Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_014585

Experiment: Butyric Acid (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Butyric Acid (C); anaerobic
3,192,287	+		TX73_014580	0.69	-0.6
3,192,287	+		TX73_014580	0.69	+2.1
3,192,298	+		TX73_014580	0.70	+0.9
3,192,304	-		TX73_014580	0.70	-1.0
3,192,318	+		TX73_014580	0.70	+0.5
3,192,326	-		TX73_014580	0.71	+0.8
3,192,328	-		TX73_014580	0.71	+0.4
3,192,331	-		TX73_014580	0.71	+0.5
3,192,356	-		TX73_014580	0.72	+0.0
3,192,367	+		TX73_014580	0.72	+1.0
3,192,367	+		TX73_014580	0.72	+0.8
3,192,368	-		TX73_014580	0.72	-0.3
3,192,375	-		TX73_014580	0.72	+1.1
3,192,375	-		TX73_014580	0.72	-0.2
3,192,375	-		TX73_014580	0.72	+1.4
3,192,404	+		TX73_014580	0.73	-1.3
3,192,415	+		TX73_014580	0.74	+1.3
3,192,421	+		TX73_014580	0.74	+1.5
3,192,428	+		TX73_014580	0.74	+0.3
3,192,429	-		TX73_014580	0.74	-0.2
3,192,434	-		TX73_014580	0.74	+0.3
3,192,435	+		TX73_014580	0.74	+0.3
3,192,436	-		TX73_014580	0.74	-1.6
3,192,441	+		TX73_014580	0.74	+0.3
3,192,441	+		TX73_014580	0.74	+1.3
3,192,443	+		TX73_014580	0.75	+0.7
3,192,448	+		TX73_014580	0.75	+1.8
3,192,449	-		TX73_014580	0.75	-1.0
3,192,449	-		TX73_014580	0.75	+0.4
3,192,449	-		TX73_014580	0.75	-0.5
3,192,453	-		TX73_014580	0.75	+0.0
3,192,463	-		TX73_014580	0.75	-1.2
3,192,493	+		TX73_014580	0.76	+0.5
3,192,493	+		TX73_014580	0.76	+0.8
3,192,493	+		TX73_014580	0.76	+0.6
3,192,493	+		TX73_014580	0.76	-0.5
3,192,494	+		TX73_014580	0.76	+0.8
3,192,494	-		TX73_014580	0.76	+2.8
3,192,497	-		TX73_014580	0.76	-0.9
3,192,501	-		TX73_014580	0.76	+0.1
3,192,502	-		TX73_014580	0.76	-0.9
3,192,508	+		TX73_014580	0.77	+1.1
3,192,508	+		TX73_014580	0.77	+0.3
3,192,516	-		TX73_014580	0.77	+1.4
3,192,516	-		TX73_014580	0.77	-0.5
3,192,536	-		TX73_014580	0.78	+1.1
3,192,544	-		TX73_014580	0.78	-1.3
3,192,544	-		TX73_014580	0.78	-0.2
3,192,551	+		TX73_014580	0.78	-0.2
3,192,551	-		TX73_014580	0.78	+2.4
3,192,560	+		TX73_014580	0.78	-0.7
3,192,569	-		TX73_014580	0.79	+0.0
3,192,569	-		TX73_014580	0.79	+0.4
3,192,577	-		TX73_014580	0.79	-0.5
3,192,629	+		TX73_014580	0.81	-0.2
3,192,671	+		TX73_014580	0.82	-1.7
3,192,671	+		TX73_014580	0.82	-1.2
3,192,671	+		TX73_014580	0.82	-0.5
3,192,671	+		TX73_014580	0.82	+0.5
3,192,671	+		TX73_014580	0.82	+0.4
3,192,676	+		TX73_014580	0.82	+0.7
