Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_011320

Experiment: Butyric Acid (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Butyric Acid (C); anaerobic
2,466,756	-		TX73_011315	0.37	-0.4
2,466,768	-		TX73_011315	0.38	+0.3
2,466,774	+		TX73_011315	0.39	+0.2
2,466,785	+		TX73_011315	0.40	-0.2
2,466,898	-		TX73_011315	0.49	-1.7
2,466,898	-		TX73_011315	0.49	-0.5
2,466,911	+		TX73_011315	0.50	-0.2
2,466,911	+		TX73_011315	0.50	+0.0
2,466,911	+		TX73_011315	0.50	-1.3
2,466,919	-		TX73_011315	0.51	+0.4
2,466,921	+		TX73_011315	0.51	-0.3
2,467,036	-		TX73_011315	0.60	-1.4
2,467,095	+		TX73_011315	0.65	+0.1
2,467,108	-		TX73_011315	0.66	+0.7
2,467,231	+		TX73_011315	0.76	-0.7
2,467,285	+		TX73_011315	0.81	-0.7
2,467,285	+		TX73_011315	0.81	-0.2
2,467,293	-		TX73_011315	0.81	+0.3
2,467,348	+		TX73_011315	0.86	+1.0
2,467,504	+				+0.1
2,467,512	-				-0.2
2,467,524	-				-0.7
2,467,529	-				+0.1
2,467,542	+				-0.9
2,467,550	-				-0.4
2,467,550	-				-0.2
2,467,711	-				-0.4
2,467,770	-				-0.4
2,467,770	-				+0.4
2,467,770	-				-0.6
2,467,770	-				+0.6
2,467,806	+				-0.0
2,467,861	+				-0.4
2,467,938	-				-0.9
2,467,981	+				+0.3
2,467,998	+		TX73_011320	0.10	+1.9
2,468,006	-		TX73_011320	0.11	+0.6
2,468,006	-		TX73_011320	0.11	-0.3
2,468,006	-		TX73_011320	0.11	+0.1
2,468,006	-		TX73_011320	0.11	+0.4
2,468,057	+		TX73_011320	0.13	-1.2
2,468,070	+		TX73_011320	0.13	+0.2
2,468,083	-		TX73_011320	0.14	-1.3
2,468,220	+		TX73_011320	0.20	-0.3
2,468,227	-		TX73_011320	0.20	-0.3
2,468,227	-		TX73_011320	0.20	+0.0
2,468,228	+		TX73_011320	0.20	-0.2
2,468,280	-		TX73_011320	0.22	+0.5
2,468,409	+		TX73_011320	0.28	+0.9
2,468,410	+		TX73_011320	0.28	+0.7
2,468,410	+		TX73_011320	0.28	-0.3
2,468,410	+		TX73_011320	0.28	+0.3
2,468,417	-		TX73_011320	0.28	-1.0
2,468,498	-		TX73_011320	0.31	-0.2
2,468,499	+		TX73_011320	0.31	+0.1
2,468,541	+		TX73_011320	0.33	-0.9
2,468,598	-		TX73_011320	0.36	+0.5
2,468,600	+		TX73_011320	0.36	+0.3
2,468,603	-		TX73_011320	0.36	-1.1
2,468,749	-		TX73_011320	0.42	+0.5
2,468,754	-		TX73_011320	0.42	-0.1
2,468,820	+		TX73_011320	0.45	-0.1
2,468,828	-		TX73_011320	0.45	+0.1
2,468,890	-		TX73_011320	0.48	+0.1
2,469,022	+		TX73_011320	0.53	+0.5
2,469,175	-		TX73_011320	0.60	-0.3
2,469,271	-		TX73_011320	0.64	+0.0
2,469,278	+		TX73_011320	0.64	-0.3
2,469,286	-		TX73_011320	0.65	+0.1
2,469,288	-		TX73_011320	0.65	-1.1
2,469,398	+		TX73_011320	0.69	+0.0
2,469,420	+		TX73_011320	0.70	+0.8
2,469,432	+		TX73_011320	0.71	+0.1
2,469,438	-		TX73_011320	0.71	+0.5
2,469,476	+		TX73_011320	0.73	-0.5
2,469,540	+		TX73_011320	0.75	+0.4
2,469,679	-		TX73_011320	0.81	-0.5
2,469,691	+		TX73_011320	0.82	-0.7
2,469,716	-		TX73_011320	0.83	-0.0
2,469,731	+		TX73_011320	0.83	+0.2
2,469,733	+		TX73_011320	0.83	+1.1
2,469,806	-		TX73_011320	0.86	+0.6
2,469,833	+		TX73_011320	0.88	+0.3
2,469,838	+		TX73_011320	0.88	-0.4
2,469,841	-		TX73_011320	0.88	-0.4
2,469,843	+		TX73_011320	0.88	-0.1
