Strain Fitness in Rhodopseudomonas palustris CGA009 around TX73_019955

Experiment: Azelaic (C); anaerobic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Azelaic (C); anaerobic
4,354,998	-				-0.2
4,355,003	-				-0.2
4,355,025	-				-0.0
4,355,043	-				+0.4
4,355,049	+				-0.6
4,355,057	-		TX73_019945	0.10	-0.3
4,355,097	+		TX73_019945	0.17	-0.4
4,355,100	-		TX73_019945	0.18	+0.5
4,355,149	-		TX73_019945	0.26	-0.2
4,355,161	-		TX73_019945	0.29	+1.2
4,355,169	-		TX73_019945	0.30	-0.7
4,355,169	-		TX73_019945	0.30	+0.4
4,355,192	-		TX73_019945	0.34	-0.3
4,355,195	+		TX73_019945	0.35	-1.3
4,355,244	-		TX73_019945	0.43	-0.1
4,355,307	+		TX73_019945	0.54	+1.2
4,355,312	-		TX73_019945	0.55	-0.1
4,355,370	-		TX73_019945	0.65	-0.0
4,355,378	+		TX73_019945	0.67	+0.1
4,355,386	-		TX73_019945	0.68	-0.5
4,355,393	+		TX73_019945	0.69	+0.5
4,355,419	+		TX73_019945	0.74	+0.9
4,355,461	-		TX73_019945	0.81	+1.0
4,355,507	+		TX73_019945	0.90	-0.4
4,355,517	-				-1.1
4,355,519	+				-1.4
4,355,532	-				-0.7
4,355,606	+				-0.1
4,355,606	+				-0.7
4,355,606	+				-1.2
4,355,649	+		TX73_019950	0.24	+1.0
4,355,649	+		TX73_019950	0.24	-0.1
4,355,657	-		TX73_019950	0.27	-1.8
4,355,657	-		TX73_019950	0.27	-0.1
4,355,657	-		TX73_019950	0.27	+0.5
4,355,657	-		TX73_019950	0.27	+0.6
4,355,681	+		TX73_019950	0.37	+0.1
4,355,690	-		TX73_019950	0.40	+0.2
4,355,694	+		TX73_019950	0.42	-0.5
4,355,694	+		TX73_019950	0.42	-0.6
4,355,736	+		TX73_019950	0.59	+0.8
4,355,736	+		TX73_019950	0.59	-0.9
4,355,741	+		TX73_019950	0.61	+0.1
4,355,790	+		TX73_019950	0.80	+0.4
4,355,814	-				-0.2
4,355,814	-				+0.7
4,355,833	+				-0.7
4,355,849	-				-0.6
4,355,856	+				+0.7
4,355,864	-				-0.8
4,355,930	+				+0.3
4,355,961	-				-0.2
4,355,995	-				+0.5
4,356,023	+				-1.2
4,356,036	+				-0.0
4,356,057	+				+1.2
4,356,065	-				+0.4
4,356,087	-				+0.1
4,356,101	+		TX73_019955	0.11	+0.1
4,356,106	+		TX73_019955	0.11	+0.7
4,356,151	+		TX73_019955	0.16	+0.0
4,356,158	-		TX73_019955	0.17	+0.7
4,356,203	+		TX73_019955	0.22	+0.3
4,356,206	-		TX73_019955	0.22	+0.2
4,356,213	+		TX73_019955	0.23	-0.2
4,356,251	-		TX73_019955	0.27	-0.1
4,356,252	+		TX73_019955	0.27	-0.7
4,356,252	+		TX73_019955	0.27	+0.0
4,356,252	+		TX73_019955	0.27	-0.0
4,356,252	+		TX73_019955	0.27	-1.2
4,356,260	-		TX73_019955	0.27	+0.6
4,356,350	+		TX73_019955	0.37	-1.0
4,356,350	+		TX73_019955	0.37	-0.4
4,356,361	+		TX73_019955	0.38	+0.9
4,356,366	+		TX73_019955	0.39	-0.4
4,356,369	-		TX73_019955	0.39	+0.3
4,356,407	+		TX73_019955	0.43	+0.5
4,356,415	-		TX73_019955	0.44	-0.4
4,356,415	-		TX73_019955	0.44	-1.0
4,356,415	-		TX73_019955	0.44	-0.5
4,356,431	+		TX73_019955	0.45	-0.0
4,356,439	-		TX73_019955	0.46	-0.6
4,356,439	-		TX73_019955	0.46	+0.2
4,356,496	+		TX73_019955	0.52	-0.7
4,356,531	+		TX73_019955	0.56	-0.1
4,356,562	+		TX73_019955	0.59	+0.5
4,356,596	+		TX73_019955	0.63	-1.6
4,356,604	-		TX73_019955	0.63	-0.6
