on + strand at 5374.251 kb on + strand at 5374.268 kb on + strand at 5374.274 kb on + strand at 5374.282 kb on - strand at 5374.282 kb on - strand at 5374.286 kb on + strand at 5374.295 kb on + strand at 5374.357 kb on + strand, within TX73_024745 at 5374.375 kb on - strand, within TX73_024745 at 5374.412 kb on + strand, within TX73_024745 at 5374.530 kb on - strand at 5374.543 kb on + strand at 5374.565 kb on + strand at 5374.570 kb on + strand at 5374.575 kb on + strand at 5374.578 kb on - strand at 5374.578 kb on - strand at 5374.583 kb on - strand at 5374.583 kb on - strand at 5374.583 kb on - strand at 5374.628 kb on - strand at 5374.633 kb on - strand at 5374.641 kb on + strand at 5374.666 kb on + strand at 5374.674 kb on - strand at 5374.689 kb on + strand at 5374.697 kb on - strand at 5374.702 kb on - strand at 5374.703 kb on - strand at 5374.710 kb on + strand at 5374.714 kb on - strand at 5374.716 kb on + strand at 5374.735 kb on - strand, within TX73_024750 at 5374.745 kb on + strand, within TX73_024750 at 5374.745 kb on + strand, within TX73_024750 at 5374.745 kb on + strand, within TX73_024750 at 5374.745 kb on + strand, within TX73_024750 at 5374.745 kb on + strand, within TX73_024750 at 5374.753 kb on - strand, within TX73_024750 at 5374.753 kb on - strand, within TX73_024750 at 5374.755 kb on + strand, within TX73_024750 at 5374.797 kb on + strand at 5374.802 kb on + strand at 5374.805 kb on - strand at 5374.812 kb on - strand at 5374.822 kb on + strand at 5374.830 kb on - strand at 5374.831 kb on - strand at 5374.832 kb on + strand at 5374.832 kb on + strand at 5374.851 kb on + strand at 5374.851 kb on + strand at 5374.883 kb on + strand at 5374.888 kb on + strand at 5374.920 kb on - strand at 5374.920 kb on - strand at 5374.929 kb on - strand at 5374.978 kb on - strand at 5374.981 kb on + strand at 5374.986 kb on + strand at 5375.000 kb on - strand at 5375.000 kb on - strand at 5375.002 kb on + strand at 5375.002 kb on + strand at 5375.005 kb on - strand at 5375.010 kb on - strand at 5375.010 kb on - strand at 5375.010 kb on - strand at 5375.010 kb on - strand at 5375.010 kb on - strand at 5375.013 kb on + strand at 5375.013 kb on + strand at 5375.021 kb on - strand at 5375.028 kb on - strand at 5375.044 kb on + strand at 5375.052 kb on - strand, within TX73_024755 at 5375.062 kb on - strand, within TX73_024755 at 5375.095 kb on + strand, within TX73_024755 at 5375.096 kb on - strand, within TX73_024755 at 5375.103 kb on - strand, within TX73_024755 at 5375.135 kb on + strand, within TX73_024755 at 5375.135 kb on + strand, within TX73_024755 at 5375.135 kb on + strand, within TX73_024755 at 5375.137 kb on + strand, within TX73_024755 at 5375.145 kb on - strand, within TX73_024755 at 5375.145 kb on - strand, within TX73_024755 at 5375.154 kb on + strand, within TX73_024755 at 5375.154 kb on + strand, within TX73_024755 at 5375.154 kb on + strand, within TX73_024755 at 5375.162 kb on - strand, within TX73_024755 at 5375.162 kb on - strand, within TX73_024755 at 5375.229 kb on + strand, within TX73_024755 at 5375.290 kb on - strand, within TX73_024755 at 5375.302 kb on + strand, within TX73_024755 at 5375.302 kb on + strand, within TX73_024755 at 5375.305 kb on - strand, within TX73_024755 at 5375.315 kb on - strand, within TX73_024755 at 5375.339 kb on + strand, within TX73_024755 at 5375.363 kb on + strand, within TX73_024755 at 5375.369 kb on - strand, within TX73_024755 at 5375.380 kb on + strand, within TX73_024755 at 5375.392 kb on - strand, within TX73_024755 at 5375.402 kb on - strand, within TX73_024755 at 5375.436 kb on - strand, within TX73_024755
Per-strain Table
