Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_022555

Experiment: Citraconic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citraconic (C); anaerobic
4,902,508	+				-0.3
4,902,537	+				-0.1
4,902,542	+				+0.2
4,902,578	-				+0.2
4,902,585	+				+0.2
4,902,585	+				-0.3
4,902,593	-				-0.8
4,902,593	-				+0.0
4,902,597	+				+0.9
4,902,599	-				+0.1
4,902,627	+				-0.4
4,902,627	+				-1.0
4,902,637	+				+0.7
4,902,637	+				+0.2
4,902,645	-				+1.5
4,902,646	+				+0.6
4,902,646	-				+0.4
4,902,648	+				+2.2
4,902,650	-				-1.2
4,902,654	-				-1.2
4,902,655	-				-0.1
4,902,656	+				+0.5
4,902,664	-		TX73_022545	0.11	+1.2
4,902,733	-		TX73_022545	0.27	+0.5
4,902,759	+		TX73_022545	0.33	+0.8
4,902,800	-		TX73_022545	0.42	-0.4
4,902,805	+		TX73_022545	0.43	-0.5
4,902,813	-		TX73_022545	0.45	+0.9
4,902,813	-		TX73_022545	0.45	-0.5
4,902,815	+		TX73_022545	0.46	-0.3
4,902,848	+		TX73_022545	0.53	-0.8
4,902,899	+		TX73_022545	0.65	-1.1
4,902,911	+		TX73_022545	0.67	-0.9
4,902,913	+		TX73_022545	0.68	-0.1
4,902,921	+		TX73_022545	0.70	-0.7
4,902,926	+		TX73_022545	0.71	-1.0
4,902,957	+		TX73_022545	0.78	+0.0
4,902,965	-		TX73_022545	0.80	+1.3
4,902,967	-		TX73_022545	0.80	-1.2
4,902,989	+		TX73_022545	0.85	+2.5
4,903,016	+				-0.0
4,903,018	+				-0.1
4,903,043	+				+1.1
4,903,048	+				-0.5
4,903,050	+				+0.1
4,903,066	-				-0.3
4,903,070	-				-1.0
4,903,093	-				-0.5
4,903,104	-				+0.4
4,903,114	-				+0.4
4,903,203	-				-0.4
4,903,231	+		TX73_022550	0.18	-2.0
4,903,231	+		TX73_022550	0.18	-0.2
4,903,236	+		TX73_022550	0.22	-0.3
4,903,244	-		TX73_022550	0.27	-0.9
4,903,253	+		TX73_022550	0.33	-0.4
4,903,253	+		TX73_022550	0.33	+0.2
4,903,253	+		TX73_022550	0.33	-0.2
4,903,259	-		TX73_022550	0.37	+0.1
4,903,259	-		TX73_022550	0.37	-0.1
4,903,259	-		TX73_022550	0.37	-0.7
4,903,261	-		TX73_022550	0.39	-0.3
4,903,261	-		TX73_022550	0.39	-1.1
4,903,261	-		TX73_022550	0.39	-0.1
4,903,280	-		TX73_022550	0.52	+1.1
4,903,290	-		TX73_022550	0.59	+0.2
4,903,325	-		TX73_022550	0.82	-0.2
4,903,327	+		TX73_022550	0.84	-0.3
4,903,344	-				-0.1
4,903,363	+				-0.4
4,903,363	+				+0.3
4,903,376	-				+0.6
4,903,376	-				+0.4
4,903,485	-				+0.4
4,903,485	-				+0.5
4,903,493	-				-0.0
4,903,496	+				-0.5
4,903,500	-				+0.0
4,903,552	+		TX73_022555	0.11	-0.2
4,903,555	-		TX73_022555	0.12	+0.8
4,903,567	+		TX73_022555	0.14	+0.9
4,903,575	-		TX73_022555	0.16	+0.8
4,903,589	+		TX73_022555	0.19	+0.4
4,903,589	-		TX73_022555	0.19	+0.9
4,903,591	+		TX73_022555	0.19	+0.6
4,903,632	+		TX73_022555	0.28	+1.2
4,903,632	+		TX73_022555	0.28	+1.0
4,903,632	+		TX73_022555	0.28	+0.6
4,903,632	+		TX73_022555	0.28	+0.3
4,903,632	+		TX73_022555	0.28	+0.5
4,903,640	-		TX73_022555	0.29	+0.9
4,903,640	-		TX73_022555	0.29	+0.7
4,903,640	-		TX73_022555	0.29	+0.3
4,903,640	-		TX73_022555	0.29	+1.3
