Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_016170

Experiment: Citraconic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citraconic (C); anaerobic
3,534,482	-		TX73_016160	0.80	-0.9
3,534,507	+		TX73_016160	0.81	-1.0
3,534,544	+		TX73_016160	0.82	-1.0
3,534,557	+		TX73_016160	0.83	+1.0
3,534,592	-		TX73_016160	0.84	-0.1
3,534,597	-		TX73_016160	0.85	-0.1
3,534,616	-		TX73_016160	0.85	+0.3
3,534,627	-		TX73_016160	0.86	-0.2
3,534,653	-		TX73_016160	0.87	-0.2
3,534,678	+		TX73_016160	0.88	+0.3
3,534,698	-		TX73_016160	0.89	+0.5
3,534,705	-		TX73_016160	0.89	+0.9
3,534,735	+				+0.3
3,534,735	+				-0.1
3,534,743	+				-0.2
3,534,807	+				-1.1
3,534,807	+				-0.9
3,534,815	-				-0.2
3,534,815	-				+0.7
3,534,815	-				-1.3
3,534,815	-				+0.1
3,534,820	-				-0.8
3,534,833	-				-0.3
3,534,857	-				+0.2
3,534,857	-				+0.2
3,534,879	+				-0.5
3,534,879	+				+0.0
3,534,893	+				-0.8
3,534,900	+				+0.1
3,534,978	-				+0.4
3,534,983	+				-0.0
3,534,991	-				-0.4
3,534,996	-				+0.9
3,535,024	-		TX73_016165	0.16	+0.4
3,535,067	-		TX73_016165	0.26	+0.6
3,535,095	+		TX73_016165	0.32	+0.0
3,535,097	+		TX73_016165	0.33	+0.8
3,535,097	+		TX73_016165	0.33	-0.3
3,535,105	-		TX73_016165	0.34	+0.6
3,535,105	-		TX73_016165	0.34	+0.4
3,535,105	-		TX73_016165	0.34	-0.5
3,535,105	-		TX73_016165	0.34	-0.1
3,535,128	+		TX73_016165	0.40	+0.7
3,535,129	+		TX73_016165	0.40	+0.6
3,535,136	-		TX73_016165	0.42	-1.1
3,535,136	-		TX73_016165	0.42	-0.5
3,535,138	+		TX73_016165	0.42	+0.2
3,535,141	-		TX73_016165	0.43	-0.2
3,535,170	-		TX73_016165	0.50	-0.4
3,535,192	+		TX73_016165	0.55	-1.8
3,535,203	-		TX73_016165	0.57	+0.0
3,535,206	-		TX73_016165	0.58	-0.2
3,535,253	-		TX73_016165	0.69	-0.6
3,535,271	+		TX73_016165	0.73	+0.8
3,535,280	-		TX73_016165	0.75	+0.2
3,535,281	-		TX73_016165	0.76	-0.8
3,535,318	-		TX73_016165	0.84	+0.2
3,535,357	+				-1.3
3,535,365	-				-0.6
3,535,380	-				+0.5
3,535,380	-				-1.7
3,535,420	+				+0.3
3,535,440	+				+0.3
3,535,478	-				+0.2
3,535,478	-				-0.1
3,535,481	+				-0.1
3,535,487	+				-0.4
3,535,489	-				-0.2
3,535,489	-				+0.3
3,535,523	-				+0.0
3,535,548	+		TX73_016170	0.12	+0.5
3,535,548	+		TX73_016170	0.12	-0.1
3,535,548	+		TX73_016170	0.12	-0.6
3,535,548	+		TX73_016170	0.12	+0.1
3,535,548	+		TX73_016170	0.12	+0.0
3,535,549	+		TX73_016170	0.12	-0.4
3,535,600	-		TX73_016170	0.19	-0.1
3,535,721	+		TX73_016170	0.35	-0.1
3,535,729	-		TX73_016170	0.36	+1.5
3,535,729	-		TX73_016170	0.36	-0.8
3,535,730	-		TX73_016170	0.36	+0.0
3,535,733	+		TX73_016170	0.37	+0.4
3,535,740	-		TX73_016170	0.38	-0.2
3,535,743	+		TX73_016170	0.38	+0.6
3,535,766	+		TX73_016170	0.41	+0.9
3,535,801	-		TX73_016170	0.46	-0.2
3,535,829	+		TX73_016170	0.49	+0.8
3,535,839	+		TX73_016170	0.51	+2.0
3,535,841	+		TX73_016170	0.51	+0.1
3,535,847	-		TX73_016170	0.52	-0.2
3,535,849	+		TX73_016170	0.52	-2.1
3,535,857	-		TX73_016170	0.53	-0.3
