Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_019435

Experiment: Citraconic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citraconic (C); anaerobic
4,243,966	+				+0.8
4,243,985	-				+0.6
4,244,018	-				+0.0
4,244,108	-		TX73_019430	0.16	+2.0
4,244,113	+		TX73_019430	0.17	+0.8
4,244,120	-		TX73_019430	0.18	+1.1
4,244,161	+		TX73_019430	0.22	-0.4
4,244,180	+		TX73_019430	0.24	+0.3
4,244,182	+		TX73_019430	0.25	+0.4
4,244,190	-		TX73_019430	0.25	-0.6
4,244,190	-		TX73_019430	0.25	+0.6
4,244,212	-		TX73_019430	0.28	-0.3
4,244,255	-		TX73_019430	0.33	+0.8
4,244,267	+		TX73_019430	0.34	-0.2
4,244,394	-		TX73_019430	0.49	+0.3
4,244,439	-		TX73_019430	0.54	+0.3
4,244,525	-		TX73_019430	0.64	-1.7
4,244,526	-		TX73_019430	0.64	+0.8
4,244,565	+		TX73_019430	0.68	+0.7
4,244,605	-		TX73_019430	0.73	+0.2
4,244,682	-		TX73_019430	0.81	+0.2
4,244,797	-				+0.5
4,244,805	+				+0.4
4,244,813	-				-0.0
4,244,816	+				+0.6
4,244,844	+				-1.1
4,245,040	+				+0.3
4,245,048	-				-1.1
4,245,048	-				+0.3
4,245,083	+				+0.3
4,245,126	-		TX73_019435	0.11	+0.8
4,245,128	+		TX73_019435	0.11	-0.2
4,245,165	-		TX73_019435	0.13	+0.2
4,245,176	+		TX73_019435	0.13	-0.2
4,245,212	-		TX73_019435	0.15	+0.5
4,245,224	+		TX73_019435	0.15	-0.5
4,245,273	+		TX73_019435	0.17	+1.1
4,245,358	-		TX73_019435	0.21	+0.6
4,245,391	+		TX73_019435	0.22	+1.3
4,245,399	-		TX73_019435	0.22	+0.3
4,245,446	+		TX73_019435	0.24	+1.0
4,245,501	+		TX73_019435	0.26	-0.7
4,245,530	-		TX73_019435	0.28	+0.0
4,245,601	-		TX73_019435	0.30	-0.5
4,245,605	-		TX73_019435	0.31	-0.7
4,245,654	-		TX73_019435	0.32	+1.0
4,245,737	+		TX73_019435	0.36	+0.0
4,245,750	-		TX73_019435	0.36	-0.9
4,245,750	-		TX73_019435	0.36	+0.5
4,245,750	-		TX73_019435	0.36	-0.5
4,245,768	+		TX73_019435	0.37	-0.3
4,245,776	-		TX73_019435	0.37	+0.1
4,245,779	+		TX73_019435	0.37	-0.3
4,245,781	-		TX73_019435	0.38	-0.2
4,245,795	+		TX73_019435	0.38	+3.3
4,245,858	-		TX73_019435	0.41	+0.7
4,245,886	+		TX73_019435	0.42	-0.5
4,245,888	+		TX73_019435	0.42	+1.3
4,245,896	-		TX73_019435	0.42	+0.7
4,245,984	+		TX73_019435	0.46	-0.7
4,246,006	+		TX73_019435	0.47	+1.1
4,246,014	-		TX73_019435	0.47	+0.5
4,246,068	-		TX73_019435	0.49	-0.3
4,246,128	+		TX73_019435	0.51	+0.2
4,246,136	-		TX73_019435	0.52	+0.5
4,246,141	-		TX73_019435	0.52	+0.4
4,246,141	-		TX73_019435	0.52	-1.7
4,246,163	-		TX73_019435	0.53	-1.0
4,246,196	+		TX73_019435	0.54	-0.4
4,246,204	-		TX73_019435	0.54	+0.2
4,246,276	+		TX73_019435	0.57	+0.6
4,246,328	+		TX73_019435	0.59	-0.4
4,246,359	-		TX73_019435	0.61	+0.3
4,246,389	+		TX73_019435	0.62	-0.2
4,246,392	-		TX73_019435	0.62	-0.3
4,246,436	+		TX73_019435	0.64	+0.4