3,192,679	-		TX73_014580	0.82	-1.0
3,192,679	-		TX73_014580	0.82	-0.4
3,192,679	-		TX73_014580	0.82	-2.5
3,192,679	-		TX73_014580	0.82	+0.8
3,192,679	-		TX73_014580	0.82	-0.2
3,192,688	+		TX73_014580	0.83	+1.1
3,192,701	+		TX73_014580	0.83	+1.1
3,192,704	-		TX73_014580	0.83	-0.2
3,192,731	+		TX73_014580	0.84	+0.3
3,192,731	+		TX73_014580	0.84	+0.1
3,192,731	+		TX73_014580	0.84	+0.8
3,192,736	+		TX73_014580	0.84	-0.2
3,192,739	-		TX73_014580	0.84	-1.0
3,192,739	-		TX73_014580	0.84	+0.6
3,192,761	+		TX73_014580	0.85	-2.4
3,192,761	+		TX73_014580	0.85	-0.3
3,192,776	-		TX73_014580	0.86	+0.8
3,192,790	+		TX73_014580	0.86	+1.4
3,192,790	+		TX73_014580	0.86	-0.0
3,192,790	+		TX73_014580	0.86	+0.5
3,192,792	-		TX73_014580	0.86	+3.4
3,192,792	-		TX73_014580	0.86	+0.1
3,192,798	-		TX73_014580	0.86	+0.8
3,192,812	+		TX73_014580	0.87	-0.2
3,192,814	+		TX73_014580	0.87	-0.5
3,192,814	+		TX73_014580	0.87	-1.3
3,192,819	+		TX73_014580	0.87	+0.7
3,192,822	-		TX73_014580	0.87	-0.3
3,192,822	-		TX73_014580	0.87	+1.8
3,192,824	+		TX73_014580	0.87	+1.4
3,192,827	-		TX73_014580	0.87	-0.6
3,192,832	-		TX73_014580	0.87	+0.8
3,192,832	-		TX73_014580	0.87	-1.2
3,192,832	-		TX73_014580	0.87	+0.0
3,192,832	-		TX73_014580	0.87	+0.4
3,192,845	-		TX73_014580	0.88	-2.0
3,192,861	+		TX73_014580	0.88	+1.0
3,192,863	+		TX73_014580	0.88	+0.8
3,192,869	-		TX73_014580	0.89	+1.8
3,192,881	+		TX73_014580	0.89	-0.7
3,192,890	+		TX73_014580	0.89	+2.4
3,192,891	-		TX73_014580	0.89	+0.3
3,192,913	+				-0.1
3,192,924	+				-2.5
3,192,926	-				+0.8
3,192,937	+				+0.8
3,192,937	+				-1.0
3,192,945	-				+0.7
3,192,945	-				-1.9
3,192,955	-				-1.2
3,192,962	-				+0.3
3,192,966	+				-1.1
3,192,972	-				+1.2
3,192,973	-				-0.2
3,192,977	+				+0.6
3,192,977	+				+0.5
3,192,977	+				+0.5
3,192,979	+				+0.0
3,192,980	-				+0.3
3,192,980	-				+1.0
3,192,980	-				-0.6
3,192,985	-				-0.2
3,192,985	-				+2.2
3,192,987	-				+1.8
3,192,988	-				+0.5
3,193,006	+				+0.2
3,193,014	-				+0.8
3,193,014	-				+1.4
3,193,014	-				-0.9
3,193,016	+				+1.4
3,193,043	-				+1.1
3,193,095	+				-0.5
3,193,106	+				-0.7
3,193,106	+				+0.3
3,193,114	-				+0.6
3,193,121	+				+0.3
3,193,121	+				+0.3
3,193,121	+				+0.7
3,193,121	+				+1.3
3,193,121	+				+0.0
3,193,129	-				+0.5
3,193,129	-				-0.0
3,193,129	-				-0.2
3,193,129	-				-0.6
3,193,129	-				-1.5