Position Strand Gene LocusTag Fraction Citraconic (C); anaerobic remove 5,373,310 + TX73_024740 0.69 -0.2 5,373,333 + TX73_024740 0.73 -0.7 5,373,342 - TX73_024740 0.75 -0.1 5,373,356 + TX73_024740 0.77 +0.5 5,373,401 - TX73_024740 0.86 -0.9 5,373,403 + TX73_024740 0.86 -0.2 5,373,406 + TX73_024740 0.87 +0.3 5,373,414 - TX73_024740 0.88 +0.4 5,373,424 + -0.9 5,373,442 - +0.2 5,373,462 - -0.5 5,373,466 - +0.6 5,373,494 + +0.0 5,373,502 - -1.1 5,373,677 + -0.1 5,373,738 - +1.4 5,373,771 - -0.2 5,373,771 - -0.7 5,373,798 + -0.1 5,373,798 + +0.6 5,373,798 + +0.9 5,373,798 + -0.3 5,373,798 + +0.2 5,373,806 - -0.3 5,373,806 - +0.4 5,373,806 - +0.4 5,373,808 - +0.0 5,373,815 + +1.2 5,373,815 + -0.3 5,373,815 + -0.5 5,373,835 + -0.2 5,373,840 + +0.9 5,373,850 - +0.0 5,373,862 + +0.1 5,373,871 - +0.6 5,373,882 - +0.6 5,373,884 + -0.3 5,373,887 - +0.2 5,373,951 + -0.3 5,374,017 - +0.5 5,374,019 + -0.5 5,374,019 - -1.3 5,374,035 + +0.6 5,374,043 - +0.2 5,374,073 + +0.7 5,374,105 - -0.4 5,374,136 + -0.2 5,374,149 + +0.7 5,374,152 - +0.6 5,374,157 - +0.4 5,374,178 + +0.3 5,374,226 - +0.2 5,374,238 - +0.1 5,374,238 - -0.3 5,374,251 + +0.3 5,374,251 + +0.5 5,374,251 + -0.6 5,374,268 + +0.9 5,374,274 + +0.2 5,374,282 - -0.0 5,374,282 - +0.4 5,374,286 + -0.6 5,374,295 + -0.3 5,374,357 + TX73_024745 0.36 +0.4 5,374,375 - TX73_024745 0.49 +0.4 5,374,412 + TX73_024745 0.76 +1.0 5,374,530 - -0.2 5,374,543 + +0.3 5,374,565 + -0.4 5,374,570 + +0.6 5,374,575 + +0.9 5,374,578 - +0.3 5,374,578 - -0.3 5,374,583 - -0.4 5,374,583 - -0.3 5,374,583 - +0.2 5,374,628 - +0.4 5,374,633 - +0.9 5,374,641 + +0.2 5,374,666 + +0.4 5,374,674 - -1.2 5,374,689 + +0.3 5,374,697 - +0.7 5,374,702 - +0.3 5,374,703 - +0.8 5,374,710 + +1.4 5,374,714 - -0.3 5,374,716 + +1.1 5,374,735 - TX73_024750 0.20 +0.9 5,374,745 + TX73_024750 0.34 -0.3 5,374,745 + TX73_024750 0.34 +0.3 5,374,745 + TX73_024750 0.34 +0.2 5,374,745 + TX73_024750 0.34 -1.1 5,374,745 + TX73_024750 0.34 +1.4 5,374,753 - TX73_024750 0.45 -0.2 5,374,753 - TX73_024750 0.45 +0.3 5,374,755 + TX73_024750 0.47 +0.6 5,374,797 + +0.3 5,374,802 + -0.9 5,374,805 - -0.2 5,374,812 - +1.2 5,374,822 + +0.1 5,374,830 - -0.6 5,374,831 - +1.1 5,374,832 + -0.1 5,374,832 + -0.3 5,374,851 + -0.3 5,374,851 + -0.2 5,374,883 + -0.2 5,374,888 + -0.7 5,374,920 - -0.3 5,374,920 - -1.0 5,374,929 - -0.6 5,374,978 - -0.3 5,374,981 + -0.1 5,374,986 + +0.2 5,375,000 - +1.0 5,375,000 - +0.2 5,375,002 + -0.2 5,375,002 + -0.9 5,375,005 - -0.0 5,375,010 - -0.3 5,375,010 - +0.4 5,375,010 - +0.4 5,375,010 - -0.0 5,375,010 - +0.4 5,375,013 + -0.5 5,375,013 + -0.1 5,375,021 - +0.1 5,375,028 - +0.9 5,375,044 + +0.9 5,375,052 - TX73_024755 0.11 +1.4 5,375,062 - TX73_024755 0.12 +0.7 5,375,095 + TX73_024755 0.18 -1.1 5,375,096 - TX73_024755 0.18 +1.0 5,375,103 - TX73_024755 0.19 -0.1 5,375,135 + TX73_024755 0.25 +0.0 5,375,135 + TX73_024755 0.25 -0.7 5,375,135 + TX73_024755 0.25 -1.0 5,375,137 + TX73_024755 0.25 -0.4 5,375,145 - TX73_024755 0.27 -0.2 5,375,145 - TX73_024755 0.27 -1.3 5,375,154 + TX73_024755 0.28 +0.5 5,375,154 + TX73_024755 0.28 +0.2 5,375,154 + TX73_024755 0.28 +0.4 5,375,162 - TX73_024755 0.30 -1.2 5,375,162 - TX73_024755 0.30 -0.1 5,375,229 + TX73_024755 0.41 +0.4 5,375,290 - TX73_024755 0.52 +1.2 5,375,302 + TX73_024755 0.54 -0.5 5,375,302 + TX73_024755 0.54 +0.2 5,375,305 - TX73_024755 0.54 +0.4 5,375,315 - TX73_024755 0.56 -0.5 5,375,339 + TX73_024755 0.60 +0.1 5,375,363 + TX73_024755 0.64 +0.2 5,375,369 - TX73_024755 0.65 +0.7 5,375,380 + TX73_024755 0.67 -0.4 5,375,392 - TX73_024755 0.69 -1.0 5,375,402 - TX73_024755 0.71 -0.8 5,375,436 - TX73_024755 0.77 +0.3
Or see this region's nucleotide sequence