2,469,848	+		TX73_011320	0.88	+0.4
2,469,851	-		TX73_011320	0.88	-0.1
2,469,878	-		TX73_011320	0.89	-0.0
2,469,879	+		TX73_011320	0.90	-0.4
2,469,879	+		TX73_011320	0.90	-0.0
2,469,885	-		TX73_011320	0.90	-1.3
2,469,887	-		TX73_011320	0.90	-0.3
2,469,887	-		TX73_011320	0.90	+0.7
2,469,887	-		TX73_011320	0.90	-0.3
2,469,958	-				+0.4
2,469,973	+				-0.4
2,469,973	+				-1.4
2,469,973	+				-0.1
2,469,981	-				+0.6
2,469,981	-				-0.7
2,469,981	-				+0.4
2,469,981	-				-0.3
2,469,981	-				-0.6
2,469,981	-				+0.3
2,470,006	+				+0.4
2,470,014	-				+0.5
2,470,050	-				-0.1
2,470,056	+				+0.4
2,470,057	+				-0.2
2,470,067	+				+0.0
2,470,090	-				-0.2
2,470,090	-				-0.3
2,470,093	+				+1.2
2,470,095	+				+0.1
2,470,122	-				-0.4
2,470,127	-				-0.4
2,470,141	+				-0.2
2,470,144	-				+0.6
2,470,144	-				+0.4
2,470,163	+				-0.8
2,470,171	-				-0.8
2,470,196	+				-0.3
2,470,203	-				-0.1
2,470,244	+				+1.0
2,470,249	-				-0.8
2,470,252	-				-1.3
2,470,252	-				+0.2
2,470,272	+				-0.4
2,470,282	+				-2.1
2,470,285	-				-1.5
2,470,287	+				-0.4
2,470,288	+				-0.2
2,470,303	+				+0.5
2,470,342	+				+0.3
2,470,342	+				+1.1
2,470,350	-				+0.1
2,470,396	+				-0.6
2,470,414	+				-0.0
2,470,459	-				+0.7
2,470,484	-		TX73_011325	0.11	-0.1
2,470,486	+		TX73_011325	0.11	+1.6
2,470,486	+		TX73_011325	0.11	+0.4
2,470,494	-		TX73_011325	0.12	+0.1
2,470,494	-		TX73_011325	0.12	+0.4
2,470,494	-		TX73_011325	0.12	+0.1
2,470,495	-		TX73_011325	0.12	+1.9
2,470,502	-		TX73_011325	0.12	-1.0
2,470,518	+		TX73_011325	0.14	+0.0
2,470,538	-		TX73_011325	0.16	+0.2
2,470,538	-		TX73_011325	0.16	+0.5
2,470,545	-		TX73_011325	0.16	+0.7
2,470,552	-		TX73_011325	0.17	+0.4
2,470,593	-		TX73_011325	0.21	+2.6
2,470,601	+		TX73_011325	0.22	-0.1
2,470,601	+		TX73_011325	0.22	+0.0
2,470,601	+		TX73_011325	0.22	+0.6
2,470,611	+		TX73_011325	0.23	+0.5
2,470,611	+		TX73_011325	0.23	-0.5
2,470,632	-		TX73_011325	0.25	+0.2
2,470,666	-		TX73_011325	0.28	-0.4
2,470,668	+		TX73_011325	0.28	-0.4
2,470,700	-		TX73_011325	0.31	+0.9
2,470,764	+		TX73_011325	0.37	-0.4
2,470,794	-		TX73_011325	0.40	+0.9
2,470,829	+		TX73_011325	0.43	+0.7
2,470,842	-		TX73_011325	0.44	-0.1
2,470,872	-		TX73_011325	0.47	-0.8
2,470,877	-		TX73_011325	0.48	-0.8
2,470,889	+		TX73_011325	0.49	-0.0
2,470,907	-		TX73_011325	0.50	+0.5
2,470,907	-		TX73_011325	0.50	-0.0
2,470,916	+		TX73_011325	0.51	-0.3
2,470,918	+		TX73_011325	0.51	+1.3
2,470,926	-		TX73_011325	0.52	+0.5
2,470,994	-		TX73_011325	0.59	+0.6
2,471,022	+		TX73_011325	0.61	-1.5
2,471,030	+		TX73_011325	0.62	+0.0
2,471,030	-		TX73_011325	0.62	+0.5
2,471,032	-		TX73_011325	0.62	+0.5
2,471,059	-		TX73_011325	0.65	-0.1
2,471,065	-		TX73_011325	0.65	+0.2
2,471,079	+		TX73_011325	0.66	+0.5
2,471,079	+		TX73_011325	0.66	+0.5
2,471,079	+		TX73_011325	0.66	-0.3
2,471,089	+		TX73_011325	0.67	-0.9
2,471,109	+		TX73_011325	0.69	-0.3
2,471,109	+		TX73_011325	0.69	-0.7
2,471,117	+		TX73_011325	0.70	+0.2