3,193,129	-				-0.3
3,193,129	-				+0.3
3,193,129	-				+0.6
3,193,149	+				-0.0
3,193,151	+				+0.3
3,193,154	+				-0.3
3,193,157	-				-0.1
3,193,169	+				-0.2
3,193,177	-				+0.1
3,193,177	-				+0.2
3,193,179	+				-0.4
3,193,184	-				-0.5
3,193,184	-				-1.2
3,193,185	-				+0.6
3,193,201	-				+0.2
3,193,206	+				+0.3
3,193,206	+				-1.0
3,193,213	-				+0.1
3,193,214	-				+0.0
3,193,214	-				+0.6
3,193,222	+				+0.6
3,193,226	+				-0.9
3,193,226	+				-1.0
3,193,226	+				+0.1
3,193,226	+				-0.8
3,193,226	+				-0.1
3,193,226	+				+0.5
3,193,231	+				-0.2
3,193,234	-				+1.0
3,193,234	-				-0.8
3,193,234	-				-0.9
3,193,234	-				-0.6
3,193,234	-				+0.4
3,193,239	-				+2.8
3,193,239	-				+0.2
3,193,240	-				+0.2
3,193,242	+				-0.3
3,193,321	+				-0.4
3,193,330	-				-0.0
3,193,338	-				+0.5
3,193,339	-				+0.2
3,193,367	-		TX73_014585	0.13	-1.3
3,193,369	+		TX73_014585	0.13	-0.7
3,193,374	+		TX73_014585	0.14	+0.2
3,193,377	-		TX73_014585	0.14	+0.8
3,193,388	+		TX73_014585	0.16	-0.3
3,193,396	-		TX73_014585	0.17	-0.4
3,193,398	+		TX73_014585	0.17	-0.4
3,193,399	+		TX73_014585	0.17	+0.3
3,193,406	+		TX73_014585	0.18	-0.2
3,193,406	-		TX73_014585	0.18	+0.2
3,193,409	+		TX73_014585	0.18	-1.0
3,193,417	+		TX73_014585	0.19	-1.0
3,193,417	+		TX73_014585	0.19	+0.0
3,193,417	+		TX73_014585	0.19	-0.9
3,193,417	-		TX73_014585	0.19	-1.0
3,193,424	-		TX73_014585	0.20	+1.4
3,193,425	-		TX73_014585	0.20	-2.1
3,193,425	-		TX73_014585	0.20	+0.1
3,193,426	-		TX73_014585	0.20	-0.5
3,193,444	+		TX73_014585	0.23	-0.5
3,193,456	-		TX73_014585	0.24	+0.5
3,193,461	+		TX73_014585	0.25	-1.5
3,193,481	-		TX73_014585	0.28	-0.2
3,193,531	-		TX73_014585	0.34	-0.1
3,193,558	+		TX73_014585	0.37	-0.4
3,193,564	+		TX73_014585	0.38	-1.9
3,193,569	+		TX73_014585	0.39	-0.1
3,193,569	+		TX73_014585	0.39	+0.4
3,193,569	+		TX73_014585	0.39	-1.9
3,193,582	-		TX73_014585	0.41	-0.4
3,193,592	+		TX73_014585	0.42	+0.4
3,193,592	+		TX73_014585	0.42	+0.1
3,193,597	+		TX73_014585	0.43	-0.1
3,193,600	-		TX73_014585	0.43	-0.8
3,193,600	-		TX73_014585	0.43	-0.0
3,193,600	-		TX73_014585	0.43	-0.4
3,193,600	-		TX73_014585	0.43	+0.5
3,193,602	+		TX73_014585	0.43	+0.2
3,193,620	+		TX73_014585	0.45	-0.7
3,193,620	+		TX73_014585	0.45	+0.6
3,193,628	-		TX73_014585	0.47	-0.2
3,193,628	-		TX73_014585	0.47	+0.4
3,193,628	-		TX73_014585	0.47	+0.2