4,246,452	-		TX73_019435	0.64	+0.5
4,246,464	-		TX73_019435	0.65	-0.3
4,246,469	-		TX73_019435	0.65	+0.7
4,246,500	+		TX73_019435	0.66	+0.4
4,246,541	-		TX73_019435	0.68	+0.4
4,246,576	-		TX73_019435	0.69	+0.5
4,246,705	-		TX73_019435	0.75	+0.6
4,246,737	+		TX73_019435	0.76	-0.4
4,246,752	+		TX73_019435	0.76	+1.0
4,246,760	-		TX73_019435	0.77	+0.1
4,246,779	-		TX73_019435	0.77	-0.8
4,246,789	-		TX73_019435	0.78	-0.8
4,246,789	-		TX73_019435	0.78	+0.9
4,246,789	-		TX73_019435	0.78	+0.1
4,246,805	+		TX73_019435	0.78	+0.5
4,246,882	-		TX73_019435	0.82	-0.1
4,246,882	-		TX73_019435	0.82	+0.0
4,246,882	-		TX73_019435	0.82	+0.1
4,246,969	+		TX73_019435	0.85	+0.7
4,246,971	+		TX73_019435	0.85	-1.3
4,246,986	+		TX73_019435	0.86	+0.2
4,246,987	-		TX73_019435	0.86	+0.3
4,246,992	-		TX73_019435	0.86	-0.2
4,246,996	+		TX73_019435	0.86	+0.6
4,247,002	-		TX73_019435	0.86	-0.1
4,247,006	+		TX73_019435	0.87	+0.2
4,247,057	+		TX73_019435	0.89	-0.2
4,247,084	-		TX73_019435	0.90	-0.1
4,247,210	-				-0.1
4,247,210	-				+0.4
4,247,298	-				-1.1
4,247,298	-				+1.1
4,247,314	-				-0.1
4,247,361	+				-1.0
4,247,376	+				+0.6
4,247,381	+				+0.1
4,247,391	+				-0.4
4,247,399	-				-0.3
4,247,399	-				-0.2
4,247,445	+				+1.7
4,247,445	+				-0.6
4,247,452	+				-0.7
4,247,453	+				-0.8
4,247,496	-				-0.5
4,247,642	-				+0.7
4,247,660	+				+0.1
4,247,660	+				+0.0
4,247,668	-				-0.3
4,247,702	+				-0.3
4,247,761	+		TX73_019440	0.12	+1.8
4,247,768	+		TX73_019440	0.12	+0.4
4,247,768	+		TX73_019440	0.12	-0.2
4,247,768	+		TX73_019440	0.12	+0.3
4,247,769	-		TX73_019440	0.12	-0.5
4,247,776	-		TX73_019440	0.12	-0.5
4,247,776	-		TX73_019440	0.12	+0.0
4,247,776	-		TX73_019440	0.12	-2.1
4,247,776	-		TX73_019440	0.12	-0.2
4,247,776	-		TX73_019440	0.12	-1.2
4,247,776	-		TX73_019440	0.12	-1.3
4,247,776	-		TX73_019440	0.12	-0.0
4,247,844	-		TX73_019440	0.14	-0.2
4,247,853	+		TX73_019440	0.15	+0.1
4,247,871	+		TX73_019440	0.15	-0.5
4,247,875	+		TX73_019440	0.15	-0.4
4,248,026	+		TX73_019440	0.20	-0.1
4,248,047	-		TX73_019440	0.20	+0.8
4,248,080	+		TX73_019440	0.21	+0.7
4,248,088	-		TX73_019440	0.22	+1.1
4,248,088	-		TX73_019440	0.22	-0.1
4,248,090	-		TX73_019440	0.22	-0.2
4,248,106	+		TX73_019440	0.22	+0.5
4,248,106	+		TX73_019440	0.22	+0.1
4,248,106	+		TX73_019440	0.22	+0.6
4,248,106	+		TX73_019440	0.22	-0.2
4,248,106	+		TX73_019440	0.22	+0.4
4,248,106	+		TX73_019440	0.22	+0.3
4,248,174	+		TX73_019440	0.24	-1.0
4,248,208	+		TX73_019440	0.25	-0.1
4,248,218	+		TX73_019440	0.25	+0.3
4,248,226	-		TX73_019440	0.26	-0.6
4,248,231	-		TX73_019440	0.26	-0.7
4,248,266	-		TX73_019440	0.27	+0.6
4,248,296	+		TX73_019440	0.28	+0.2
4,248,300	+		TX73_019440	0.28	+0.5