4,903,640	-		TX73_022555	0.29	+0.8
4,903,650	-		TX73_022555	0.31	+0.6
4,903,650	-		TX73_022555	0.31	+0.8
4,903,650	-		TX73_022555	0.31	+0.8
4,903,667	+		TX73_022555	0.35	+1.9
4,903,668	+		TX73_022555	0.35	+0.7
4,903,672	+		TX73_022555	0.36	+1.0
4,903,680	-		TX73_022555	0.37	+0.4
4,903,686	-		TX73_022555	0.39	+0.5
4,903,686	-		TX73_022555	0.39	+0.9
4,903,691	-		TX73_022555	0.40	+0.7
4,903,691	-		TX73_022555	0.40	+1.5
4,903,730	-		TX73_022555	0.48	+0.3
4,903,766	-		TX73_022555	0.55	-0.7
4,903,779	+		TX73_022555	0.58	+0.3
4,903,781	+		TX73_022555	0.58	+0.3
4,903,786	+		TX73_022555	0.59	+0.4
4,903,786	+		TX73_022555	0.59	-0.1
4,903,787	+		TX73_022555	0.60	+0.8
4,903,787	-		TX73_022555	0.60	-0.0
4,903,808	+		TX73_022555	0.64	+0.7
4,903,866	+		TX73_022555	0.76	+1.1
4,903,889	-		TX73_022555	0.81	+0.2
4,903,889	-		TX73_022555	0.81	+0.6
4,903,901	+		TX73_022555	0.83	-0.0
4,903,901	+		TX73_022555	0.83	-0.8
4,903,902	+		TX73_022555	0.83	+0.4
4,903,909	-		TX73_022555	0.85	+0.8
4,903,938	+				+2.6
4,903,939	+				+0.5
4,904,063	-		TX73_022560	0.15	+0.2
4,904,067	+		TX73_022560	0.16	+0.4
4,904,067	+		TX73_022560	0.16	+1.1
4,904,067	+		TX73_022560	0.16	+0.2
4,904,091	+		TX73_022560	0.21	+0.1
4,904,118	-		TX73_022560	0.27	+0.2
4,904,128	+		TX73_022560	0.29	-0.1
4,904,139	-		TX73_022560	0.31	+1.1
4,904,162	-		TX73_022560	0.36	+0.7
4,904,162	-		TX73_022560	0.36	+0.6
4,904,170	-		TX73_022560	0.38	+1.3
4,904,193	+		TX73_022560	0.42	+0.5
4,904,217	+		TX73_022560	0.47	+0.3
4,904,230	+		TX73_022560	0.50	+1.0
4,904,242	+		TX73_022560	0.53	+0.9
4,904,248	+		TX73_022560	0.54	+0.9
4,904,250	-		TX73_022560	0.54	-0.1
4,904,257	+		TX73_022560	0.56	+0.3
4,904,275	+		TX73_022560	0.59	+1.4
4,904,343	+		TX73_022560	0.74	+0.9
4,904,344	+		TX73_022560	0.74	+0.5
4,904,374	-		TX73_022560	0.80	+0.5
4,904,402	-		TX73_022560	0.86	+0.9
4,904,414	+		TX73_022560	0.88	+0.6
4,904,415	+		TX73_022560	0.89	-0.3
4,904,415	+		TX73_022560	0.89	+1.6
4,904,416	-		TX73_022560	0.89	+1.1
4,904,423	-				-0.4
4,904,423	-				+0.2
4,904,423	-				+1.0
4,904,455	+				+1.5
4,904,479	-				-1.1
4,904,575	+				-0.3
4,904,616	-		TX73_022565	0.21	-0.2
4,904,616	-		TX73_022565	0.21	-0.3
4,904,616	-		TX73_022565	0.21	-1.0
4,904,616	-		TX73_022565	0.21	-0.2
4,904,616	-		TX73_022565	0.21	-0.0
4,904,709	-		TX73_022565	0.52	-0.3
4,904,720	+		TX73_022565	0.56	+0.0
4,904,733	-		TX73_022565	0.61	-0.3
4,904,733	-		TX73_022565	0.61	-0.2
4,904,733	-		TX73_022565	0.61	-0.2
4,904,733	-		TX73_022565	0.61	-0.4
4,904,736	+		TX73_022565	0.62	-0.8
4,904,754	-		TX73_022565	0.68	-0.2
4,904,826	+				-1.0
4,904,838	+				-0.8
4,904,880	-				-0.7
4,904,884	+				-0.9
4,904,902	+				+1.0
4,904,902	+				+0.1
4,904,910	-				+1.2
4,904,910	-				-0.5
4,904,913	+				-0.8
4,904,921	-				-0.3
4,904,923	+				-0.1
4,904,931	-				+1.2