Experiment: Citraconic (C); anaerobic
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt TX73_014975 and TX73_014980 are separated by 36 nucleotides TX73_014980 and TX73_014985 are separated by 130 nucleotides TX73_014985 and TX73_014990 are separated by 10 nucleotides
TX73_014975: TX73_014975 - SurA N-terminal domain-containing protein, at 3,266,040 to 3,267,941
_014975
TX73_014980: TX73_014980 - anthranilate phosphoribosyltransferase, at 3,267,978 to 3,268,994
_014980
TX73_014985: TX73_014985 - indole-3-glycerol phosphate synthase TrpC, at 3,269,125 to 3,269,922
_014985
TX73_014990: TX73_014990 - cyclic pyranopterin monophosphate synthase MoaC, at 3,269,933 to 3,270,463
_014990
Position (kb)
3267
3268
3269 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3266.999 kb on + strand, within TX73_014975 at 3266.999 kb on + strand, within TX73_014975 at 3267.069 kb on + strand, within TX73_014975 at 3267.080 kb on + strand, within TX73_014975 at 3267.080 kb on + strand, within TX73_014975 at 3267.080 kb on + strand, within TX73_014975 at 3267.085 kb on + strand, within TX73_014975 at 3267.095 kb on + strand, within TX73_014975 at 3267.103 kb on - strand, within TX73_014975 at 3267.132 kb on + strand, within TX73_014975 at 3267.132 kb on + strand, within TX73_014975 at 3267.132 kb on + strand, within TX73_014975 at 3267.169 kb on - strand, within TX73_014975 at 3267.172 kb on - strand, within TX73_014975 at 3267.217 kb on - strand, within TX73_014975 at 3267.223 kb on - strand, within TX73_014975 at 3267.482 kb on + strand, within TX73_014975 at 3267.490 kb on - strand, within TX73_014975 at 3267.521 kb on + strand, within TX73_014975 at 3267.567 kb on + strand, within TX73_014975 at 3267.567 kb on + strand, within TX73_014975 at 3267.584 kb on + strand, within TX73_014975 at 3267.679 kb on + strand, within TX73_014975 at 3267.684 kb on + strand, within TX73_014975 at 3267.701 kb on + strand, within TX73_014975 at 3267.716 kb on + strand, within TX73_014975 at 3267.717 kb on + strand, within TX73_014975 at 3267.868 kb on + strand at 3267.872 kb on + strand at 3267.886 kb on + strand at 3267.889 kb on - strand at 3267.930 kb on + strand at 3268.989 kb on + strand at 3269.007 kb on + strand at 3269.007 kb on + strand at 3269.014 kb on - strand at 3269.015 kb on - strand at 3269.036 kb on - strand at 3269.053 kb on - strand at 3269.069 kb on - strand at 3269.099 kb on + strand at 3269.107 kb on - strand at 3269.113 kb on + strand at 3269.895 kb on - strand at 3269.910 kb on - strand at 3269.916 kb on + strand at 3269.935 kb on + strand at 3269.947 kb on + strand at 3269.963 kb on - strand at 3269.964 kb on - strand at 3269.964 kb on - strand at 3269.975 kb on + strand at 3269.976 kb on - strand at 3269.984 kb on - strand at 3269.994 kb on - strand, within TX73_014990
Per-strain Table
Position Strand Gene LocusTag Fraction Citraconic (C); anaerobic remove 3,266,999 + TX73_014975 0.50 +0.1 3,266,999 + TX73_014975 0.50 -2.3 3,267,069 + TX73_014975 0.54 -1.5 3,267,080 + TX73_014975 0.55 +1.3 3,267,080 + TX73_014975 0.55 -0.3 3,267,080 + TX73_014975 0.55 +0.3 3,267,085 + TX73_014975 0.55 +0.3 3,267,095 + TX73_014975 0.55 +3.7 3,267,103 - TX73_014975 0.56 -0.2 3,267,132 + TX73_014975 0.57 -0.9 3,267,132 + TX73_014975 0.57 +0.1 3,267,132 + TX73_014975 0.57 -0.1 3,267,169 - TX73_014975 0.59 +0.7 3,267,172 - TX73_014975 0.60 +1.3 3,267,217 - TX73_014975 0.62 -0.3 3,267,223 - TX73_014975 0.62 -0.5 3,267,482 + TX73_014975 0.76 +2.1 3,267,490 - TX73_014975 0.76 -0.9 3,267,521 + TX73_014975 0.78 -0.9 3,267,567 + TX73_014975 0.80 -0.7 3,267,567 + TX73_014975 0.80 -1.1 3,267,584 + TX73_014975 0.81 +1.1 3,267,679 + TX73_014975 0.86 -0.8 3,267,684 + TX73_014975 0.86 -0.5 3,267,701 + TX73_014975 0.87 +0.3 3,267,716 + TX73_014975 0.88 +0.1 3,267,717 + TX73_014975 0.88 +0.1 3,267,868 + +0.9 3,267,872 + +0.1 3,267,886 + +0.7 3,267,889 - -0.5 3,267,930 + +0.6 3,268,989 + -1.6 3,269,007 + -0.6 3,269,007 + -0.9 3,269,014 - +0.0 3,269,015 - -2.5 3,269,036 - -1.0 3,269,053 - -0.2 3,269,069 - -0.1 3,269,099 + +0.3 3,269,107 - +0.6 3,269,113 + +0.4 3,269,895 - +0.3 3,269,910 - -0.4 3,269,916 + -1.4 3,269,935 + +0.5 3,269,947 + +0.4 3,269,963 - -0.1 3,269,964 - +0.8 3,269,964 - -1.3 3,269,975 + -0.1 3,269,976 - +0.3 3,269,984 - +0.1 3,269,994 - TX73_014990 0.11 -0.1
Or see this region's nucleotide sequence