Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_017045

Experiment: Citraconic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citraconic (C); anaerobic
3,716,643	+		TX73_017040	0.28	-0.2
3,716,643	+		TX73_017040	0.28	-0.8
3,716,651	-		TX73_017040	0.28	+0.3
3,716,663	+		TX73_017040	0.30	-1.3
3,716,663	+		TX73_017040	0.30	-0.2
3,716,671	-		TX73_017040	0.30	-0.3
3,716,683	+		TX73_017040	0.32	-0.7
3,716,714	+		TX73_017040	0.35	-0.4
3,716,722	-		TX73_017040	0.36	+0.2
3,716,738	-		TX73_017040	0.37	-0.3
3,716,764	+		TX73_017040	0.40	+0.1
3,716,794	-		TX73_017040	0.43	+0.5
3,716,814	+		TX73_017040	0.45	+0.2
3,716,867	-		TX73_017040	0.50	-0.9
3,716,869	+		TX73_017040	0.50	-1.1
3,716,885	-		TX73_017040	0.52	-1.6
3,716,887	+		TX73_017040	0.52	-0.6
3,716,914	+		TX73_017040	0.55	+1.1
3,716,937	-		TX73_017040	0.57	-0.3
3,716,954	+		TX73_017040	0.59	-0.6
3,716,978	-		TX73_017040	0.61	+0.9
3,716,980	+		TX73_017040	0.61	+0.7
3,716,988	-		TX73_017040	0.62	+0.7
3,717,011	+		TX73_017040	0.64	-1.8
3,717,095	+		TX73_017040	0.73	+0.4
3,717,133	+		TX73_017040	0.76	-2.1
3,717,141	-		TX73_017040	0.77	-1.3
3,717,160	+		TX73_017040	0.79	-0.8
3,717,189	-		TX73_017040	0.82	+0.1
3,717,238	+		TX73_017040	0.87	+0.3
3,717,246	-		TX73_017040	0.88	-0.3
3,717,271	+				+0.1
3,717,288	+				+0.4
3,717,289	+				+0.5
3,717,297	-				-0.3
3,717,299	+				-0.6
3,717,299	+				+0.7
3,717,309	+				-1.2
3,717,321	+				-0.7
3,717,321	+				+0.1
3,717,328	+				-0.3
3,717,336	-				-0.1
3,717,342	+				-0.8
3,717,381	+				-0.9
3,717,385	+				+0.6
3,717,393	-				+0.6
3,717,393	-				+0.3
3,717,408	-				-0.1
3,717,471	+				+0.1
3,717,510	+				+0.1
3,717,510	+				+0.3
3,717,548	+				-2.4
3,717,549	+				-0.6
3,717,556	+				+0.5
3,717,592	+				-0.7
3,717,605	-				-0.3
3,717,611	+				+0.0
3,717,636	-				+0.1
3,717,636	-				-0.9
3,717,732	-				-0.4
3,717,766	+		TX73_017045	0.11	-0.3
3,717,813	+		TX73_017045	0.14	+0.0
3,717,821	-		TX73_017045	0.15	+0.7
3,717,844	+		TX73_017045	0.17	+0.4
3,717,905	-		TX73_017045	0.21	-0.6
3,717,924	-		TX73_017045	0.23	+0.8
3,717,948	+		TX73_017045	0.24	-0.2
3,717,948	+		TX73_017045	0.24	-1.4
3,717,966	+		TX73_017045	0.26	+0.1
3,717,976	-		TX73_017045	0.26	+0.3
3,717,980	-		TX73_017045	0.27	+0.4
3,718,033	+		TX73_017045	0.31	-0.5
3,718,109	+		TX73_017045	0.36	+0.8
3,718,131	+		TX73_017045	0.38	+0.4
3,718,135	-		TX73_017045	0.38	+1.2
3,718,135	-		TX73_017045	0.38	-0.6
3,718,158	+		TX73_017045	0.40	-1.1
3,718,206	+		TX73_017045	0.43	-0.3
3,718,214	-		TX73_017045	0.44	+0.7
3,718,214	-		TX73_017045	0.44	+0.5
3,718,219	+		TX73_017045	0.44	+1.4
3,718,225	-		TX73_017045	0.45	+1.7
3,718,227	-		TX73_017045	0.45	-1.0