3,193,628	-		TX73_014585	0.47	+0.1
3,193,630	+		TX73_014585	0.47	-1.4
3,193,633	-		TX73_014585	0.47	-0.3
3,193,633	-		TX73_014585	0.47	+0.2
3,193,635	+		TX73_014585	0.47	-0.2
3,193,635	+		TX73_014585	0.47	-0.3
3,193,645	+		TX73_014585	0.49	-0.8
3,193,653	-		TX73_014585	0.50	-0.0
3,193,673	+		TX73_014585	0.52	+0.1
3,193,678	+		TX73_014585	0.53	-0.8
3,193,686	+		TX73_014585	0.54	+0.0
3,193,694	-		TX73_014585	0.55	-0.8
3,193,698	+		TX73_014585	0.56	-0.5
3,193,701	+		TX73_014585	0.56	+0.2
3,193,721	+		TX73_014585	0.59	-0.8
3,193,721	+		TX73_014585	0.59	-0.7
3,193,727	-		TX73_014585	0.59	-0.4
3,193,729	-		TX73_014585	0.60	+0.3
3,193,756	+		TX73_014585	0.63	-1.2
3,193,774	-		TX73_014585	0.65	-0.2
3,193,793	-		TX73_014585	0.68	+0.5
3,193,841	+		TX73_014585	0.74	-0.1
3,193,863	-		TX73_014585	0.77	+0.1
3,193,872	+		TX73_014585	0.78	-0.2
3,193,872	+		TX73_014585	0.78	+0.3
3,193,872	+		TX73_014585	0.78	+0.1
3,193,872	+		TX73_014585	0.78	+0.5
3,193,872	+		TX73_014585	0.78	-0.2
3,193,872	+		TX73_014585	0.78	+0.7
3,193,872	+		TX73_014585	0.78	-1.7
3,193,872	+		TX73_014585	0.78	+0.1
3,193,872	+		TX73_014585	0.78	+0.4
3,193,872	+		TX73_014585	0.78	-1.3
3,193,872	+		TX73_014585	0.78	-0.4
3,193,872	+		TX73_014585	0.78	-1.3
3,193,872	+		TX73_014585	0.78	+0.5
3,193,872	+		TX73_014585	0.78	-0.1
3,193,873	+		TX73_014585	0.78	+0.1
3,193,878	-		TX73_014585	0.79	+0.4
3,193,880	+		TX73_014585	0.79	+0.3
3,193,880	-		TX73_014585	0.79	+0.4
3,193,880	-		TX73_014585	0.79	-0.1
3,193,880	-		TX73_014585	0.79	+0.0
3,193,880	-		TX73_014585	0.79	-0.0
3,193,880	-		TX73_014585	0.79	-0.7
3,193,880	-		TX73_014585	0.79	-0.1
3,193,880	-		TX73_014585	0.79	-1.9
3,193,880	-		TX73_014585	0.79	+0.8
3,193,880	-		TX73_014585	0.79	+0.1
3,193,880	-		TX73_014585	0.79	-0.1
3,193,880	-		TX73_014585	0.79	+0.4
3,193,880	-		TX73_014585	0.79	-1.4
3,193,880	-		TX73_014585	0.79	+0.8
3,193,880	-		TX73_014585	0.79	-1.6
3,193,880	-		TX73_014585	0.79	+0.6
3,193,880	-		TX73_014585	0.79	-1.1
3,193,880	-		TX73_014585	0.79	-0.4
3,193,890	-		TX73_014585	0.80	+0.5
3,193,896	+		TX73_014585	0.81	+0.1
3,193,912	+		TX73_014585	0.83	+0.4
3,193,927	-		TX73_014585	0.85	-2.2
3,193,927	-		TX73_014585	0.85	+0.3
3,193,929	+		TX73_014585	0.85	-0.4
3,193,935	-		TX73_014585	0.86	+0.1
3,193,935	-		TX73_014585	0.86	+0.8
3,193,938	-		TX73_014585	0.87	-0.7