4,356,604	-		TX73_019955	0.63	+0.5
4,356,604	-		TX73_019955	0.63	-1.4
4,356,604	-		TX73_019955	0.63	+1.2
4,356,613	-		TX73_019955	0.64	-0.2
4,356,615	+		TX73_019955	0.65	-0.7
4,356,623	-		TX73_019955	0.65	+0.8
4,356,623	-		TX73_019955	0.65	-0.2
4,356,699	+		TX73_019955	0.73	-0.4
4,356,727	+		TX73_019955	0.76	+0.4
4,356,735	-		TX73_019955	0.77	-0.3
4,356,747	-		TX73_019955	0.78	+0.1
4,356,747	-		TX73_019955	0.78	-0.7
4,356,798	-		TX73_019955	0.84	-0.5
4,356,798	-		TX73_019955	0.84	+1.0
4,356,798	-		TX73_019955	0.84	+0.2
4,356,808	-		TX73_019955	0.85	-0.6
4,356,817	-		TX73_019955	0.86	-0.0
4,356,821	+		TX73_019955	0.86	-0.3
4,356,829	-		TX73_019955	0.87	-0.6
4,356,896	+				-0.1
4,356,942	+				+0.2
4,356,942	+				+0.2
4,356,942	+				-1.8
4,356,950	-				-0.8
4,356,950	-				+0.5
4,356,950	-				+0.3
4,356,986	+		TX73_019960	0.44	-0.0
4,356,991	+		TX73_019960	0.46	+0.1
4,357,000	+		TX73_019960	0.50	-0.2
4,357,132	+				-0.4
4,357,143	+				-0.2
4,357,144	-				+0.7
4,357,177	-				-0.2
4,357,182	-				+0.2
4,357,192	+				-0.7
4,357,202	+		TX73_019965	0.13	+0.3
4,357,214	+		TX73_019965	0.17	-0.2
4,357,216	-		TX73_019965	0.17	+0.2
4,357,222	-		TX73_019965	0.19	+0.4
4,357,223	-		TX73_019965	0.19	-0.7
4,357,240	-		TX73_019965	0.25	-0.1
4,357,244	-		TX73_019965	0.26	-0.1
4,357,244	-		TX73_019965	0.26	-0.5
4,357,258	+		TX73_019965	0.30	+0.2
4,357,280	-		TX73_019965	0.37	-0.7
4,357,294	-		TX73_019965	0.41	+0.0
4,357,321	+		TX73_019965	0.50	+0.7
4,357,321	+		TX73_019965	0.50	-1.7
4,357,321	+		TX73_019965	0.50	-0.2
4,357,321	+		TX73_019965	0.50	+1.0
4,357,321	+		TX73_019965	0.50	-0.1
4,357,321	+		TX73_019965	0.50	+0.8
4,357,321	+		TX73_019965	0.50	-0.4
4,357,324	-		TX73_019965	0.51	-0.2
4,357,329	-		TX73_019965	0.52	-0.3
4,357,329	-		TX73_019965	0.52	+0.3
4,357,329	-		TX73_019965	0.52	-1.1
4,357,329	-		TX73_019965	0.52	-0.9
4,357,329	-		TX73_019965	0.52	-0.1
4,357,329	-		TX73_019965	0.52	+0.6
4,357,329	-		TX73_019965	0.52	+0.6
4,357,365	-		TX73_019965	0.64	-0.3
4,357,483	-				-0.4
4,357,514	-		TX73_019970	0.11	-0.2
4,357,525	+		TX73_019970	0.14	-0.7
4,357,560	+		TX73_019970	0.24	-1.0
4,357,560	+		TX73_019970	0.24	-0.2
4,357,562	+		TX73_019970	0.25	-0.6
4,357,570	-		TX73_019970	0.27	+1.2
4,357,570	-		TX73_019970	0.27	+0.0
4,357,570	-		TX73_019970	0.27	+0.4
4,357,570	-		TX73_019970	0.27	+0.2
4,357,607	-		TX73_019970	0.38	-0.8
4,357,694	+		TX73_019970	0.63	-0.3
4,357,715	+		TX73_019970	0.69	-0.4
4,357,733	-		TX73_019970	0.75	-0.5
4,357,750	+		TX73_019970	0.80	-0.3
4,357,753	+		TX73_019970	0.80	+0.4
4,357,757	-		TX73_019970	0.82	-0.1
4,357,768	+		TX73_019970	0.85	-0.5
4,357,788	-				-0.1
4,357,801	+				-0.9
4,357,801	-				-0.6
4,357,801	-				-0.1
4,357,808	+				-0.2
4,357,813	+				+0.1
4,357,816	-				-0.2
4,357,825	+				-0.3
4,357,838	-				+0.3
4,357,849	+				-0.9
4,357,948	-		TX73_019975	0.14	+0.2
4,357,948	-		TX73_019975	0.14	+0.5