3,718,284	-		TX73_017045	0.49	-0.5
3,718,294	-		TX73_017045	0.50	-2.3
3,718,321	+		TX73_017045	0.52	-1.3
3,718,375	-		TX73_017045	0.56	-0.5
3,718,388	+		TX73_017045	0.57	-0.1
3,718,396	-		TX73_017045	0.58	-1.4
3,718,430	-		TX73_017045	0.60	+0.1
3,718,481	+		TX73_017045	0.64	-0.0
3,718,490	-		TX73_017045	0.64	-0.7
3,718,502	-		TX73_017045	0.65	-0.8
3,718,508	-		TX73_017045	0.66	+0.8
3,718,538	-		TX73_017045	0.68	+0.4
3,718,554	-		TX73_017045	0.69	-1.2
3,718,624	+		TX73_017045	0.74	-0.6
3,718,632	-		TX73_017045	0.75	-0.7
3,718,632	-		TX73_017045	0.75	-0.6
3,718,632	-		TX73_017045	0.75	+0.8
3,718,637	-		TX73_017045	0.75	+0.6
3,718,646	+		TX73_017045	0.76	-0.5
3,718,651	+		TX73_017045	0.76	+0.3
3,718,713	-		TX73_017045	0.81	-0.2
3,718,732	+		TX73_017045	0.82	+0.4
3,718,748	-		TX73_017045	0.84	+0.3
3,718,770	-		TX73_017045	0.85	-0.4
3,718,773	+		TX73_017045	0.85	-0.0
3,718,795	+		TX73_017045	0.87	-0.3
3,718,808	-		TX73_017045	0.88	-0.5
3,718,832	+		TX73_017045	0.90	-1.0
3,718,839	-				-0.7
3,718,839	-				+0.4
3,718,872	-				+0.9
3,718,895	-				-2.5
3,718,909	+				-0.4
3,718,919	+				+0.1
3,718,932	-				+0.2
3,718,936	+				+0.5
3,718,936	+				-0.5
3,718,944	-				-0.2
3,718,944	-				+0.1
3,718,944	-				+0.1
3,718,944	-				+0.3
3,718,974	-				-0.2
3,718,974	-				+1.1
3,719,012	+				-0.5
3,719,056	+				-0.5
3,719,080	+				+0.4
3,719,088	-				+0.2
3,719,088	-				-0.1
3,719,134	+				+1.1
3,719,310	-				-0.8
3,719,361	+				-0.8
3,719,383	-				-0.5
3,719,453	+				-0.2
3,719,462	-				+0.3
3,719,463	-				-0.9
3,719,471	+				-1.7
3,719,471	+				-0.2
3,719,471	+				-0.8
3,719,471	+				+0.5
3,719,472	-				+0.0
3,719,473	+				+0.2
3,719,479	-				-0.0
3,719,479	-				+0.8
3,719,481	-				+0.6
3,719,586	-		TX73_017050	0.12	-0.2
3,719,642	+		TX73_017050	0.16	-1.5
3,719,677	+		TX73_017050	0.19	+1.3
3,719,729	-		TX73_017050	0.23	-1.4
3,719,731	+		TX73_017050	0.23	+1.7
3,719,731	+		TX73_017050	0.23	-0.0
3,719,762	+		TX73_017050	0.25	-0.0
3,719,763	-		TX73_017050	0.25	+0.7
3,719,764	-		TX73_017050	0.25	+0.3
3,719,782	-		TX73_017050	0.26	+0.8
3,719,811	+		TX73_017050	0.28	-0.3
3,719,816	+		TX73_017050	0.29	-1.7
3,719,821	+		TX73_017050	0.29	+1.8
3,719,824	+		TX73_017050	0.29	+0.7
3,719,832	-		TX73_017050	0.30	+0.4
3,719,845	+		TX73_017050	0.31	+0.1
3,719,873	+		TX73_017050	0.33	+0.9
3,719,881	-		TX73_017050	0.34	-0.9
3,719,899	-		TX73_017050	0.35	+0.3
3,719,901	+		TX73_017050	0.35	+0.0
3,719,901	+		TX73_017050	0.35	-0.2
3,719,938	+		TX73_017050	0.38	-0.3
3,719,938	+		TX73_017050	0.38	-0.8
3,719,941	-		TX73_017050	0.38	+1.7
3,719,946	-		TX73_017050	0.38	+0.4
3,719,960	+		TX73_017050	0.39	+0.5
3,719,960	+		TX73_017050	0.39	-0.1