3,194,019	-				-1.7
3,194,024	+				+0.1
3,194,024	-				+0.8
3,194,031	+				+1.2
3,194,032	-				+0.7
3,194,049	+				-0.3
3,194,055	-				-0.3
3,194,055	-				-0.1
3,194,056	-				-0.5
3,194,072	+				-0.5
3,194,072	+				-0.1
3,194,080	-				+1.1
3,194,080	-				-0.0
3,194,080	-				+0.1
3,194,096	+				-0.2
3,194,096	+				+0.8
3,194,096	+				-1.2
3,194,136	-				+0.4
3,194,144	+				+0.3
3,194,148	-				-0.0
3,194,148	-				+0.1
3,194,163	-				-0.7
3,194,168	+				+0.9
3,194,168	+				+0.4
3,194,168	+				-0.3
3,194,173	+				-0.2
3,194,173	+				-0.3
3,194,173	+				+0.5
3,194,173	+				+0.6
3,194,173	+				+0.5
3,194,173	+				-0.9
3,194,173	+				+0.2
3,194,173	+				+0.0
3,194,173	+				-1.3
3,194,173	+				-0.8
3,194,173	+				-0.4
3,194,173	+				+0.7
3,194,173	+				-0.0
3,194,173	+				+0.5
3,194,181	-				+0.2
3,194,181	-				-0.7
3,194,181	-				+0.4
3,194,181	-				+0.4
3,194,181	-				+0.3
3,194,181	-				-0.9
3,194,181	-				-0.7
3,194,181	-				+0.1
3,194,181	-				-0.2
3,194,181	-				-0.6
3,194,181	-				+1.4
3,194,181	-				-0.3
3,194,184	+				-0.4
3,194,186	-				-0.8
3,194,191	+				-0.6
3,194,191	+				-0.4
3,194,191	-				+0.3
3,194,199	-				-0.4
3,194,221	+				-0.2
3,194,262	+				-0.7
3,194,264	-				-0.7
3,194,265	+				+0.1
3,194,267	+				-1.2
3,194,270	-				+0.2
3,194,299	+				+0.4
3,194,304	+				+0.0
3,194,327	-				-0.7
3,194,372	+				-0.2
3,194,379	+				+0.4
3,194,379	+				-0.2
3,194,380	-				+0.3
3,194,380	-				-0.4
3,194,381	+				-0.1
3,194,381	+				+0.1
3,194,381	+				-0.0
3,194,381	+				+0.8
3,194,381	+				-0.5
3,194,381	+				+0.6
3,194,381	+				+0.4
3,194,381	+				-0.6
3,194,381	+				-0.3
3,194,381	+				-0.5
3,194,381	-				-0.1
3,194,382	+				+0.3
3,194,389	+				-0.3
3,194,389	-				-1.2
3,194,389	-				+0.2
3,194,389	-				-1.0
3,194,389	-				+0.1
3,194,389	-				-0.2
3,194,389	-				+0.7
3,194,389	-				+0.6
3,194,389	-				+0.8
3,194,389	-				-0.3
3,194,389	-				-0.3
3,194,389	-				+0.8
3,194,389	-				+0.4
3,194,391	+				-0.1
3,194,391	-				-0.1
3,194,395	+				-0.5
3,194,399	-				+0.5
3,194,409	+				-0.3
3,194,422	-				+0.2
3,194,423	-				-0.3
3,194,423	-				-0.1
3,194,432	+				-0.7
3,194,496	+		TX73_014590	0.26	+0.8
3,194,499	-		TX73_014590	0.27	+0.0
3,194,504	-		TX73_014590	0.28	-0.3
3,194,504	-		TX73_014590	0.28	+0.2
3,194,512	-		TX73_014590	0.30	+0.3
3,194,516	+		TX73_014590	0.31	+1.0
3,194,516	+		TX73_014590	0.31	+0.8
