Experiment: Citraconic (C); anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_000845 and TX73_000850 are separated by 138 nucleotides TX73_000850 and TX73_000855 are separated by 203 nucleotides
TX73_000845: TX73_000845 - GTPase ObgE, at 180,688 to 181,749
_000845
TX73_000850: TX73_000850 - glutamate 5-kinase, at 181,888 to 183,018
_000850
TX73_000855: TX73_000855 - glutamate-5-semialdehyde dehydrogenase, at 183,222 to 184,514
_000855
Position (kb) 181
182
183
184 Strain fitness (log2 ratio) -2
-1
0
1
2 at 181.662 kb on + strand at 181.686 kb on - strand at 181.720 kb on + strand at 181.722 kb on - strand at 181.722 kb on - strand at 181.725 kb on + strand at 181.725 kb on + strand at 181.725 kb on + strand at 181.725 kb on + strand at 181.725 kb on + strand at 181.725 kb on + strand at 181.725 kb on + strand at 181.725 kb on + strand at 181.733 kb on - strand at 181.733 kb on - strand at 181.743 kb on + strand at 181.753 kb on + strand at 181.767 kb on + strand at 181.767 kb on + strand at 181.767 kb on + strand at 181.775 kb on - strand at 181.813 kb on + strand at 181.818 kb on + strand at 181.821 kb on - strand at 181.821 kb on - strand at 181.826 kb on - strand at 181.831 kb on + strand at 181.839 kb on - strand at 181.844 kb on - strand at 181.853 kb on + strand at 181.864 kb on - strand at 181.885 kb on + strand at 181.893 kb on - strand at 183.020 kb on - strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.025 kb on + strand at 183.033 kb on - strand at 183.033 kb on - strand at 183.033 kb on - strand at 183.033 kb on - strand at 183.033 kb on - strand at 183.033 kb on - strand at 183.033 kb on - strand at 183.033 kb on - strand at 183.072 kb on + strand at 183.243 kb on + strand at 183.292 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Citraconic (C); anaerobic remove 181,662 + -0.9 181,686 - -0.1 181,720 + +0.4 181,722 - -1.1 181,722 - +0.6 181,725 + -0.1 181,725 + +1.8 181,725 + -0.1 181,725 + +0.6 181,725 + -0.9 181,725 + +0.4 181,725 + +0.6 181,725 + -1.0 181,733 - -0.1 181,733 - -0.2 181,743 + -0.1 181,753 + +0.0 181,767 + +0.2 181,767 + -0.0 181,767 + +1.1 181,775 - +0.2 181,813 + -0.3 181,818 + -0.7 181,821 - -0.4 181,821 - -0.4 181,826 - -2.5 181,831 + -0.3 181,839 - +0.1 181,844 - -0.9 181,853 + +0.2 181,864 - -0.5 181,885 + -1.1 181,893 - -0.4 183,020 - -0.0 183,025 + -0.4 183,025 + -0.3 183,025 + +0.3 183,025 + -0.4 183,025 + -1.2 183,025 + +0.4 183,025 + +0.0 183,025 + +0.1 183,025 + -0.1 183,025 + -0.1 183,033 - -0.6 183,033 - -0.3 183,033 - +0.0 183,033 - -1.3 183,033 - -0.5 183,033 - +0.4 183,033 - +0.8 183,033 - -0.8 183,072 + -1.2 183,243 + +0.7 183,292 - -0.3
Or see this region's nucleotide sequence