3,535,891	+		TX73_016170	0.58	-0.6
3,535,901	+		TX73_016170	0.59	+1.0
3,535,909	-		TX73_016170	0.60	+0.1
3,535,909	-		TX73_016170	0.60	-0.2
3,535,909	-		TX73_016170	0.60	-1.4
3,535,946	+		TX73_016170	0.65	+1.7
3,535,994	+		TX73_016170	0.71	+1.0
3,536,001	-		TX73_016170	0.72	+0.6
3,536,012	+		TX73_016170	0.74	+0.8
3,536,020	-		TX73_016170	0.75	-0.3
3,536,036	+		TX73_016170	0.77	-0.7
3,536,036	+		TX73_016170	0.77	+1.0
3,536,036	+		TX73_016170	0.77	+1.1
3,536,042	+		TX73_016170	0.78	-0.4
3,536,044	-		TX73_016170	0.78	-0.4
3,536,053	+		TX73_016170	0.79	-0.4
3,536,053	+		TX73_016170	0.79	+1.0
3,536,053	+		TX73_016170	0.79	-0.1
3,536,061	-		TX73_016170	0.80	+0.4
3,536,083	-		TX73_016170	0.83	+0.6
3,536,135	+				+0.3
3,536,154	-				-0.4
3,536,263	-				-0.2
3,536,311	-				-0.2
3,536,314	+				+0.4
3,536,337	+				-0.2
3,536,352	-				-1.1
3,536,363	+				-0.3
3,536,405	+		TX73_016175	0.13	+0.4
3,536,405	+		TX73_016175	0.13	-0.4
3,536,426	+		TX73_016175	0.15	+0.0
3,536,437	+		TX73_016175	0.15	-0.8
3,536,461	+		TX73_016175	0.17	+0.4
3,536,473	+		TX73_016175	0.18	-1.0
3,536,478	-		TX73_016175	0.19	+0.3
3,536,488	-		TX73_016175	0.19	-0.1
3,536,503	+		TX73_016175	0.21	-0.1
3,536,509	-		TX73_016175	0.21	-0.3
3,536,511	+		TX73_016175	0.21	+0.1
3,536,524	+		TX73_016175	0.22	-0.6
3,536,544	-		TX73_016175	0.24	+0.8
3,536,557	+		TX73_016175	0.25	+0.1
3,536,565	-		TX73_016175	0.26	-0.9
3,536,565	-		TX73_016175	0.26	-1.1
3,536,599	-		TX73_016175	0.28	-0.1
3,536,653	-		TX73_016175	0.33	-0.6
3,536,654	+		TX73_016175	0.33	+0.0
3,536,659	+		TX73_016175	0.33	-0.2
3,536,667	-		TX73_016175	0.34	+1.7
3,536,672	-		TX73_016175	0.34	+0.1
3,536,713	+		TX73_016175	0.38	-0.5
3,536,721	-		TX73_016175	0.38	+0.4
3,536,723	+		TX73_016175	0.38	-0.5
3,536,723	+		TX73_016175	0.38	+0.1
3,536,723	+		TX73_016175	0.38	-0.8
3,536,723	+		TX73_016175	0.38	-0.5
3,536,731	-		TX73_016175	0.39	+0.8
3,536,731	-		TX73_016175	0.39	+0.4
3,536,731	-		TX73_016175	0.39	-1.9
3,536,731	-		TX73_016175	0.39	-1.3
3,536,731	-		TX73_016175	0.39	+0.7
3,536,731	-		TX73_016175	0.39	-0.0
3,536,781	+		TX73_016175	0.43	+0.4
3,536,788	-		TX73_016175	0.44	-0.3
3,536,790	+		TX73_016175	0.44	+0.4
3,536,798	-		TX73_016175	0.44	+0.4
3,536,803	-		TX73_016175	0.45	-0.6
3,536,839	+		TX73_016175	0.48	-0.0
3,536,840	-		TX73_016175	0.48	+0.0
3,536,857	-		TX73_016175	0.49	+0.8
3,536,907	+		TX73_016175	0.53	+0.9
3,536,981	+		TX73_016175	0.59	-0.9
3,536,989	-		TX73_016175	0.60	+0.0
3,537,006	+		TX73_016175	0.61	-1.1
3,537,008	-		TX73_016175	0.61	-0.0
3,537,032	+		TX73_016175	0.63	+0.0
3,537,045	-		TX73_016175	0.64	-0.2
3,537,045	-		TX73_016175	0.64	+0.8
3,537,045	-		TX73_016175	0.64	+0.4
3,537,045	-		TX73_016175	0.64	-0.1
3,537,065	-		TX73_016175	0.66	-0.1
3,537,077	+		TX73_016175	0.67	-1.1
3,537,112	+		TX73_016175	0.69	-0.7
3,537,119	-		TX73_016175	0.70	+0.4
3,537,163	-		TX73_016175	0.74	+0.4