3,194,524	-		TX73_014590	0.34	+0.0
3,194,524	-		TX73_014590	0.34	+0.1
3,194,527	-		TX73_014590	0.34	+1.0
3,194,532	+		TX73_014590	0.36	-0.6
3,194,540	-		TX73_014590	0.38	-0.3
3,194,545	-		TX73_014590	0.39	-1.2
3,194,555	-		TX73_014590	0.42	+1.2
3,194,558	-		TX73_014590	0.43	+0.3
3,194,575	-		TX73_014590	0.47	+0.6
3,194,586	+		TX73_014590	0.50	-0.2
3,194,592	-		TX73_014590	0.52	+0.7
3,194,608	-		TX73_014590	0.56	-0.4
3,194,613	-		TX73_014590	0.57	+0.3
3,194,621	-		TX73_014590	0.59	-0.3
3,194,659	+		TX73_014590	0.70	-0.5
3,194,664	+		TX73_014590	0.71	+0.4
3,194,669	+		TX73_014590	0.72	+0.1
3,194,669	+		TX73_014590	0.72	+0.2
3,194,672	-		TX73_014590	0.73	-0.1
3,194,714	+		TX73_014590	0.84	+3.8
3,194,714	+		TX73_014590	0.84	-1.4
3,194,722	-		TX73_014590	0.86	+0.4
3,194,722	-		TX73_014590	0.86	+0.2
3,194,722	-		TX73_014590	0.86	-1.5
3,194,724	+		TX73_014590	0.87	+0.6
3,194,724	+		TX73_014590	0.87	+1.2
3,194,726	+		TX73_014590	0.87	-0.4
3,194,732	+		TX73_014590	0.89	+0.4
3,194,732	-		TX73_014590	0.89	+0.5
3,194,737	-				-1.1
3,194,760	-				-0.3
3,194,783	+				-0.4
3,194,815	-				+0.3
3,194,826	+				-0.4
3,194,848	-		TX73_014595	0.16	-1.1
3,194,850	+		TX73_014595	0.17	-0.1
3,194,858	+		TX73_014595	0.19	-1.0
3,194,883	-		TX73_014595	0.26	+1.5
3,194,885	+		TX73_014595	0.26	-0.7
3,194,885	+		TX73_014595	0.26	-0.6
3,194,890	-		TX73_014595	0.28	-0.4
3,194,893	-		TX73_014595	0.28	-1.1
3,194,893	-		TX73_014595	0.28	-0.6
3,194,893	-		TX73_014595	0.28	-2.1
3,194,893	-		TX73_014595	0.28	-1.0
3,194,907	-		TX73_014595	0.32	+0.3
3,194,907	-		TX73_014595	0.32	+0.3
3,194,914	-		TX73_014595	0.34	+0.2
3,194,924	-		TX73_014595	0.37	-1.0
3,194,926	+		TX73_014595	0.37	-1.0
3,194,926	+		TX73_014595	0.37	+0.3
3,194,929	-		TX73_014595	0.38	-0.7
3,194,931	+		TX73_014595	0.39	+1.0
3,194,931	+		TX73_014595	0.39	+0.2
3,194,934	-		TX73_014595	0.40	+0.1
3,194,934	-		TX73_014595	0.40	+0.5
3,194,937	+		TX73_014595	0.40	+0.2
3,194,937	+		TX73_014595	0.40	-0.8
3,194,937	+		TX73_014595	0.40	-0.2
3,194,939	-		TX73_014595	0.41	-0.2
3,194,945	-		TX73_014595	0.43	-0.9
3,194,948	+		TX73_014595	0.44	-0.6
3,194,950	-		TX73_014595	0.44	+0.7
3,194,950	-		TX73_014595	0.44	-0.5
3,195,002	+		TX73_014595	0.58	+0.5
3,195,014	+		TX73_014595	0.62	+0.2
3,195,033	-		TX73_014595	0.67	-0.2
3,195,039	-		TX73_014595	0.69	-0.9